| SRR4457249 | 2nd_leaf | DAH4 | 16.61 | HC |
| SRR4457250 | 2nd_leaf | DAH4 | 10.38 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 11.34 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 10.41 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 10.04 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 8.43 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 11.77 | HC |
| SRR4457256 | 2nd_leaf | DAH20 | 10.72 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 9.57 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 7.80 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 6.90 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 7.07 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 8.61 | HC |
| SRR4457264 | 2nd_leaf | DAH44 | 6.74 | HC |
| SRR4457266 | 2nd_leaf | DAH44 | 9.88 | HC |
| SRR358795 | callus | wt | 11.99 | HC |
| SRR358797 | callus | wt | 10.64 | HC |
| SRR358798 | callus | wt | 11.47 | HC |
| SRR6320473 | carpel | wt | 10.01 | HC |
| SRR6320498 | carpel | wt | 11.91 | HC |
| SRR5560728 | caryopsis | wild_type | 7.05 | HC |
| SRR5560729 | caryopsis | wild_type | 9.26 | HC |
| SRR4947495 | root | control | 5.74 | HC |
| SRR7265403 | coleoptile | 2dN | 5.41 | HC |
| SRR7265404 | coleoptile | 2dN | 5.41 | HC |
| SRR7265405 | coleoptile | 2dN | 4.58 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 5.20 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 5.34 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 5.23 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 5.15 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 4.04 | HC |
| SRR7265373 | embryo | dry seed 0 h | 5.64 | HC |
| SRR7265374 | embryo | dry seed 0 h | 7.30 | HC |
| SRR7265376 | embryo | 1hA | 4.72 | HC |
| SRR7265377 | embryo | 1hA | 5.20 | HC |
| SRR7265378 | embryo | 1hA | 5.45 | HC |
| SRR7265379 | embryo | 1hN | 6.30 | HC |
| SRR7265380 | embryo | 1hN | 5.02 | HC |
| SRR7265381 | embryo | 1hN | 5.78 | HC |
| SRR7265385 | embryo | 3hN | 5.84 | HC |
| SRR7265386 | embryo | 3hN | 4.84 | HC |
| SRR7265387 | embryo | 3hN | 5.09 | HC |
| SRR7265388 | embryo | 12hA | 7.11 | HC |
| SRR7265389 | embryo | 12hA | 6.46 | HC |
| SRR7265390 | embryo | 12hA | 5.82 | HC |
| SRR7265391 | embryo | 12hN | 6.10 | HC |
| SRR7265392 | embryo | 12hN | 6.13 | HC |
| SRR7265393 | embryo | 12hN | 5.93 | HC |
| SRR7265395 | embryo | 24hA | 5.69 | HC |
| SRR7265396 | embryo | 24hA | 5.45 | HC |
| SRR7265397 | embryo | 24hN | 9.07 | HC |
| SRR7265398 | embryo | 24hN | 6.73 | HC |
| SRR7265399 | embryo | 24hN | 6.78 | HC |
| SRR2338867 | endosprem | control | 2.72 | HC |
| SRR2338869 | endosprem | high_temperature | 3.68 | HC |
| SRR4457231 | flag_leaf | DAH4 | 5.46 | HC |
| SRR4457232 | flag_leaf | DAH4 | 9.27 | HC |
| SRR4457233 | flag_leaf | DAH4 | 9.52 | HC |
| SRR4457234 | flag_leaf | DAH12 | 7.25 | HC |
| SRR4457235 | flag_leaf | DAH12 | 5.68 | HC |
| SRR4457236 | flag_leaf | DAH12 | 6.05 | HC |
| SRR4457237 | flag_leaf | DAH20 | 5.16 | HC |
| SRR4457238 | flag_leaf | DAH20 | 5.33 | HC |
| SRR4457239 | flag_leaf | DAH20 | 5.87 | HC |
| SRR4457241 | flag_leaf | DAH28 | 4.15 | HC |
| SRR4457242 | flag_leaf | DAH28 | 5.67 | HC |
| SRR4457243 | flag_leaf | DAH36 | 8.95 | HC |
| SRR4457244 | flag_leaf | DAH36 | 8.03 | HC |
| SRR4457245 | flag_leaf | DAH36 | 7.77 | HC |
| SRR4457246 | flag_leaf | DAH44 | 8.29 | HC |
| SRR4457247 | flag_leaf | DAH44 | 5.65 | HC |
| SRR4457248 | flag_leaf | DAH44 | 9.61 | HC |
| SRR1213690 | flower | wt(flower buds) | 4.80 | HC |
| SRR1213691 | flower | wt | 6.00 | HC |
| SRR8240818 | leaf | wild_type | 2.83 | HC |
| SRR8240819 | leaf | wild_type | 2.72 | HC |
| SRR8240820 | leaf | wild_type | 4.16 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 7.28 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 8.14 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 7.80 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 6.61 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 6.48 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 9.56 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 7.75 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 9.91 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 7.45 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 6.82 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 7.13 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 7.89 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 6.48 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 6.93 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 7.12 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 7.05 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 7.68 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 6.02 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 8.02 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 7.44 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 10.10 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.72 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 8.88 