| SRR4457250 | 2nd_leaf | DAH4 | 4.85 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 6.81 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 10.88 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 11.31 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 8.29 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 16.51 | HC |
| SRR4457256 | 2nd_leaf | DAH20 | 11.86 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 15.46 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 21.41 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 16.89 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 11.82 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 6.86 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 10.91 | HC |
| SRR4457264 | 2nd_leaf | DAH44 | 13.99 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 6.69 | HC |
| SRR4457266 | 2nd_leaf | DAH44 | 20.17 | HC |
| SRR358796 | callus | wt | 11.99 | HC |
| SRR6320473 | carpel | wt | 7.61 | HC |
| SRR5560729 | caryopsis | wild_type | 5.97 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 5.62 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 4.63 | HC |
| SRR7265400 | coleoptile | 2dA | 7.60 | HC |
| SRR7265401 | coleoptile | 2dA | 7.85 | HC |
| SRR7265402 | coleoptile | 2dA | 7.11 | HC |
| SRR7265403 | coleoptile | 2dN | 6.26 | HC |
| SRR7265404 | coleoptile | 2dN | 5.69 | HC |
| SRR7265405 | coleoptile | 2dN | 5.03 | HC |
| SRR7265406 | coleoptile | 3dA | 6.18 | HC |
| SRR7265407 | coleoptile | 3dA | 6.08 | HC |
| SRR7265408 | coleoptile | 3dA | 4.46 | HC |
| SRR7265409 | coleoptile | 3dN | 5.26 | HC |
| SRR7265410 | coleoptile | 3dN | 3.85 | HC |
| SRR7265411 | coleoptile | 3dN | 3.74 | HC |
| SRR7265412 | coleoptile | 4dA | 5.59 | HC |
| SRR7265413 | coleoptile | 4dA | 11.23 | HC |
| SRR7265414 | coleoptile | 4dA | 8.92 | HC |
| SRR7265415 | coleoptile | 4dN | 6.29 | HC |
| SRR7265416 | coleoptile | 4dN | 4.42 | HC |
| SRR7265417 | coleoptile | 4dN | 5.45 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 6.38 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 7.15 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 5.73 | HC |
| SRR7265373 | embryo | dry seed 0 h | 12.99 | HC |
| SRR7265374 | embryo | dry seed 0 h | 13.40 | HC |
| SRR7265375 | embryo | dry seed 0 h | 4.70 | HC |
| SRR7265376 | embryo | 1hA | 10.66 | HC |
| SRR7265377 | embryo | 1hA | 10.22 | HC |
| SRR7265378 | embryo | 1hA | 11.03 | HC |
| SRR7265379 | embryo | 1hN | 10.75 | HC |
| SRR7265380 | embryo | 1hN | 11.79 | HC |
| SRR7265381 | embryo | 1hN | 12.85 | HC |
| SRR7265382 | embryo | 3hA | 25.35 | HC |
| SRR7265383 | embryo | 3hA | 17.68 | HC |
| SRR7265384 | embryo | 3hA | 17.83 | HC |
| SRR7265385 | embryo | 3hN | 16.46 | HC |
| SRR7265386 | embryo | 3hN | 14.05 | HC |
| SRR7265387 | embryo | 3hN | 15.27 | HC |
| SRR7265388 | embryo | 12hA | 9.05 | HC |
| SRR7265389 | embryo | 12hA | 9.16 | HC |
| SRR7265390 | embryo | 12hA | 12.54 | HC |
| SRR7265391 | embryo | 12hN | 6.79 | HC |
| SRR7265392 | embryo | 12hN | 7.44 | HC |
| SRR7265393 | embryo | 12hN | 7.64 | HC |
| SRR7265394 | embryo | 24hA | 6.87 | HC |
| SRR7265395 | embryo | 24hA | 8.06 | HC |
| SRR7265396 | embryo | 24hA | 7.65 | HC |
| SRR7265397 | embryo | 24hN | 9.92 | HC |
| SRR7265398 | embryo | 24hN | 7.03 | HC |
| SRR7265399 | embryo | 24hN | 6.45 | HC |
| SRR4457231 | flag_leaf | DAH4 | 5.82 | HC |
| SRR4457232 | flag_leaf | DAH4 | 7.26 | HC |
| SRR4457233 | flag_leaf | DAH4 | 6.58 | HC |
| SRR4457234 | flag_leaf | DAH12 | 7.94 | HC |
| SRR4457235 | flag_leaf | DAH12 | 7.80 | HC |
| SRR4457236 | flag_leaf | DAH12 | 8.71 | HC |
| SRR4457237 | flag_leaf | DAH20 | 12.73 | HC |
| SRR4457238 | flag_leaf | DAH20 | 11.44 | HC |
| SRR4457239 | flag_leaf | DAH20 | 14.93 | HC |
| SRR4457240 | flag_leaf | DAH28 | 10.20 | HC |
| SRR4457241 | flag_leaf | DAH28 | 14.47 | HC |
| SRR4457242 | flag_leaf | DAH28 | 16.57 | HC |
| SRR4457243 | flag_leaf | DAH36 | 10.51 | HC |
| SRR4457244 | flag_leaf | DAH36 | 7.83 | HC |
| SRR4457245 | flag_leaf | DAH36 | 12.47 | HC |
| SRR4457246 | flag_leaf | DAH44 | 17.57 | HC |
| SRR4457247 | flag_leaf | DAH44 | 12.77 | HC |
| SRR4457248 | flag_leaf | DAH44 | 19.45 | HC |
| SRR1213690 | flower | wt(flower buds) | 3.91 | HC |
| SRR1213691 | flower | wt | 5.03 | HC |
