| SRR4457251 | 2nd_leaf | DAH4 | 6.35 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 11.92 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 14.24 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 18.10 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 28.42 | HC |
| SRR4457256 | 2nd_leaf | DAH20 | 12.03 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 22.26 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 32.98 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 16.11 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 29.02 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 14.12 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 19.31 | HC |
| SRR4457263 | 2nd_leaf | DAH36 | 10.86 | HC |
| SRR4457264 | 2nd_leaf | DAH44 | 18.09 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 25.62 | HC |
| SRR4457266 | 2nd_leaf | DAH44 | 10.84 | HC |
| SRR3745125 | anther | wt | 21.00 | HC |
| SRR3745127 | anther | wt | 18.77 | HC |
| SRR358795 | callus | wt | 160.74 | HC |
| SRR358796 | callus | wt | 147.49 | HC |
| SRR358797 | callus | wt | 166.95 | HC |
| SRR358798 | callus | wt | 152.47 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 7.24 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 4.95 | HC |
| SRR7265400 | coleoptile | 2dA | 35.17 | HC |
| SRR7265401 | coleoptile | 2dA | 27.37 | HC |
| SRR7265402 | coleoptile | 2dA | 27.33 | HC |
| SRR7265403 | coleoptile | 2dN | 16.66 | HC |
| SRR7265404 | coleoptile | 2dN | 22.17 | HC |
| SRR7265405 | coleoptile | 2dN | 16.65 | HC |
| SRR7265406 | coleoptile | 3dA | 12.69 | HC |
| SRR7265407 | coleoptile | 3dA | 16.22 | HC |
| SRR7265408 | coleoptile | 3dA | 6.30 | HC |
| SRR7265409 | coleoptile | 3dN | 84.41 | HC |
| SRR7265410 | coleoptile | 3dN | 19.40 | HC |
| SRR7265411 | coleoptile | 3dN | 35.49 | HC |
| SRR7265412 | coleoptile | 4dA | 21.47 | HC |
| SRR7265413 | coleoptile | 4dA | 33.50 | HC |
| SRR7265414 | coleoptile | 4dA | 48.01 | HC |
| SRR7265415 | coleoptile | 4dN | 23.24 | HC |
| SRR7265416 | coleoptile | 4dN | 13.05 | HC |
| SRR7265417 | coleoptile | 4dN | 13.87 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 14.15 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 6.85 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 15.51 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 4.90 | HC |
| SRR7265373 | embryo | dry seed 0 h | 14.28 | HC |
| SRR7265374 | embryo | dry seed 0 h | 16.46 | HC |
| SRR7265375 | embryo | dry seed 0 h | 3.75 | HC |
| SRR7265376 | embryo | 1hA | 19.81 | HC |
| SRR7265377 | embryo | 1hA | 20.74 | HC |
| SRR7265378 | embryo | 1hA | 19.28 | HC |
| SRR7265379 | embryo | 1hN | 14.89 | HC |
| SRR7265380 | embryo | 1hN | 6.53 | HC |
| SRR7265381 | embryo | 1hN | 16.74 | HC |
| SRR7265382 | embryo | 3hA | 15.34 | HC |
| SRR7265383 | embryo | 3hA | 19.41 | HC |
| SRR7265384 | embryo | 3hA | 14.67 | HC |
| SRR7265385 | embryo | 3hN | 17.44 | HC |
| SRR7265386 | embryo | 3hN | 11.54 | HC |
| SRR7265387 | embryo | 3hN | 6.58 | HC |
| SRR7265388 | embryo | 12hA | 11.04 | HC |
| SRR7265389 | embryo | 12hA | 6.46 | HC |
| SRR7265390 | embryo | 12hA | 7.51 | HC |
| SRR7265391 | embryo | 12hN | 11.24 | HC |
| SRR7265393 | embryo | 12hN | 5.08 | HC |
| SRR7265395 | embryo | 24hA | 21.30 | HC |
| SRR7265396 | embryo | 24hA | 5.78 | HC |
| SRR7265398 | embryo | 24hN | 12.27 | HC |
| SRR7265399 | embryo | 24hN | 9.30 | HC |
| SRR2338866 | endosprem | control | 6.44 | HC |
| SRR2338867 | endosprem | control | 5.40 | HC |
| SRR976168 | flag_leaf | wild_type | 50.25 | HC |
| SRR4457231 | flag_leaf | DAH4 | 3.78 | HC |
| SRR4457232 | flag_leaf | DAH4 | 6.70 | HC |
| SRR4457233 | flag_leaf | DAH4 | 5.51 | HC |
| SRR4457234 | flag_leaf | DAH12 | 12.56 | HC |
| SRR4457235 | flag_leaf | DAH12 | 22.84 | HC |
| SRR4457236 | flag_leaf | DAH12 | 64.12 | HC |
| SRR4457237 | flag_leaf | DAH20 | 54.80 | HC |
| SRR4457238 | flag_leaf | DAH20 | 21.10 | HC |
| SRR4457239 | flag_leaf | DAH20 | 83.83 | HC |
| SRR4457240 | flag_leaf | DAH28 | 40.84 | HC |
| SRR4457241 | flag_leaf | DAH28 | 54.32 | HC |
| SRR4457242 | flag_leaf | DAH28 | 53.40 | HC |
| SRR4457243 | flag_leaf | DAH36 | 22.49 | HC |
| SRR4457244 | flag_leaf | DAH36 | 7.84 | HC |
| SRR4457245 | flag_leaf | DAH36 | 13.36 | HC |
| SRR4457246 | flag_leaf | DAH44 | 30.72 | HC |
| SRR4457247 | flag_leaf | DAH44 | 12.02 | HC |
| SRR4457248 | flag_leaf | DAH44 | 26.71 | HC |
| SRR8240819 | leaf | wild_type | 8.35 | HC |