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 7.61 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 8.10 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 6.40 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 7.77 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 6.43 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 7.28 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 5.98 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 9.40 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 11.75 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 10.53 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 10.03 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 9.40 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 11.75 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 10.53 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 10.03 | HC |
| SRR1761528 | leaf | drought | 9.40 | HC |
| SRR1761529 | leaf | drought | 11.75 | HC |
| SRR1761530 | leaf | control | 10.52 | HC |
| SRR1761531 | leaf | control | 10.03 | HC |
| SRR504365 | leaf | wt | 21.50 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 5.63 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 4.21 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 5.26 | HC |
| SRR6417967 | leaf | H2O_control | 4.44 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 3.57 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 7.49 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 7.13 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 5.12 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 5.60 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 6.96 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 6.49 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 4.92 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 8.29 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 5.38 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 7.83 | HC |
| SRR8611900 | leaf | Non-inoculated | 6.73 | HC |
| SRR8611901 | leaf | Non-inoculated | 6.52 | HC |
| SRR8611902 | leaf | Non-inoculated | 6.11 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 15.77 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 16.43 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 16.83 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 6.07 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 6.55 | HC |
| SRR1213692 | leaf | wt | 5.17 | HC |
| SRR1213693 | leaf | wt | 4.30 | HC |
| SRR5856927 | leaf | control | 5.51 | HC |
| SRR5856928 | leaf | control | 4.42 | HC |
| SRR5856929 | leaf | control | 5.27 | HC |
| SRR5856930 | leaf | salt | 1.90 | HC |
| SRR5856931 | leaf | salt | 2.19 | HC |
| SRR5856932 | leaf | salt | 2.21 | HC |
| SRR5856933 | leaf | control | 3.90 | HC |
| SRR5856934 | leaf | control | 4.33 | HC |
| SRR5856935 | leaf | control | 4.09 | HC |
| SRR5856936 | leaf | salt | 1.80 | HC |
| SRR5856938 | leaf | salt | 2.15 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 7.37 | HC |
| SRR6168979 | leaf | none (control) | 3.93 | HC |
| SRR6168980 | leaf | none (control) | 1.99 | HC |
| SRR6168981 | leaf | none (control) | 8.43 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 5.77 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 11.91 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 11.40 | HC |
| SRR8582888 | panicle | AM | 4.17 | HC |
| SRR8582889 | panicle | AM | 2.07 | HC |
| SRR8582890 | panicle | AM | 4.79 | HC |
| SRR8582891 | panicle | PM | 19.16 | HC |
| SRR8582892 | panicle | PM | 17.62 | HC |
| SRR8582893 | panicle | PM | 16.81 | HC |
| SRR5110429 | panicle | Dawn | 5.48 | HC |
| SRR5110432 | panicle | Dawn | 4.96 | HC |
| SRR4947496 | root | control | 12.03 | HC |
| SRR5110438 | panicle | Dawn + 7h | 4.49 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 6.77 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 6.46 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 5.85 | HC |
| SRR5110446 | panicle | Dusk | 6.67 | HC |
| SRR5110447 | panicle | Dusk | 5.23 | HC |
| SRR5110448 | panicle | Dusk | 6.98 | HC |
| SRR5110450 | panicle | Dawn + 14h | 5.10 | HC |
| SRR5110451 | panicle | Dawn + 14h | 4.37 | HC |
| SRR5110452 | panicle | Dawn + 14h | 7.40 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 5.82 | HC |
| SRR5110454 | panicle | Dawn + 17.5h | 4.05 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 6.71 | HC |
| SRR5110457 | panicle | Dawn + 21h | 5.27 | HC |
| SRR5110459 | panicle | Dawn + 21h | 4.89 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 4.34 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 5.81 | HC |
| SRR1633182 | panicle | WT | 13.44 | HC |
| SRR1633185 | panicle | WT | 14.99 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 6.11 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 6.24 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 17.87 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 16.78 | HC |
| SRR5126147 | root | "mock,1_day" | 6.14 | HC |
| SRR5126148 | root | "mock,1_day" | 4.88 | HC |