| SRR8060836 | leaf | wild_type | 3.73 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 9.01 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 6.41 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 6.37 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 7.79 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 6.21 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 6.80 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 5.81 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 8.53 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 7.50 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 5.36 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 6.41 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 6.15 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 5.35 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 6.79 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 5.04 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 6.87 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 7.10 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 6.49 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 7.27 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 6.47 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 6.17 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 10.02 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 7.73 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 7.11 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 6.87 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 7.21 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 7.62 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 8.46 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 7.01 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 7.25 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 5.59 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 8.47 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 5.59 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 8.47 | HC |
| SRR1761528 | leaf | drought | 5.59 | HC |
| SRR1761530 | leaf | control | 8.47 | HC |
| SRR504365 | leaf | wt | 10.18 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 9.68 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 10.44 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 10.78 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 9.77 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 8.21 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 7.26 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 7.12 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 6.97 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 10.75 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 12.22 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 7.10 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 10.29 | HC |
| SRR8611901 | leaf | Non-inoculated | 3.66 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 4.54 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 8.05 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 7.31 | HC |
| SRR1213692 | leaf | wt | 7.17 | HC |
| SRR1213693 | leaf | wt | 4.90 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 4.78 | HC |
| SRR6502088 | leaf | control | 6.24 | HC |
| SRR6502089 | leaf | control | 4.87 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 5.84 | HC |
| SRR6502100 | leaf | control | 4.96 | HC |
| SRR6502102 | leaf | control | 4.88 | HC |
| SRR5856931 | leaf | salt | 1.92 | HC |
| SRR5856933 | leaf | control | 3.18 | HC |
| SRR5856935 | leaf | control | 3.57 | HC |
| SRR5856937 | leaf | salt | 1.85 | HC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 9.07 | HC |
| SRR5110429 | panicle | Dawn | 7.96 | HC |
| SRR5110430 | panicle | Dawn | 8.03 | HC |
| SRR5110431 | panicle | Dawn | 9.92 | HC |
| SRR5110432 | panicle | Dawn | 7.81 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 3.87 | HC |
| SRR5110437 | panicle | Dawn + 7h | 5.06 | HC |
| SRR5110439 | panicle | Dawn + 7h | 5.77 | HC |
| SRR5110441 | panicle | Dawn + 10.5h | 6.00 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 5.39 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 4.86 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 5.42 | HC |
| SRR5110445 | panicle | Dusk | 4.85 | HC |
| SRR5110446 | panicle | Dusk | 6.81 | HC |
| SRR5110447 | panicle | Dusk | 5.53 | HC |
| SRR5110448 | panicle | Dusk | 10.29 | HC |
| SRR5110450 | panicle | Dawn + 14h | 6.25 | HC |
| SRR5110451 | panicle | Dawn + 14h | 6.96 | HC |
| SRR5110452 | panicle | Dawn + 14h | 9.42 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 6.24 | HC |
| SRR5110454 | panicle | Dawn + 17.5h | 5.45 | HC |
| SRR5110455 | panicle | Dawn + 17.5h | 8.03 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 8.07 | HC |
| SRR5110457 | panicle | Dawn + 21h | 6.30 | HC |
| SRR5110458 | panicle | Dawn + 21h | 5.84 | HC |
| SRR5110459 | panicle | Dawn + 21h | 6.29 | HC |
| SRR5110460 | panicle | Dawn + 21h | 10.75 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 2.53 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 2.43 | HC |
| SRR1633182 | panicle | WT | 8.18 | HC |
| SRR1633185 | panicle | WT | 10.89 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 3.53 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 4.43 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 4.95 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 4.75 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 12.03 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 10.15 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 5.39 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 5.05 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 4.50 | HC |