| SRR8240820 | leaf | wild_type | 8.40 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 9.36 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 52.33 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 46.96 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 43.01 | HC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 57.46 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 52.79 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 13.56 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 26.06 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 34.21 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 27.01 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 33.34 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 50.20 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 28.11 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 38.17 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 49.54 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 27.31 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 25.33 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 51.23 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 17.25 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 50.02 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 42.26 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 13.44 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 84.41 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 20.86 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 37.10 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 33.72 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 42.67 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 26.75 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 29.78 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 65.84 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 27.44 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 56.83 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 55.49 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 22.75 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 6.66 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 35.40 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 25.71 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 35.40 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 25.71 | HC |
| SRR1761528 | leaf | drought | 35.40 | HC |
| SRR1761529 | leaf | drought | 25.71 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 49.83 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 59.46 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 68.82 | HC |
| SRR6417967 | leaf | H2O_control | 27.03 | HC |
| SRR6417968 | leaf | H2O_control | 70.11 | HC |
| SRR6417969 | leaf | H2O_control | 81.53 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 7.71 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 16.21 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 6.30 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 12.78 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 14.25 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 4.42 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 31.52 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 38.09 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 3.78 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 7.46 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 14.79 | HC |
| SRR8611900 | leaf | Non-inoculated | 7.43 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 6.54 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 4.25 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 20.33 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 11.98 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 24.79 | HC |
| SRR6502088 | leaf | control | 6.07 | HC |
| SRR6502090 | leaf | control | 14.74 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 5.30 | HC |
| SRR6502100 | leaf | control | 10.11 | HC |
| SRR6502101 | leaf | control | 7.52 | HC |
| SRR5856931 | leaf | salt | 3.03 | HC |
| SRR5856936 | leaf | salt | 2.75 | HC |
| SRR5856938 | leaf | salt | 2.40 | HC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 13.40 | HC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 10.25 | HC |
| SRR6053395 | leaf | gibberellic acid (GA) | 18.85 | HC |
| SRR6053396 | leaf | gibberellic acid (GA) | 15.54 | HC |
| SRR6053397 | leaf | gibberellic acid (GA) | 14.65 | HC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 9.56 | HC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 8.32 | HC |
| SRR6168975 | leaf | none (control) | 6.08 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 6.58 | HC |
| SRR6168979 | leaf | none (control) | 34.87 | HC |
| SRR6168980 | leaf | none (control) | 15.32 | HC |
| SRR6168981 | leaf | none (control) | 5.12 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 11.56 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 3.66 | HC |
| SRR8582890 | panicle | AM | 3.00 | HC |
| SRR8582893 | panicle | PM | 7.28 | HC |
| SRR5110436 | panicle | Dawn + 3.5h | 5.12 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 4.59 | HC |
| SRR5126147 | root | "mock,1_day" | 47.80 | HC |
| SRR5126148 | root | "mock,1_day" | 32.61 | HC |
| SRR5126149 | root | "mock,1_day" | 23.61 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 90.00 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 50.74 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 100.27 | HC |
| SRR5126153 | root | "mock,7_days" | 33.99 | HC |
| SRR5126155 | root | "mock,7_days" | 18.54 | HC |