| SRR5126149 | root | "mock,1_day" | 9.10 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 9.27 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 8.67 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 5.59 | HC |
| SRR5126153 | root | "mock,7_days" | 6.65 | HC |
| SRR5126155 | root | "mock,7_days" | 9.83 | HC |
| SRR5126157 | root | "mock,7_days" | 17.99 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 11.71 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 12.28 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 12.10 | HC |
| SRR5126165 | root | "mock,14_days" | 7.24 | HC |
| SRR5126167 | root | "mock,14_days" | 9.63 | HC |
| SRR5126169 | root | "mock,14_days" | 10.23 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 10.56 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 10.77 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 11.80 | HC |
| SRR1213694 | root | wt | 4.24 | HC |
| SRR1213695 | root | wt | 6.30 | HC |
| SRR4947478 | root | control | 7.50 | HC |
| SRR4947479 | root | control | 7.09 | HC |
| SRR4947480 | root | control | 12.55 | HC |
| SRR4947481 | root | control | 11.92 | HC |
| SRR4947482 | root | Al | 9.01 | HC |
| SRR4947483 | root | Al | 6.88 | HC |
| SRR4947484 | root | Al | 7.94 | HC |
| SRR4947485 | root | Al | 9.60 | HC |
| SRR4947487 | root | control | 7.64 | HC |
| SRR4947488 | root | control | 10.20 | HC |
| SRR4947489 | root | control | 12.11 | HC |
| SRR4947490 | root | Al | 7.03 | HC |
| SRR4947492 | root | Al | 9.54 | HC |
| SRR4947493 | root | Al | 11.84 | HC |
| SRR4947494 | root | control | 5.04 | HC |
| SRR4947497 | root | control | 6.93 | HC |
| SRR4947498 | root | Al | 6.10 | HC |
| SRR4947499 | root | Al | 6.99 | HC |
| SRR4947500 | root | Al | 9.45 | HC |
| SRR4947501 | root | Al | 8.26 | HC |
| SRR4947502 | root | control | 6.28 | HC |
| SRR4947503 | root | control | 7.87 | HC |
| SRR4947504 | root | control | 12.40 | HC |
| SRR4947505 | root | control | 12.32 | HC |
| SRR4947506 | root | Al | 9.32 | HC |
| SRR4947508 | root | Al | 10.65 | HC |
| SRR4947509 | root | Al | 11.37 | HC |
| SRR6502091 | root | 100 mM NaCl | 10.72 | HC |
| SRR6502092 | root | 100 mM NaCl | 8.37 | HC |
| SRR6502093 | root | 100 mM NaCl | 11.58 | HC |
| SRR6502094 | root | control | 5.34 | HC |
| SRR6502095 | root | control | 5.47 | HC |
| SRR6502096 | root | control | 5.00 | HC |
| SRR6502104 | root | 100 mM NaCl | 5.84 | HC |
| SRR6502105 | root | 100 mM NaCl | 5.54 | HC |
| SRR6502106 | root | control | 4.93 | HC |
| SRR6502107 | root | control | 5.10 | HC |
| SRR6502108 | root | control | 5.16 | HC |
| SRR1740432 | root_elongation_zone | wt | 3.95 | HC |
| SRR1740429 | root_meristematic_zone | wt | 3.62 | HC |
| SRR1740430 | root_meristematic_zone | wt | 4.52 | HC |
| SRR6441554 | seedling | wild_type | 3.95 | HC |
| SRR6441555 | seedling | wild_type | 5.17 | HC |
| SRR2154086 | seedling | wt | 6.08 | HC |
| SRR2154084 | seedling | wt | 5.94 | HC |
| SRR2154087 | seedling | wt | 6.98 | HC |
| SRR3098741 | seedling | wt | 7.39 | HC |
| SRR3098742 | seedling | wt | 6.05 | HC |
| SRR3098743 | seedling | wt | 9.14 | HC |
| SRR2857719 | seedling | drought_stress_0h | 10.59 | HC |
| SRR2857720 | seedling | drought_stress_1h | 8.74 | HC |
| SRR2857721 | seedling | drought_stress_6h | 9.82 | HC |
| SRR1944583 | seedling | no_treatment | 4.61 | HC |
| SRR358791 | seedling | wt | 8.61 | HC |
| SRR358792 | seedling | wt | 9.18 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 4.04 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 5.85 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 5.93 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 8.73 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 7.72 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 9.06 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 4.74 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 4.92 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 6.31 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 6.01 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 4.54 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 4.47 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 5.08 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 5.78 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 8.88 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 7.54 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 5.46 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 4.76 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 6.22 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 5.97 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 5.43 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 4.50 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 3.76 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 4.45 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 7.55 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 6.67 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 3.99 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 4.99 | HC |