| SRR4457249 | 2nd_leaf | DAH4 | 13.47 | HC |
| SRR4457250 | 2nd_leaf | DAH4 | 15.08 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 14.31 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 14.08 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 12.06 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 10.62 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 10.73 | HC |
| SRR4457256 | 2nd_leaf | DAH20 | 9.65 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 9.80 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 10.01 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 9.93 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 6.87 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 8.94 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 12.90 | HC |
| SRR4457264 | 2nd_leaf | DAH44 | 10.09 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 5.69 | HC |
| SRR4457266 | 2nd_leaf | DAH44 | 13.15 | HC |
| SRR358795 | callus | wt | 25.44 | HC |
| SRR358796 | callus | wt | 26.33 | HC |
| SRR358797 | callus | wt | 30.49 | HC |
| SRR358798 | callus | wt | 30.20 | HC |
| SRR5560727 | caryopsis | wild_type | 15.57 | HC |
| SRR5560728 | caryopsis | wild_type | 23.84 | HC |
| SRR5560729 | caryopsis | wild_type | 25.31 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 16.77 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 18.25 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 10.86 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 14.81 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 8.99 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 11.43 | HC |
| SRR2338866 | endosprem | control | 11.48 | HC |
| SRR2338867 | endosprem | control | 6.46 | HC |
| SRR2338868 | endosprem | high_temperature | 6.85 | HC |
| SRR2338869 | endosprem | high_temperature | 12.74 | HC |
| SRR976168 | flag_leaf | wild_type | 3.44 | HC |
| SRR4457231 | flag_leaf | DAH4 | 8.47 | HC |
| SRR4457232 | flag_leaf | DAH4 | 12.95 | HC |
| SRR4457233 | flag_leaf | DAH4 | 14.90 | HC |
| SRR4457234 | flag_leaf | DAH12 | 8.88 | HC |
| SRR4457235 | flag_leaf | DAH12 | 7.93 | HC |
| SRR4457236 | flag_leaf | DAH12 | 7.96 | HC |
| SRR4457237 | flag_leaf | DAH20 | 5.81 | HC |
| SRR4457238 | flag_leaf | DAH20 | 6.47 | HC |
| SRR4457239 | flag_leaf | DAH20 | 7.12 | HC |
| SRR4457240 | flag_leaf | DAH28 | 7.48 | HC |
| SRR4457241 | flag_leaf | DAH28 | 7.25 | HC |
| SRR4457242 | flag_leaf | DAH28 | 6.42 | HC |
| SRR4457243 | flag_leaf | DAH36 | 9.69 | HC |
| SRR4457244 | flag_leaf | DAH36 | 8.91 | HC |
| SRR4457245 | flag_leaf | DAH36 | 10.09 | HC |
| SRR4457246 | flag_leaf | DAH44 | 9.05 | HC |
| SRR4457247 | flag_leaf | DAH44 | 7.68 | HC |
| SRR4457248 | flag_leaf | DAH44 | 11.59 | HC |
| SRR1213690 | flower | wt(flower buds) | 16.11 | HC |
| SRR1213691 | flower | wt | 10.24 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 13.53 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 16.74 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 13.16 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 12.58 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 20.81 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 19.94 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 21.67 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 26.79 | HC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 17.96 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 19.29 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 20.95 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 19.26 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 23.84 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 22.45 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 14.41 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 23.53 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 23.52 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 17.85 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 23.34 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 15.34 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 18.23 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 16.89 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 19.57 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 17.01 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 17.73 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 20.37 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 19.97 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 20.64 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 24.55 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 19.55 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 15.95 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 26.11 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 18.67 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 20.45 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 19.55 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 19.62 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 17.05 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 19.15 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 11.99 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 17.63 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 11.17 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 10.50 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 14.99 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 13.43 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 11.17 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 10.50 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 14.99 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 13.43 | HC |
| SRR1761528 | leaf | drought | 11.16 | HC |
| SRR1761529 | leaf | drought | 10.50 | HC |
| SRR1761530 | leaf | control | 14.99 | HC |
| SRR1761531 | leaf | control | 13.43 | HC |
| SRR504365 | leaf | wt | 24.80 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 8.58 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 8.02 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 7.82 | HC |
| SRR6417967 | leaf | H2O_control | 6.60 | HC |
| SRR6417968 | leaf | H2O_control | 7.62 | HC |
| SRR6417969 | leaf | H2O_control | 5.82 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 5.90 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 3.97 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 12.86 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 10.98 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 5.40 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 6.10 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 9.01 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 7.88 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 6.91 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 10.90 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 5.86 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 11.96 | HC |
