| SRR4457251 | 2nd_leaf | DAH4 | 4.66 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 5.06 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 4.87 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 3.84 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 5.55 | HC |
| SRR4457256 | 2nd_leaf | DAH20 | 5.02 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 6.01 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 6.56 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 4.76 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 6.07 | HC |
| SRR358798 | callus | wt | 10.93 | HC |
| SRR6320473 | carpel | wt | 22.34 | HC |
| SRR6320498 | carpel | wt | 21.50 | HC |
| SRR5560728 | caryopsis | wild_type | 5.40 | HC |
| SRR5560729 | caryopsis | wild_type | 6.88 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 7.96 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 7.41 | HC |
| SRR7265400 | coleoptile | 2dA | 8.60 | HC |
| SRR7265401 | coleoptile | 2dA | 8.31 | HC |
| SRR7265402 | coleoptile | 2dA | 7.28 | HC |
| SRR7265403 | coleoptile | 2dN | 7.46 | HC |
| SRR7265404 | coleoptile | 2dN | 6.90 | HC |
| SRR7265405 | coleoptile | 2dN | 6.50 | HC |
| SRR7265406 | coleoptile | 3dA | 5.01 | HC |
| SRR7265407 | coleoptile | 3dA | 5.80 | HC |
| SRR7265408 | coleoptile | 3dA | 3.43 | HC |
| SRR7265409 | coleoptile | 3dN | 7.31 | HC |
| SRR7265410 | coleoptile | 3dN | 6.69 | HC |
| SRR7265411 | coleoptile | 3dN | 5.58 | HC |
| SRR7265412 | coleoptile | 4dA | 4.04 | HC |
| SRR7265413 | coleoptile | 4dA | 6.29 | HC |
| SRR7265414 | coleoptile | 4dA | 5.18 | HC |
| SRR7265415 | coleoptile | 4dN | 7.42 | HC |
| SRR7265416 | coleoptile | 4dN | 5.41 | HC |
| SRR7265417 | coleoptile | 4dN | 6.01 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 5.97 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 6.38 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 5.51 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 4.54 | HC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 4.75 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 4.35 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 3.96 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 4.89 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 4.87 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 4.98 | HC |
| SRR7265373 | embryo | dry seed 0 h | 11.22 | HC |
| SRR7265374 | embryo | dry seed 0 h | 11.98 | HC |
| SRR7265375 | embryo | dry seed 0 h | 3.53 | HC |
| SRR7265376 | embryo | 1hA | 9.18 | HC |
| SRR7265377 | embryo | 1hA | 10.06 | HC |
| SRR7265378 | embryo | 1hA | 10.73 | HC |
| SRR7265379 | embryo | 1hN | 9.78 | HC |
| SRR7265380 | embryo | 1hN | 7.99 | HC |
| SRR7265381 | embryo | 1hN | 8.62 | HC |
| SRR7265382 | embryo | 3hA | 14.55 | HC |
| SRR7265383 | embryo | 3hA | 13.48 | HC |
| SRR7265384 | embryo | 3hA | 13.51 | HC |
| SRR7265385 | embryo | 3hN | 9.94 | HC |
| SRR7265386 | embryo | 3hN | 8.72 | HC |
| SRR7265387 | embryo | 3hN | 8.23 | HC |
| SRR7265388 | embryo | 12hA | 8.22 | HC |
| SRR7265389 | embryo | 12hA | 11.23 | HC |
| SRR7265390 | embryo | 12hA | 9.21 | HC |
| SRR7265391 | embryo | 12hN | 12.87 | HC |
| SRR7265392 | embryo | 12hN | 10.24 | HC |
| SRR7265393 | embryo | 12hN | 11.67 | HC |
| SRR7265394 | embryo | 24hA | 10.66 | HC |
| SRR7265395 | embryo | 24hA | 11.42 | HC |
| SRR7265396 | embryo | 24hA | 10.85 | HC |
| SRR7265397 | embryo | 24hN | 10.68 | HC |
| SRR7265398 | embryo | 24hN | 10.01 | HC |
| SRR7265399 | embryo | 24hN | 10.28 | HC |
| SRR2338866 | endosprem | control | 6.40 | HC |
| SRR2338868 | endosprem | high_temperature | 3.34 | HC |
| SRR2338869 | endosprem | high_temperature | 6.36 | HC |
| SRR4457232 | flag_leaf | DAH4 | 4.51 | HC |
| SRR4457233 | flag_leaf | DAH4 | 4.30 | HC |
| SRR4457234 | flag_leaf | DAH12 | 3.98 | HC |
| SRR4457235 | flag_leaf | DAH12 | 3.59 | HC |
| SRR4457236 | flag_leaf | DAH12 | 3.77 | HC |
| SRR4457237 | flag_leaf | DAH20 | 4.10 | HC |
| SRR4457238 | flag_leaf | DAH20 | 4.67 | HC |
| SRR4457239 | flag_leaf | DAH20 | 4.41 | HC |
| SRR4457242 | flag_leaf | DAH28 | 5.37 | HC |
| SRR4457243 | flag_leaf | DAH36 | 5.35 | HC |
| SRR4457244 | flag_leaf | DAH36 | 5.16 | HC |
| SRR4457245 | flag_leaf | DAH36 | 5.92 | HC |
| SRR4457246 | flag_leaf | DAH44 | 4.68 | HC |
| SRR4457247 | flag_leaf | DAH44 | 5.61 | HC |
| SRR1213690 | flower | wt(flower buds) | 5.92 | HC |
| SRR1213691 | flower | wt | 5.63 | HC |
| SRR8060835 | leaf | wild_type | 3.35 | HC |
| SRR8060836 | leaf | wild_type | 3.97 | HC |
