| SRR4457251 | 2nd_leaf | DAH4 | 3.91 | HC |
| SRR358795 | callus | wt | 18.98 | HC |
| SRR358796 | callus | wt | 16.66 | HC |
| SRR358797 | callus | wt | 11.31 | HC |
| SRR358798 | callus | wt | 16.46 | HC |
| SRR5560727 | caryopsis | wild_type | 12.05 | HC |
| SRR5560728 | caryopsis | wild_type | 9.35 | HC |
| SRR5560729 | caryopsis | wild_type | 13.05 | HC |
| SRR4947495 | root | control | 5.86 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 4.45 | HC |
| SRR7265400 | coleoptile | 2dA | 4.98 | HC |
| SRR7265401 | coleoptile | 2dA | 5.03 | HC |
| SRR7265402 | coleoptile | 2dA | 4.31 | HC |
| SRR7265406 | coleoptile | 3dA | 9.95 | HC |
| SRR7265407 | coleoptile | 3dA | 8.39 | HC |
| SRR7265408 | coleoptile | 3dA | 6.77 | HC |
| SRR7265412 | coleoptile | 4dA | 10.68 | HC |
| SRR7265413 | coleoptile | 4dA | 12.95 | HC |
| SRR7265414 | coleoptile | 4dA | 17.35 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 6.91 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 6.12 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 6.00 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 74.21 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 5.08 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 58.22 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 77.05 | HC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 5.61 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 70.46 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 79.98 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 118.37 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 6.08 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 5.42 | HC |
| SRR976168 | flag_leaf | wild_type | 13.98 | HC |
| SRR1213690 | flower | wt(flower buds) | 5.79 | HC |
| SRR1213691 | flower | wt | 6.08 | HC |
| SRR8060835 | leaf | wild_type | 4.33 | HC |
| SRR8060836 | leaf | wild_type | 4.99 | HC |
| SRR8060837 | leaf | wild_type | 4.22 | HC |
| SRR8240824 | leaf | wild_type | 8.73 | HC |
| SRR8240825 | leaf | wild_type | 5.83 | HC |
| SRR8240818 | leaf | wild_type | 5.28 | HC |
| SRR8240819 | leaf | wild_type | 6.49 | HC |
| SRR8240820 | leaf | wild_type | 4.43 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 6.19 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 6.35 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 8.61 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 9.25 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 17.42 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 7.55 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 17.42 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 7.55 | HC |
| SRR1761528 | leaf | drought | 17.42 | HC |
| SRR1761529 | leaf | drought | 7.55 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 3.89 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 8.34 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 10.92 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 7.41 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 11.02 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 3.69 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 10.04 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 5.26 | HC |
| SRR8611901 | leaf | Non-inoculated | 4.07 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 10.31 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 13.51 | HC |
| SRR1213692 | leaf | wt | 5.02 | HC |
| SRR1213693 | leaf | wt | 5.04 | HC |
| SRR5856927 | leaf | control | 25.93 | HC |
| SRR5856928 | leaf | control | 23.87 | HC |
| SRR5856929 | leaf | control | 21.34 | HC |
| SRR5856930 | leaf | salt | 35.65 | HC |
| SRR5856931 | leaf | salt | 31.34 | HC |
| SRR5856932 | leaf | salt | 33.54 | HC |
| SRR5856933 | leaf | control | 13.05 | HC |
| SRR5856934 | leaf | control | 13.86 | HC |
| SRR5856935 | leaf | control | 14.72 | HC |
| SRR5856936 | leaf | salt | 23.88 | HC |
| SRR5856937 | leaf | salt | 24.89 | HC |
| SRR5856938 | leaf | salt | 23.52 | HC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 7.15 | HC |
| SRR8582888 | panicle | AM | 3.67 | HC |
| SRR8582889 | panicle | AM | 3.84 | HC |
| SRR8582890 | panicle | AM | 4.12 | HC |
| SRR4947496 | root | control | 23.62 | HC |
| SRR5126147 | root | "mock,1_day" | 14.35 | HC |
| SRR5126148 | root | "mock,1_day" | 14.55 | HC |
| SRR5126149 | root | "mock,1_day" | 17.30 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 15.76 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 16.57 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 14.35 | HC |
| SRR5126153 | root | "mock,7_days" | 13.00 | HC |
| SRR5126155 | root | "mock,7_days" | 16.52 | HC |
| SRR5126157 | root | "mock,7_days" | 16.58 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 13.39 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 20.91 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 13.80 | HC |
| SRR5126165 | root | "mock,14_days" | 16.15 | HC |
