| SRR358795 | callus | wt | 37.77 | HC |
| SRR358796 | callus | wt | 40.27 | HC |
| SRR358797 | callus | wt | 55.81 | HC |
| SRR358798 | callus | wt | 57.50 | HC |
| SRR5560727 | caryopsis | wild_type | 17.40 | HC |
| SRR5560728 | caryopsis | wild_type | 8.73 | HC |
| SRR5560729 | caryopsis | wild_type | 13.44 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 6.40 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 6.02 | HC |
| SRR7265373 | embryo | dry seed 0 h | 10.89 | HC |
| SRR7265374 | embryo | dry seed 0 h | 8.92 | HC |
| SRR7265375 | embryo | dry seed 0 h | 2.69 | HC |
| SRR7265376 | embryo | 1hA | 10.12 | HC |
| SRR7265377 | embryo | 1hA | 9.99 | HC |
| SRR7265378 | embryo | 1hA | 6.33 | HC |
| SRR7265379 | embryo | 1hN | 5.00 | HC |
| SRR7265380 | embryo | 1hN | 10.91 | HC |
| SRR7265381 | embryo | 1hN | 11.67 | HC |
| SRR7265382 | embryo | 3hA | 8.18 | HC |
| SRR7265383 | embryo | 3hA | 7.35 | HC |
| SRR7265384 | embryo | 3hA | 6.92 | HC |
| SRR7265385 | embryo | 3hN | 8.19 | HC |
| SRR7265386 | embryo | 3hN | 10.06 | HC |
| SRR7265387 | embryo | 3hN | 10.92 | HC |
| SRR2338866 | endosprem | control | 7.94 | HC |
| SRR2338867 | endosprem | control | 6.76 | HC |
| SRR2338868 | endosprem | high_temperature | 14.72 | HC |
| SRR2338869 | endosprem | high_temperature | 22.54 | HC |
| SRR8240825 | leaf | wild_type | 3.22 | HC |
| SRR8240826 | leaf | wild_type | 2.85 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 5.22 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 5.30 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 6.33 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 5.10 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 8.81 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 9.81 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 4.07 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 7.55 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 6.19 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 9.83 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 9.43 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 11.28 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 4.13 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 5.35 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 8.75 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 7.86 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 6.09 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 23.23 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 41.84 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 20.77 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 23.93 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 23.31 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 41.50 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 19.99 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 23.23 | HC |
| SRR1761528 | leaf | drought | 23.63 | HC |
| SRR1761529 | leaf | drought | 41.43 | HC |
| SRR1761530 | leaf | control | 20.55 | HC |
| SRR1761531 | leaf | control | 23.37 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 5.20 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 3.66 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 57.44 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 50.06 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 43.77 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 27.27 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 4.28 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 35.54 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 89.46 | HC |
| SRR8611900 | leaf | Non-inoculated | 5.70 | HC |
| SRR8611901 | leaf | Non-inoculated | 3.73 | HC |
| SRR8611902 | leaf | Non-inoculated | 5.80 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 7.53 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 5.69 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 5.90 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 3.72 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 4.58 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 6.86 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 10.50 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 15.89 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 14.12 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 16.77 | HC |
| SRR6168973 | leaf | none (control) | 6.22 | HC |
| SRR6168974 | leaf | none (control) | 7.93 | HC |
| SRR6168975 | leaf | none (control) | 9.48 | HC |
| SRR8582888 | panicle | AM | 18.88 | HC |
| SRR8582889 | panicle | AM | 9.14 | HC |
| SRR8582890 | panicle | AM | 14.03 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 11.17 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 28.72 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 7.84 | HC |
| SRR6441554 | seedling | wild_type | 5.97 | HC |
| SRR6441555 | seedling | wild_type | 5.66 | HC |
| SRR2154086 | seedling | wt | 5.00 | HC |
| SRR2154085 | seedling | wt | 4.62 | HC |
| SRR3098742 | seedling | wt | 2.90 | HC |
| SRR2857721 | seedling | drought_stress_6h | 9.29 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 7.86 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 9.52 | HC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 15.11 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 11.11 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 10.79 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 8.79 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 7.62 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 3.82 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 13.74 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 7.42 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 9.42 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 9.84 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 7.87 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 7.61 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 5.20 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 6.57 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 11.18 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 11.71 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 12.89 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 11.12 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 7.68 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 9.11 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.96 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 4.48 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 3.40 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 8.80 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 10.52 | HC |