| SRR8060837 | leaf | wild_type | 3.83 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 5.03 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 7.25 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 8.78 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 11.24 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 11.87 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 14.09 | HC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 10.89 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 13.26 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 9.55 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 11.36 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 13.05 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 7.88 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 11.94 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 9.98 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 11.83 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 10.19 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 13.48 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 7.92 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 11.32 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 8.07 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 9.53 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 11.13 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 10.57 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 9.88 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 9.41 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 10.31 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 11.89 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 13.80 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 12.72 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 13.68 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 13.32 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 14.86 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 9.01 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 12.72 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 10.02 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 9.09 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 8.95 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 8.33 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 16.79 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 11.21 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 16.79 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 11.21 | HC |
| SRR1761528 | leaf | drought | 16.79 | HC |
| SRR1761529 | leaf | drought | 11.21 | HC |
| SRR504365 | leaf | wt | 5.94 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 6.78 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 5.82 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 4.43 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 4.23 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 9.42 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 7.14 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 4.99 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 5.07 | HC |
| SRR8611901 | leaf | Non-inoculated | 3.83 | HC |
| SRR8611902 | leaf | Non-inoculated | 3.60 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 5.53 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 4.65 | HC |
| SRR1213692 | leaf | wt | 5.70 | HC |
| SRR1213693 | leaf | wt | 10.08 | HC |
| SRR6502089 | leaf | control | 5.09 | HC |
| SRR6502090 | leaf | control | 4.39 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 6.23 | HC |
| SRR5856927 | leaf | control | 2.78 | HC |
| SRR5856928 | leaf | control | 3.55 | HC |
| SRR5856929 | leaf | control | 2.73 | HC |
| SRR5856930 | leaf | salt | 2.55 | HC |
| SRR5856931 | leaf | salt | 2.59 | HC |
| SRR5856932 | leaf | salt | 2.10 | HC |
| SRR5856933 | leaf | control | 3.56 | HC |
| SRR5856934 | leaf | control | 3.81 | HC |
| SRR5856935 | leaf | control | 3.63 | HC |
| SRR5856936 | leaf | salt | 2.46 | HC |
| SRR5856937 | leaf | salt | 3.22 | HC |
| SRR5856938 | leaf | salt | 3.46 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 3.26 | HC |
| SRR6168979 | leaf | none (control) | 4.12 | HC |
| SRR6168980 | leaf | none (control) | 3.19 | HC |
| SRR6168981 | leaf | none (control) | 3.17 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 4.13 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 2.71 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 4.42 | HC |
| SRR8582888 | panicle | AM | 7.00 | HC |
| SRR8582889 | panicle | AM | 2.04 | HC |
| SRR8582890 | panicle | AM | 3.63 | HC |
| SRR5110429 | panicle | Dawn | 6.99 | HC |
| SRR5110430 | panicle | Dawn | 6.74 | HC |
| SRR5110431 | panicle | Dawn | 7.45 | HC |
| SRR5110432 | panicle | Dawn | 4.61 | HC |
| SRR5110433 | panicle | Dawn + 3.5h | 7.47 | HC |
| SRR5110434 | panicle | Dawn + 3.5h | 5.53 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 5.80 | HC |
| SRR5110436 | panicle | Dawn + 3.5h | 4.89 | HC |
| SRR5110437 | panicle | Dawn + 7h | 6.54 | HC |
| SRR5110438 | panicle | Dawn + 7h | 7.82 | HC |
