| SRR5560727 | caryopsis | wild_type | 10.45 | HC |
| SRR5560728 | caryopsis | wild_type | 7.54 | HC |
| SRR5560729 | caryopsis | wild_type | 8.43 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 21.73 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 20.08 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 17.42 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 22.34 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 4.75 | HC |
| SRR1213691 | flower | wt | 8.66 | HC |
| SRR8240824 | leaf | wild_type | 8.81 | HC |
| SRR8240825 | leaf | wild_type | 4.25 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 33.22 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 27.45 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 22.95 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 29.57 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 6.23 | HC |
| SRR504365 | leaf | wt | 7.02 | HC |
| SRR6417969 | leaf | H2O_control | 4.59 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 4.92 | HC |
| SRR8611900 | leaf | Non-inoculated | 10.83 | HC |
| SRR8611901 | leaf | Non-inoculated | 11.74 | HC |
| SRR8611902 | leaf | Non-inoculated | 9.82 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 7.50 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 8.13 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 8.38 | HC |
| SRR1213692 | leaf | wt | 6.76 | HC |
| SRR8582888 | panicle | AM | 6.43 | HC |
| SRR8582889 | panicle | AM | 7.54 | HC |
| SRR8582890 | panicle | AM | 7.24 | HC |
| SRR8582891 | panicle | PM | 17.97 | HC |
| SRR8582892 | panicle | PM | 12.19 | HC |
| SRR8582893 | panicle | PM | 19.16 | HC |
| SRR5126147 | root | "mock,1_day" | 13.22 | HC |
| SRR5126148 | root | "mock,1_day" | 15.27 | HC |
| SRR5126149 | root | "mock,1_day" | 15.82 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 24.04 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 22.35 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 19.65 | HC |
| SRR5126153 | root | "mock,7_days" | 10.97 | HC |
| SRR5126155 | root | "mock,7_days" | 19.40 | HC |
| SRR5126157 | root | "mock,7_days" | 6.51 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 26.58 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 13.74 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 14.50 | HC |
| SRR5126165 | root | "mock,14_days" | 5.30 | HC |
| SRR5126167 | root | "mock,14_days" | 8.95 | HC |
| SRR5126169 | root | "mock,14_days" | 16.13 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 14.94 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 13.02 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 11.21 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 7.84 | HC |
| SRR6441554 | seedling | wild_type | 17.46 | HC |
| SRR6441555 | seedling | wild_type | 17.88 | HC |
| SRR2154086 | seedling | wt | 7.59 | HC |
| SRR3098741 | seedling | wt | 15.51 | HC |
| SRR3098742 | seedling | wt | 21.17 | HC |
| SRR3098743 | seedling | wt | 6.01 | HC |
| SRR2857719 | seedling | drought_stress_0h | 6.33 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 12.70 | HC |
| SRR1944583 | seedling | no_treatment | 13.92 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 7.70 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 6.59 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 9.64 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 11.51 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 14.79 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 10.19 | HC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 7.63 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.46 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 11.24 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 7.89 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 5.20 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 3.84 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 4.80 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 6.35 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 6.71 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 6.90 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 9.12 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 6.69 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 6.62 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 9.35 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 6.69 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 7.41 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 6.96 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 10.67 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 11.24 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 8.27 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 7.60 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 12.17 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 14.00 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 11.50 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 17.67 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 8.16 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 8.46 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 9.10 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 10.90 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 7.38 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 8.02 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 10.37 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 11.26 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 17.83 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 22.61 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 18.18 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 20.07 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 19.80 | HC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 20.91 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 21.96 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 17.74 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 19.62 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 11.67 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 17.54 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 27.89 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 13.02 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 9.21 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 8.01 | HC |