| SRR5126157 | root | "mock,7_days" | 18.28 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 61.30 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 49.89 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 16.93 | HC |
| SRR5126165 | root | "mock,14_days" | 56.42 | HC |
| SRR5126167 | root | "mock,14_days" | 42.15 | HC |
| SRR5126169 | root | "mock,14_days" | 53.57 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 38.92 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 54.75 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 12.83 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 40.46 | HC |
| SRR1213694 | root | wt | 18.87 | HC |
| SRR4947479 | root | control | 4.52 | HC |
| SRR4947480 | root | control | 9.05 | HC |
| SRR4947482 | root | Al | 8.52 | HC |
| SRR4947484 | root | Al | 8.60 | HC |
| SRR4947497 | root | control | 6.94 | HC |
| SRR4947503 | root | control | 5.33 | HC |
| SRR4947505 | root | control | 9.04 | HC |
| SRR4947506 | root | Al | 6.46 | HC |
| SRR4947508 | root | Al | 9.04 | HC |
| SRR4947509 | root | Al | 12.90 | HC |
| SRR6502092 | root | 100 mM NaCl | 12.07 | HC |
| SRR6502094 | root | control | 6.98 | HC |
| SRR6502095 | root | control | 8.78 | HC |
| SRR6502103 | root | 100 mM NaCl | 5.54 | HC |
| SRR1740434 | root_differentiation_zone | wt | 38.26 | HC |
| SRR1740435 | root_differentiation_zone | wt | 88.41 | HC |
| SRR1740436 | root_differentiation_zone | wt | 44.91 | HC |
| SRR1740431 | root_elongation_zone | wt | 37.97 | HC |
| SRR1740432 | root_elongation_zone | wt | 24.89 | HC |
| SRR1740433 | root_elongation_zone | wt | 47.10 | HC |
| SRR1740428 | root_meristematic_zone | wt | 19.43 | HC |
| SRR1740429 | root_meristematic_zone | wt | 38.00 | HC |
| SRR1740430 | root_meristematic_zone | wt | 9.75 | HC |
| SRR6441554 | seedling | wild_type | 11.21 | HC |
| SRR6441555 | seedling | wild_type | 10.17 | HC |
| SRR2857720 | seedling | drought_stress_1h | 11.62 | HC |
| SRR2857721 | seedling | drought_stress_6h | 21.19 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 10.46 | HC |
| SRR358791 | seedling | wt | 86.84 | HC |
| SRR358792 | seedling | wt | 85.12 | HC |
| SRR358793 | seedling | wt | 47.11 | HC |
| SRR358794 | seedling | wt | 44.93 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 15.69 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 14.36 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 17.41 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 13.57 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 12.79 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 13.75 | HC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 8.98 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 6.29 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 9.51 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 11.30 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 154.51 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 159.93 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 177.30 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 141.42 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 116.96 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 81.43 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 77.41 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 50.36 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 64.64 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 54.31 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 55.06 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 70.19 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 36.83 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 36.99 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 29.13 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 53.79 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 20.65 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 23.91 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 26.16 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 10.20 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 21.29 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 31.81 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 50.78 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 48.31 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 34.47 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 43.94 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 82.12 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 74.92 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 44.71 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 63.13 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 6.40 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 27.43 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 8.16 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 11.99 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 25.51 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 22.65 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 8.24 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 8.45 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 4.19 | HC |