| SRR5110440 | panicle | Dawn + 7h | 9.22 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 4.67 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 4.71 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 6.77 | HC |
| SRR5110445 | panicle | Dusk | 5.61 | HC |
| SRR5110448 | panicle | Dusk | 7.20 | HC |
| SRR5110451 | panicle | Dawn + 14h | 4.40 | HC |
| SRR5110455 | panicle | Dawn + 17.5h | 4.66 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 6.28 | HC |
| SRR5110457 | panicle | Dawn + 21h | 5.38 | HC |
| SRR5110458 | panicle | Dawn + 21h | 4.29 | HC |
| SRR5110459 | panicle | Dawn + 21h | 4.69 | HC |
| SRR5110460 | panicle | Dawn + 21h | 8.09 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 2.79 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 5.59 | HC |
| SRR1633182 | panicle | WT | 10.66 | HC |
| SRR1633185 | panicle | WT | 14.58 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 4.37 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 5.62 | HC |
| SRR5126147 | root | "mock,1_day" | 8.10 | HC |
| SRR5126148 | root | "mock,1_day" | 7.54 | HC |
| SRR5126149 | root | "mock,1_day" | 7.70 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 7.44 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 8.73 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 9.19 | HC |
| SRR5126153 | root | "mock,7_days" | 7.75 | HC |
| SRR5126157 | root | "mock,7_days" | 9.09 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 6.70 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 10.46 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 7.41 | HC |
| SRR5126165 | root | "mock,14_days" | 7.27 | HC |
| SRR5126167 | root | "mock,14_days" | 4.86 | HC |
| SRR5126169 | root | "mock,14_days" | 6.38 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 8.32 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 7.43 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 7.56 | HC |
| SRR1213695 | root | wt | 9.86 | HC |
| SRR6502091 | root | 100 mM NaCl | 6.55 | HC |
| SRR6502092 | root | 100 mM NaCl | 6.18 | HC |
| SRR6502103 | root | 100 mM NaCl | 7.78 | HC |
| SRR6502104 | root | 100 mM NaCl | 7.07 | HC |
| SRR6502105 | root | 100 mM NaCl | 6.39 | HC |
| SRR6502106 | root | control | 4.53 | HC |
| SRR6502107 | root | control | 4.46 | HC |
| SRR6502108 | root | control | 8.36 | HC |
| SRR1740436 | root_differentiation_zone | wt | 3.92 | HC |
| SRR1740432 | root_elongation_zone | wt | 6.26 | HC |
| SRR1740433 | root_elongation_zone | wt | 4.30 | HC |
| SRR1740429 | root_meristematic_zone | wt | 3.90 | HC |
| SRR1740430 | root_meristematic_zone | wt | 4.99 | HC |
| SRR2154086 | seedling | wt | 4.72 | HC |
| SRR2154082 | seedling | wt | 4.96 | HC |
| SRR2154083 | seedling | wt | 5.54 | HC |
| SRR2154084 | seedling | wt | 6.08 | HC |
| SRR2154085 | seedling | wt | 5.93 | HC |
| SRR2154087 | seedling | wt | 7.24 | HC |
| SRR3098741 | seedling | wt | 3.69 | HC |
| SRR3098742 | seedling | wt | 3.25 | HC |
| SRR3098743 | seedling | wt | 4.06 | HC |
| SRR2857719 | seedling | drought_stress_0h | 6.56 | HC |
| SRR2857720 | seedling | drought_stress_1h | 6.70 | HC |
| SRR2857721 | seedling | drought_stress_6h | 11.52 | HC |
| SRR358791 | seedling | wt | 9.50 | HC |
| SRR358792 | seedling | wt | 10.01 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 4.01 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.52 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 6.41 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 3.83 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 5.13 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 5.29 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 5.02 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 5.01 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 3.04 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 3.52 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 3.19 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 4.39 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 4.08 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 5.44 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 5.74 | HC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 5.85 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 7.54 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 9.02 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 9.91 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 8.34 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 8.79 | HC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 7.82 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 5.12 | HC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 9.20 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 6.83 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 7.91 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 6.18 | HC |