| SRR4457251 | 2nd_leaf | DAH4 | 3.79 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 5.40 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 4.83 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 6.89 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 5.43 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 5.44 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 4.84 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 6.76 | HC |
| SRR4457263 | 2nd_leaf | DAH36 | 8.26 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 5.32 | HC |
| SRR5560727 | caryopsis | wild_type | 9.53 | HC |
| SRR5560728 | caryopsis | wild_type | 11.10 | HC |
| SRR5560729 | caryopsis | wild_type | 17.94 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 11.61 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 10.22 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 9.36 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 10.16 | HC |
| SRR7265405 | coleoptile | 2dN | 3.76 | HC |
| SRR7265410 | coleoptile | 3dN | 3.96 | HC |
| SRR7265411 | coleoptile | 3dN | 4.35 | HC |
| SRR7265417 | coleoptile | 4dN | 4.55 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 10.16 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 8.86 | HC |
| SRR4457231 | flag_leaf | DAH4 | 5.82 | HC |
| SRR4457232 | flag_leaf | DAH4 | 5.97 | HC |
| SRR4457233 | flag_leaf | DAH4 | 5.58 | HC |
| SRR4457234 | flag_leaf | DAH12 | 5.61 | HC |
| SRR4457236 | flag_leaf | DAH12 | 5.90 | HC |
| SRR4457237 | flag_leaf | DAH20 | 3.44 | HC |
| SRR4457242 | flag_leaf | DAH28 | 3.77 | HC |
| SRR4457243 | flag_leaf | DAH36 | 6.17 | HC |
| SRR4457244 | flag_leaf | DAH36 | 6.25 | HC |
| SRR4457245 | flag_leaf | DAH36 | 8.60 | HC |
| SRR1213690 | flower | wt(flower buds) | 11.20 | HC |
| SRR1213691 | flower | wt | 10.07 | HC |
| SRR8240824 | leaf | wild_type | 20.90 | HC |
| SRR8240825 | leaf | wild_type | 20.88 | HC |
| SRR8240826 | leaf | wild_type | 20.38 | HC |
| SRR8240818 | leaf | wild_type | 12.22 | HC |
| SRR8240819 | leaf | wild_type | 13.85 | HC |
| SRR8240820 | leaf | wild_type | 13.02 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 13.94 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 10.61 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 10.06 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 10.35 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.91 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 6.02 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 5.11 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 6.26 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 6.79 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 7.77 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 6.79 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 7.77 | HC |
| SRR1761530 | leaf | control | 6.79 | HC |
| SRR1761531 | leaf | control | 7.77 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 5.70 | HC |
| SRR6417967 | leaf | H2O_control | 9.02 | HC |
| SRR6417968 | leaf | H2O_control | 7.34 | HC |
| SRR6417969 | leaf | H2O_control | 13.61 | HC |
| SRR8611900 | leaf | Non-inoculated | 9.35 | HC |
| SRR8611901 | leaf | Non-inoculated | 9.28 | HC |
| SRR8611902 | leaf | Non-inoculated | 11.13 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 4.95 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 4.33 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 5.11 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 4.81 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 6.05 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 6.41 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 4.83 | HC |
| SRR6502088 | leaf | control | 11.53 | HC |
| SRR6502089 | leaf | control | 11.37 | HC |
| SRR6502090 | leaf | control | 10.27 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 11.77 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 9.20 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 11.11 | HC |
| SRR6502100 | leaf | control | 17.03 | HC |
| SRR6502101 | leaf | control | 15.31 | HC |
| SRR6502102 | leaf | control | 12.62 | HC |
| SRR6168973 | leaf | none (control) | 14.89 | HC |
| SRR6168974 | leaf | none (control) | 17.54 | HC |
| SRR6168975 | leaf | none (control) | 11.01 | HC |
| SRR8582888 | panicle | AM | 11.32 | HC |
| SRR8582889 | panicle | AM | 13.05 | HC |
| SRR8582890 | panicle | AM | 8.80 | HC |
| SRR8582893 | panicle | PM | 6.50 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 2.66 | HC |
| SRR1633182 | panicle | WT | 8.27 | HC |
| SRR1633185 | panicle | WT | 10.13 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 7.78 | HC |
| SRR5126147 | root | "mock,1_day" | 6.90 | HC |
| SRR5126148 | root | "mock,1_day" | 6.96 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 7.55 | HC |
| SRR5126153 | root | "mock,7_days" | 4.67 | HC |
| SRR5126155 | root | "mock,7_days" | 6.89 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 6.17 | HC |
| SRR5126165 | root | "mock,14_days" | 7.11 | HC |
| SRR5126167 | root | "mock,14_days" | 4.91 | HC |
| SRR5126169 | root | "mock,14_days" | 6.77 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 5.45 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 7.47 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 8.04 | HC |
| SRR1740434 | root_differentiation_zone | wt | 3.66 | HC |
| SRR1740431 | root_elongation_zone | wt | 4.88 | HC |
| SRR1740432 | root_elongation_zone | wt | 7.19 | HC |
| SRR1740433 | root_elongation_zone | wt | 7.92 | HC |
| SRR1740428 | root_meristematic_zone | wt | 9.27 | HC |
| SRR1740429 | root_meristematic_zone | wt | 10.96 | HC |
| SRR1740430 | root_meristematic_zone | wt | 20.03 | HC |
| SRR6441554 | seedling | wild_type | 9.48 | HC |
| SRR6441555 | seedling | wild_type | 9.54 | HC |
| SRR2154086 | seedling | wt | 8.08 | HC |
| SRR2154085 | seedling | wt | 7.29 | HC |
| SRR2154087 | seedling | wt | 6.73 | HC |
| SRR3098741 | seedling | wt | 8.40 | HC |
| SRR3098742 | seedling | wt | 11.11 | HC |
| SRR3098743 | seedling | wt | 9.95 | HC |
| SRR2857719 | seedling | drought_stress_0h | 8.67 | HC |
| SRR2857720 | seedling | drought_stress_1h | 7.65 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 7.16 | HC |
| SRR1944583 | seedling | no_treatment | 16.86 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 7.36 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 5.38 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 9.13 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 9.95 | HC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 21.06 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 15.12 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 11.32 | HC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 10.87 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.16 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 8.69 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 9.65 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 3.55 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 5.04 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 3.79 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 3.13 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 4.40 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 4.95 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 4.77 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 5.88 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 6.77 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 4.68 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 4.26 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 8.13 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 5.56 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 7.48 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 5.65 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 7.36 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 8.41 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 4.34 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 4.82 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 4.44 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 4.50 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.83 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 10.80 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 11.42 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 18.07 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 23.09 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 20.92 | HC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 21.41 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 14.88 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 18.90 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 17.80 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 18.76 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 21.45 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 20.06 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 22.34 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 19.17 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 15.98 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 16.07 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 14.42 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 18.10 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 19.07 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 16.96 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 17.25 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 14.37 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 22.37 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 14.03 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 7.49 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 8.52 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 11.00 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 8.67 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 12.25 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 10.70 | HC |
| SRR1617559 | shoot_apical_meristem | no collect | 8.80 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 3.85 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 5.09 | HC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 6.36 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 7.73 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 4.80 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 4.54 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 6.12 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 7.90 | HC |