| SRR8611900 | leaf | Non-inoculated | 9.07 | HC |
| SRR8611901 | leaf | Non-inoculated | 9.09 | HC |
| SRR8611902 | leaf | Non-inoculated | 9.63 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 10.48 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 12.09 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 10.96 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 17.23 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 16.23 | HC |
| SRR1213692 | leaf | wt | 10.05 | HC |
| SRR1213693 | leaf | wt | 15.89 | HC |
| SRR5856929 | leaf | control | 2.70 | HC |
| SRR6168973 | leaf | none (control) | 7.37 | HC |
| SRR6168974 | leaf | none (control) | 6.38 | HC |
| SRR6168975 | leaf | none (control) | 6.11 | HC |
| SRR6168979 | leaf | none (control) | 2.38 | HC |
| SRR6168981 | leaf | none (control) | 4.00 | HC |
| SRR8582888 | panicle | AM | 14.27 | HC |
| SRR8582889 | panicle | AM | 7.18 | HC |
| SRR8582890 | panicle | AM | 11.22 | HC |
| SRR8582891 | panicle | PM | 30.76 | HC |
| SRR8582892 | panicle | PM | 42.54 | HC |
| SRR8582893 | panicle | PM | 31.82 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 8.15 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 4.93 | HC |
| SRR1633182 | panicle | WT | 10.38 | HC |
| SRR1633185 | panicle | WT | 16.86 | HC |
| SRR5126147 | root | "mock,1_day" | 16.53 | HC |
| SRR5126148 | root | "mock,1_day" | 12.75 | HC |
| SRR5126149 | root | "mock,1_day" | 21.53 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 19.75 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 22.04 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 14.52 | HC |
| SRR5126153 | root | "mock,7_days" | 15.72 | HC |
| SRR5126155 | root | "mock,7_days" | 17.29 | HC |
| SRR5126157 | root | "mock,7_days" | 33.41 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 20.35 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 21.50 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 21.38 | HC |
| SRR5126165 | root | "mock,14_days" | 14.96 | HC |
| SRR5126167 | root | "mock,14_days" | 18.27 | HC |
| SRR5126169 | root | "mock,14_days" | 21.49 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 16.06 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 21.11 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 16.29 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 3.44 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 7.17 | HC |
| SRR1213694 | root | wt | 20.80 | HC |
| SRR1213695 | root | wt | 20.21 | HC |
| SRR6502103 | root | 100 mM NaCl | 6.02 | HC |
| SRR6502104 | root | 100 mM NaCl | 9.40 | HC |
| SRR6502106 | root | control | 10.32 | HC |
| SRR1740435 | root_differentiation_zone | wt | 4.61 | HC |
| SRR1740436 | root_differentiation_zone | wt | 4.07 | HC |
| SRR1740429 | root_meristematic_zone | wt | 4.44 | HC |
| SRR1740430 | root_meristematic_zone | wt | 3.61 | HC |
| SRR6441554 | seedling | wild_type | 8.85 | HC |
| SRR6441555 | seedling | wild_type | 8.87 | HC |
| SRR2154086 | seedling | wt | 17.48 | HC |
| SRR2154085 | seedling | wt | 16.49 | HC |
| SRR3098741 | seedling | wt | 13.32 | HC |
| SRR3098742 | seedling | wt | 12.57 | HC |
| SRR3098743 | seedling | wt | 9.46 | HC |
| SRR2857719 | seedling | drought_stress_0h | 18.47 | HC |
| SRR2857720 | seedling | drought_stress_1h | 15.60 | HC |
| SRR2857721 | seedling | drought_stress_6h | 9.78 | HC |
| SRR1944583 | seedling | no_treatment | 7.26 | HC |
| SRR358791 | seedling | wt | 14.53 | HC |
| SRR358792 | seedling | wt | 14.42 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 4.19 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 4.68 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 8.20 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.05 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 6.47 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 10.57 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 10.87 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 12.62 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 12.51 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 9.95 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 11.05 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 11.70 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 13.12 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 20.45 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 18.40 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 11.34 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 11.07 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 8.93 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 11.19 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 7.68 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 7.12 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 8.52 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 10.03 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 18.22 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 15.59 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 8.88 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 8.09 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 9.03 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 12.58 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 8.29 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 7.50 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 34.88 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 31.94 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 32.13 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 31.82 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 33.08 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 29.28 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 35.76 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 38.13 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 29.64 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 37.30 | HC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 37.70 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 12.11 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 13.15 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 11.10 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 17.99 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 13.34 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 14.23 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 14.82 | HC |
| SRR1617559 | shoot_apical_meristem | no collect | 14.95 | HC |