| SRR5126167 | root | "mock,14_days" | 21.19 | HC |
| SRR5126169 | root | "mock,14_days" | 20.27 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 10.53 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 17.17 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 14.08 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 17.26 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 16.61 | HC |
| SRR1213694 | root | wt | 8.21 | HC |
| SRR1213695 | root | wt | 7.58 | HC |
| SRR4947478 | root | control | 8.09 | HC |
| SRR4947479 | root | control | 5.70 | HC |
| SRR4947480 | root | control | 18.48 | HC |
| SRR4947481 | root | control | 17.79 | HC |
| SRR4947484 | root | Al | 11.98 | HC |
| SRR4947485 | root | Al | 14.90 | HC |
| SRR4947487 | root | control | 6.05 | HC |
| SRR4947488 | root | control | 25.52 | HC |
| SRR4947489 | root | control | 17.84 | HC |
| SRR4947490 | root | Al | 4.42 | HC |
| SRR4947491 | root | Al | 5.74 | HC |
| SRR4947492 | root | Al | 17.60 | HC |
| SRR4947493 | root | Al | 18.89 | HC |
| SRR4947494 | root | control | 7.20 | HC |
| SRR4947497 | root | control | 19.65 | HC |
| SRR4947500 | root | Al | 18.83 | HC |
| SRR4947501 | root | Al | 10.67 | HC |
| SRR4947502 | root | control | 9.72 | HC |
| SRR4947503 | root | control | 5.61 | HC |
| SRR4947504 | root | control | 17.73 | HC |
| SRR4947505 | root | control | 20.23 | HC |
| SRR4947506 | root | Al | 9.12 | HC |
| SRR4947508 | root | Al | 13.34 | HC |
| SRR4947509 | root | Al | 11.17 | HC |
| SRR6502091 | root | 100 mM NaCl | 6.99 | HC |
| SRR6502092 | root | 100 mM NaCl | 7.80 | HC |
| SRR6502093 | root | 100 mM NaCl | 8.05 | HC |
| SRR6502094 | root | control | 6.40 | HC |
| SRR6502095 | root | control | 5.87 | HC |
| SRR6502096 | root | control | 6.54 | HC |
| SRR6502103 | root | 100 mM NaCl | 8.64 | HC |
| SRR6502104 | root | 100 mM NaCl | 8.59 | HC |
| SRR6502105 | root | 100 mM NaCl | 10.28 | HC |
| SRR6502106 | root | control | 4.61 | HC |
| SRR6502107 | root | control | 5.03 | HC |
| SRR6502108 | root | control | 5.96 | HC |
| SRR1740434 | root_differentiation_zone | wt | 5.04 | HC |
| SRR1740435 | root_differentiation_zone | wt | 6.17 | HC |
| SRR1740436 | root_differentiation_zone | wt | 7.67 | HC |
| SRR1740431 | root_elongation_zone | wt | 4.74 | HC |
| SRR1740432 | root_elongation_zone | wt | 4.05 | HC |
| SRR1740433 | root_elongation_zone | wt | 4.53 | HC |
| SRR6441554 | seedling | wild_type | 5.29 | HC |
| SRR6441555 | seedling | wild_type | 5.25 | HC |
| SRR2154086 | seedling | wt | 11.69 | HC |
| SRR2154082 | seedling | wt | 8.13 | HC |
| SRR2154083 | seedling | wt | 10.33 | HC |
| SRR2154084 | seedling | wt | 9.96 | HC |
| SRR2154085 | seedling | wt | 11.09 | HC |
| SRR2154087 | seedling | wt | 9.31 | HC |
| SRR2857719 | seedling | drought_stress_0h | 101.61 | HC |
| SRR2857720 | seedling | drought_stress_1h | 45.42 | HC |
| SRR2857721 | seedling | drought_stress_6h | 43.78 | HC |
| SRR1944583 | seedling | no_treatment | 5.45 | HC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 8.70 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 6.26 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 4.79 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 3.93 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 11.62 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 6.93 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 6.50 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 4.48 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 4.58 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 8.25 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 8.14 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 7.52 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 6.50 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 5.22 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 7.18 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 7.83 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 5.98 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 7.71 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 7.03 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 7.83 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 7.31 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 8.01 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 6.26 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 5.01 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 4.74 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 6.65 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 11.08 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 10.79 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 5.47 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 4.61 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 6.12 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 5.42 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 5.58 | HC |