| SRR5126153 | root | "mock,7_days" | 8.31 | HC |
| SRR5126155 | root | "mock,7_days" | 8.62 | HC |
| SRR5126157 | root | "mock,7_days" | 9.33 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 16.27 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 18.36 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 9.77 | HC |
| SRR5126165 | root | "mock,14_days" | 12.39 | HC |
| SRR5126167 | root | "mock,14_days" | 6.56 | HC |
| SRR5126169 | root | "mock,14_days" | 8.53 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 13.55 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 12.39 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 13.05 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 6.06 | HC |
| SRR1213694 | root | wt | 4.27 | HC |
| SRR1213695 | root | wt | 8.26 | HC |
| SRR4947482 | root | Al | 3.64 | HC |
| SRR6502091 | root | 100 mM NaCl | 5.60 | HC |
| SRR6502093 | root | 100 mM NaCl | 6.24 | HC |
| SRR6502103 | root | 100 mM NaCl | 5.75 | HC |
| SRR6502104 | root | 100 mM NaCl | 6.74 | HC |
| SRR6502105 | root | 100 mM NaCl | 4.84 | HC |
| SRR6502106 | root | control | 6.03 | HC |
| SRR6502107 | root | control | 7.11 | HC |
| SRR6502108 | root | control | 7.80 | HC |
| SRR1740434 | root_differentiation_zone | wt | 4.35 | HC |
| SRR1740435 | root_differentiation_zone | wt | 3.81 | HC |
| SRR1740436 | root_differentiation_zone | wt | 6.75 | HC |
| SRR1740432 | root_elongation_zone | wt | 6.49 | HC |
| SRR1740433 | root_elongation_zone | wt | 3.65 | HC |
| SRR1740429 | root_meristematic_zone | wt | 7.36 | HC |
| SRR1740430 | root_meristematic_zone | wt | 7.40 | HC |
| SRR6441554 | seedling | wild_type | 3.20 | HC |
| SRR6441555 | seedling | wild_type | 3.71 | HC |
| SRR3098741 | seedling | wt | 3.67 | HC |
| SRR3098742 | seedling | wt | 4.80 | HC |
| SRR3098743 | seedling | wt | 3.90 | HC |
| SRR2857719 | seedling | drought_stress_0h | 8.54 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 10.17 | HC |
| SRR358791 | seedling | wt | 12.58 | HC |
| SRR358792 | seedling | wt | 11.00 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 9.89 | HC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 7.01 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 6.91 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 5.19 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 6.28 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 6.31 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 6.03 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 4.44 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 4.18 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 5.09 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 5.03 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 4.75 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 5.58 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 6.65 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 3.94 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 4.92 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 3.84 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 4.76 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 9.82 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 5.97 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 5.31 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 3.04 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 7.03 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 8.12 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 7.76 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 9.60 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 8.87 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 9.92 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 10.89 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 9.93 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 8.69 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 9.92 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 8.87 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 7.67 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 11.81 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 11.69 | HC |
| SRR1617559 | shoot_apical_meristem | no collect | 7.58 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 3.78 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 6.83 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 6.12 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 5.95 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 4.60 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 6.53 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 7.06 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 3.90 | HC |