| SRR4457249 | 2nd_leaf | DAH4 | 5.70 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 5.26 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 4.33 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 3.85 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 4.47 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 5.76 | HC |
| SRR5560727 | caryopsis | wild_type | 16.31 | HC |
| SRR5560728 | caryopsis | wild_type | 30.63 | HC |
| SRR5560729 | caryopsis | wild_type | 29.22 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 5.76 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 5.56 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 6.59 | HC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 4.19 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 6.01 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 4.96 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 5.88 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 5.61 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 3.97 | HC |
| SRR2338866 | endosprem | control | 5.22 | HC |
| SRR2338867 | endosprem | control | 2.40 | HC |
| SRR2338868 | endosprem | high_temperature | 3.12 | HC |
| SRR2338869 | endosprem | high_temperature | 4.46 | HC |
| SRR4457231 | flag_leaf | DAH4 | 5.35 | HC |
| SRR4457232 | flag_leaf | DAH4 | 4.85 | HC |
| SRR4457233 | flag_leaf | DAH4 | 3.99 | HC |
| SRR4457234 | flag_leaf | DAH12 | 3.36 | HC |
| SRR4457235 | flag_leaf | DAH12 | 9.67 | HC |
| SRR4457236 | flag_leaf | DAH12 | 8.35 | HC |
| SRR4457237 | flag_leaf | DAH20 | 9.38 | HC |
| SRR4457238 | flag_leaf | DAH20 | 9.54 | HC |
| SRR4457239 | flag_leaf | DAH20 | 10.61 | HC |
| SRR4457240 | flag_leaf | DAH28 | 8.50 | HC |
| SRR4457241 | flag_leaf | DAH28 | 8.06 | HC |
| SRR4457244 | flag_leaf | DAH36 | 4.26 | HC |
| SRR4457245 | flag_leaf | DAH36 | 4.05 | HC |
| SRR1213690 | flower | wt(flower buds) | 4.17 | HC |
| SRR1213691 | flower | wt | 5.51 | HC |
| SRR8240824 | leaf | wild_type | 2.95 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 5.06 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 6.28 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 4.99 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 5.17 | HC |
| SRR504365 | leaf | wt | 6.16 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 7.54 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 6.71 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 8.67 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 9.24 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 9.36 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 10.09 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 9.01 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 8.08 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 7.11 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 9.93 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 9.04 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 11.02 | HC |
| SRR8611900 | leaf | Non-inoculated | 7.07 | HC |
| SRR8611901 | leaf | Non-inoculated | 7.54 | HC |
| SRR8611902 | leaf | Non-inoculated | 7.60 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 13.33 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 13.37 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 12.99 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 4.95 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 4.99 | HC |
| SRR1213693 | leaf | wt | 4.81 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 6.56 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 5.71 | HC |
| SRR6502088 | leaf | control | 4.62 | HC |
| SRR6502089 | leaf | control | 4.42 | HC |
| SRR6502090 | leaf | control | 5.31 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 5.68 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 5.29 | HC |
| SRR6502100 | leaf | control | 4.64 | HC |
| SRR6502101 | leaf | control | 4.39 | HC |
| SRR6502102 | leaf | control | 4.51 | HC |
| SRR5856927 | leaf | control | 13.89 | HC |
| SRR5856928 | leaf | control | 13.42 | HC |
| SRR5856929 | leaf | control | 15.14 | HC |
| SRR5856930 | leaf | salt | 10.14 | HC |
| SRR5856931 | leaf | salt | 11.09 | HC |
| SRR5856932 | leaf | salt | 9.15 | HC |
| SRR5856933 | leaf | control | 11.65 | HC |
| SRR5856934 | leaf | control | 11.52 | HC |
| SRR5856935 | leaf | control | 10.67 | HC |
| SRR5856936 | leaf | salt | 8.77 | HC |
| SRR5856937 | leaf | salt | 10.06 | HC |
| SRR5856938 | leaf | salt | 7.46 | HC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 8.50 | HC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 9.52 | HC |
| SRR6053395 | leaf | gibberellic acid (GA) | 12.44 | HC |
| SRR6053396 | leaf | gibberellic acid (GA) | 7.90 | HC |
| SRR6053397 | leaf | gibberellic acid (GA) | 8.72 | HC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 12.08 | HC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 9.15 | HC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 8.93 | HC |
| SRR6168973 | leaf | none (control) | 7.68 | HC |
| SRR6168974 | leaf | none (control) | 7.06 | HC |
| SRR6168975 | leaf | none (control) | 10.04 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 15.05 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 4.36 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 13.44 | HC |
| SRR6168979 | leaf | none (control) | 2.59 | HC |
| SRR6168980 | leaf | none (control) | 2.07 | HC |
| SRR6168981 | leaf | none (control) | 4.09 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 3.89 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 5.55 | HC |
