| SRR4457252 | 2nd_leaf | DAH12 | 3.77 | HC |
| SRR4457256 | 2nd_leaf | DAH20 | 5.46 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 6.48 | HC |
| SRR4457266 | 2nd_leaf | DAH44 | 6.73 | HC |
| SRR6320473 | carpel | wt | 7.66 | HC |
| SRR6320498 | carpel | wt | 12.24 | HC |
| SRR7265400 | coleoptile | 2dA | 4.04 | HC |
| SRR7265405 | coleoptile | 2dN | 5.81 | HC |
| SRR7265406 | coleoptile | 3dA | 3.99 | HC |
| SRR7265409 | coleoptile | 3dN | 4.38 | HC |
| SRR7265410 | coleoptile | 3dN | 8.94 | HC |
| SRR7265411 | coleoptile | 3dN | 14.65 | HC |
| SRR7265413 | coleoptile | 4dA | 7.89 | HC |
| SRR7265416 | coleoptile | 4dN | 15.79 | HC |
| SRR7265417 | coleoptile | 4dN | 17.50 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 4.84 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 4.98 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 7.57 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 4.79 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 4.98 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 5.02 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 4.07 | HC |
| SRR7265379 | embryo | 1hN | 4.32 | HC |
| SRR7265382 | embryo | 3hA | 11.87 | HC |
| SRR7265383 | embryo | 3hA | 4.93 | HC |
| SRR7265387 | embryo | 3hN | 3.92 | HC |
| SRR7265388 | embryo | 12hA | 8.35 | HC |
| SRR7265389 | embryo | 12hA | 6.11 | HC |
| SRR7265390 | embryo | 12hA | 12.62 | HC |
| SRR7265391 | embryo | 12hN | 11.01 | HC |
| SRR7265393 | embryo | 12hN | 9.89 | HC |
| SRR7265396 | embryo | 24hA | 12.47 | HC |
| SRR7265397 | embryo | 24hN | 7.09 | HC |
| SRR7265398 | embryo | 24hN | 6.88 | HC |
| SRR7265399 | embryo | 24hN | 13.90 | HC |
| SRR2338867 | endosprem | control | 3.17 | HC |
| SRR2338868 | endosprem | high_temperature | 4.47 | HC |
| SRR2338869 | endosprem | high_temperature | 10.95 | HC |
| SRR4457236 | flag_leaf | DAH12 | 4.10 | HC |
| SRR4457237 | flag_leaf | DAH20 | 7.19 | HC |
| SRR4457239 | flag_leaf | DAH20 | 10.29 | HC |
| SRR4457240 | flag_leaf | DAH28 | 8.38 | HC |
| SRR4457241 | flag_leaf | DAH28 | 7.17 | HC |
| SRR4457242 | flag_leaf | DAH28 | 5.33 | HC |
| SRR4457244 | flag_leaf | DAH36 | 5.13 | HC |
| SRR4457246 | flag_leaf | DAH44 | 7.10 | HC |
| SRR4457247 | flag_leaf | DAH44 | 6.30 | HC |
| SRR1213690 | flower | wt(flower buds) | 6.42 | HC |
| SRR1213691 | flower | wt | 5.79 | HC |
| SRR8240825 | leaf | wild_type | 2.73 | HC |
| SRR8240826 | leaf | wild_type | 5.58 | HC |
| SRR8240818 | leaf | wild_type | 3.29 | HC |
| SRR8240820 | leaf | wild_type | 4.99 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 6.39 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 6.76 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 6.99 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 6.93 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 5.25 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 5.01 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 5.57 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 8.06 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 6.56 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 5.06 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 6.52 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 5.67 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 5.64 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 5.64 | HC |
| SRR1761529 | leaf | drought | 5.64 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 3.74 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 4.32 | HC |
| SRR6417968 | leaf | H2O_control | 4.54 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 4.20 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 6.68 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 6.99 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 4.62 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 6.33 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 6.66 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 6.56 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 7.49 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 5.59 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 7.57 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 5.63 | HC |
| SRR6502088 | leaf | control | 8.44 | HC |
| SRR6502089 | leaf | control | 7.92 | HC |
| SRR6502102 | leaf | control | 7.95 | HC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 10.48 | HC |
| SRR6053397 | leaf | gibberellic acid (GA) | 29.60 | HC |
| SRR6168974 | leaf | none (control) | 5.02 | HC |
| SRR6168979 | leaf | none (control) | 10.77 | HC |
| SRR6168980 | leaf | none (control) | 5.29 | HC |
| SRR6168981 | leaf | none (control) | 7.80 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 5.24 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 6.08 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 4.55 | HC |
| SRR8582888 | panicle | AM | 3.74 | HC |
| SRR8582889 | panicle | AM | 2.05 | HC |
| SRR8582890 | panicle | AM | 2.59 | HC |
| SRR5110430 | panicle | Dawn | 9.58 | HC |
| SRR5110431 | panicle | Dawn | 4.70 | HC |
| SRR5110432 | panicle | Dawn | 4.24 | HC |
| SRR5110438 | panicle | Dawn + 7h | 7.60 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 3.47 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 15.66 | HC |
| SRR5110458 | panicle | Dawn + 21h | 4.21 | HC |
| SRR5110459 | panicle | Dawn + 21h | 4.66 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 2.53 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 2.50 | HC |
| SRR1633182 | panicle | WT | 17.40 | HC |
| SRR1633185 | panicle | WT | 34.35 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 5.26 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 6.08 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 8.15 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 9.57 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 3.73 | HC |
| SRR4947480 | root | control | 5.65 | HC |
| SRR6502106 | root | control | 7.72 | HC |
| SRR6502108 | root | control | 5.43 | HC |
| SRR1740435 | root_differentiation_zone | wt | 4.87 | HC |
| SRR1740436 | root_differentiation_zone | wt | 5.40 | HC |
| SRR1740431 | root_elongation_zone | wt | 9.81 | HC |
| SRR1740433 | root_elongation_zone | wt | 4.01 | HC |
| SRR1740428 | root_meristematic_zone | wt | 8.77 | HC |
| SRR1740429 | root_meristematic_zone | wt | 5.41 | HC |
| SRR6441555 | seedling | wild_type | 4.24 | HC |
| SRR2154086 | seedling | wt | 4.80 | HC |
| SRR2154082 | seedling | wt | 7.36 | HC |
| SRR3098741 | seedling | wt | 4.04 | HC |
| SRR3098742 | seedling | wt | 6.22 | HC |
| SRR3098743 | seedling | wt | 5.49 | HC |
| SRR2857720 | seedling | drought_stress_1h | 4.07 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 7.44 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 16.77 | HC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 9.56 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 3.44 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 6.41 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 3.44 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 9.54 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 6.33 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 6.72 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 7.83 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 3.80 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 4.32 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 9.37 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 10.00 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 5.74 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 4.75 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 4.37 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 10.34 | HC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 25.53 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 11.84 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 28.15 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 14.21 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 25.89 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 30.93 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 33.05 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 34.78 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 13.98 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 23.53 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 13.51 | HC |
| SRR1617559 | shoot_apical_meristem | no collect | 22.01 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 12.38 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 9.74 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 10.81 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 12.57 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 9.90 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 26.60 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 13.78 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 18.35 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 5.96 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 10.15 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 3.99 | HC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 4.57 | HC |