| SRR8582889 | panicle | AM | 2.54 | HC |
| SRR8582890 | panicle | AM | 3.24 | HC |
| SRR8582893 | panicle | PM | 6.68 | HC |
| SRR5110432 | panicle | Dawn | 7.71 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 3.24 | HC |
| SRR5110438 | panicle | Dawn + 7h | 4.65 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 6.08 | HC |
| SRR5110446 | panicle | Dusk | 8.76 | HC |
| SRR5110447 | panicle | Dusk | 7.38 | HC |
| SRR5110448 | panicle | Dusk | 6.70 | HC |
| SRR5110449 | panicle | Dawn + 14h | 6.69 | HC |
| SRR5110451 | panicle | Dawn + 14h | 6.17 | HC |
| SRR5110452 | panicle | Dawn + 14h | 8.56 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 5.90 | HC |
| SRR5110454 | panicle | Dawn + 17.5h | 4.00 | HC |
| SRR5110455 | panicle | Dawn + 17.5h | 5.86 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 8.76 | HC |
| SRR5110457 | panicle | Dawn + 21h | 3.81 | HC |
| SRR5110459 | panicle | Dawn + 21h | 5.37 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 3.14 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 4.29 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 3.90 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 3.33 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 7.82 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 8.89 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 8.47 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 14.75 | HC |
| SRR1213694 | root | wt | 6.16 | HC |
| SRR1213695 | root | wt | 3.87 | HC |
| SRR6502091 | root | 100 mM NaCl | 5.76 | HC |
| SRR6502092 | root | 100 mM NaCl | 8.66 | HC |
| SRR6502094 | root | control | 5.79 | HC |
| SRR6502095 | root | control | 5.15 | HC |
| SRR6502096 | root | control | 4.83 | HC |
| SRR6502103 | root | 100 mM NaCl | 5.98 | HC |
| SRR6502105 | root | 100 mM NaCl | 7.32 | HC |
| SRR6502106 | root | control | 5.37 | HC |
| SRR6502107 | root | control | 4.43 | HC |
| SRR1740434 | root_differentiation_zone | wt | 3.94 | HC |
| SRR6441554 | seedling | wild_type | 7.49 | HC |
| SRR6441555 | seedling | wild_type | 6.94 | HC |
| SRR2154086 | seedling | wt | 6.64 | HC |
| SRR2154082 | seedling | wt | 4.11 | HC |
| SRR2154083 | seedling | wt | 5.35 | HC |
| SRR2154084 | seedling | wt | 6.02 | HC |
| SRR2154085 | seedling | wt | 6.45 | HC |
| SRR2154087 | seedling | wt | 5.84 | HC |
| SRR3098741 | seedling | wt | 6.96 | HC |
| SRR3098742 | seedling | wt | 6.42 | HC |
| SRR3098743 | seedling | wt | 6.85 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 7.40 | HC |
| SRR1944583 | seedling | no_treatment | 6.20 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 4.39 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 8.38 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 8.91 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 8.91 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 10.43 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 10.56 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 11.70 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 11.10 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 14.44 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 14.79 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 9.89 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 13.33 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 13.76 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 4.69 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 4.67 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 5.71 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 5.53 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 4.67 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 5.15 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 5.60 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 6.09 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 7.94 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 8.29 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 5.74 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 5.10 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 3.28 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 3.83 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 3.03 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 4.36 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 7.08 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 7.84 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 4.57 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 5.06 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 5.95 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 5.66 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 6.09 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 4.80 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 5.77 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 5.49 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 6.35 | HC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 4.59 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 4.43 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 4.26 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 4.11 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 4.69 | HC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 4.61 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 3.50 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 4.38 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 4.59 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 4.49 | HC |