| SRR5560727 | caryopsis | wild_type | 6.96 | HC |
| SRR5560728 | caryopsis | wild_type | 7.79 | HC |
| SRR5560729 | caryopsis | wild_type | 13.95 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 7.33 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 4.94 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 5.98 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 4.48 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 18.88 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 19.79 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 18.88 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 18.43 | HC |
| SRR2338867 | endosprem | control | 2.29 | HC |
| SRR2338868 | endosprem | high_temperature | 3.77 | HC |
| SRR2338869 | endosprem | high_temperature | 5.09 | HC |
| SRR4457235 | flag_leaf | DAH12 | 13.56 | HC |
| SRR4457236 | flag_leaf | DAH12 | 18.31 | HC |
| SRR4457237 | flag_leaf | DAH20 | 8.46 | HC |
| SRR4457238 | flag_leaf | DAH20 | 10.92 | HC |
| SRR4457239 | flag_leaf | DAH20 | 11.79 | HC |
| SRR4457240 | flag_leaf | DAH28 | 5.38 | HC |
| SRR4457241 | flag_leaf | DAH28 | 6.14 | HC |
| SRR8060835 | leaf | wild_type | 10.33 | HC |
| SRR8060836 | leaf | wild_type | 13.80 | HC |
| SRR8060837 | leaf | wild_type | 11.28 | HC |
| SRR8240825 | leaf | wild_type | 3.14 | HC |
| SRR8240820 | leaf | wild_type | 2.54 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 8.83 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 8.79 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 10.28 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 11.63 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 7.83 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 11.42 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 9.71 | HC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 14.08 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 6.83 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 10.11 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 9.99 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 12.45 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 9.46 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 9.96 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 17.63 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 13.95 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 11.48 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 13.65 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 20.33 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 15.38 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 10.78 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 12.13 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 7.01 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 6.43 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 6.08 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 11.14 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 7.73 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 9.60 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 5.85 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 8.02 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 10.36 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.84 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 11.75 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 11.66 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 10.05 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 12.76 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 19.24 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 17.41 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 15.55 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 12.76 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 19.24 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 17.41 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 15.55 | HC |
| SRR1761528 | leaf | drought | 12.76 | HC |
| SRR1761529 | leaf | drought | 19.24 | HC |
| SRR1761530 | leaf | control | 17.41 | HC |
| SRR1761531 | leaf | control | 15.55 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 3.94 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 5.37 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 6.74 | HC |
| SRR6417968 | leaf | H2O_control | 5.53 | HC |
| SRR6417969 | leaf | H2O_control | 4.16 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 19.84 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 15.98 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 25.05 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 21.75 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 30.06 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 28.45 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 24.06 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 21.43 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 20.13 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 26.56 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 30.64 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 27.77 | HC |
| SRR8611900 | leaf | Non-inoculated | 19.44 | HC |
| SRR8611901 | leaf | Non-inoculated | 19.75 | HC |
| SRR8611902 | leaf | Non-inoculated | 19.56 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 31.89 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 32.17 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 34.69 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 6.72 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 11.51 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 46.88 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 26.68 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 25.36 | HC |
| SRR6502088 | leaf | control | 33.28 | HC |
| SRR6502089 | leaf | control | 31.15 | HC |
| SRR6502090 | leaf | control | 35.91 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 37.30 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 25.58 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 9.64 | HC |
| SRR6502100 | leaf | control | 28.30 | HC |
| SRR6502101 | leaf | control | 29.47 | HC |
| SRR6502102 | leaf | control | 28.24 | HC |
| SRR6168973 | leaf | none (control) | 4.74 | HC |
| SRR6168974 | leaf | none (control) | 5.67 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 10.13 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 5.96 | HC |
| SRR6168979 | leaf | none (control) | 4.52 | HC |
| SRR6168980 | leaf | none (control) | 3.14 | HC |
| SRR6168981 | leaf | none (control) | 4.60 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 5.87 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 9.67 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 15.20 | HC |
| SRR8582888 | panicle | AM | 3.76 | HC |
| SRR8582889 | panicle | AM | 5.88 | HC |
| SRR8582890 | panicle | AM | 4.83 | HC |
| SRR8582891 | panicle | PM | 10.36 | HC |
| SRR8582893 | panicle | PM | 13.83 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 15.16 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 13.56 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 22.15 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 15.60 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 25.29 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 37.67 | HC |
| SRR5126147 | root | "mock,1_day" | 6.49 | HC |
| SRR5126148 | root | "mock,1_day" | 4.93 | HC |
| SRR5126149 | root | "mock,1_day" | 5.79 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 7.08 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 9.56 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 4.86 | HC |
| SRR5126155 | root | "mock,7_days" | 6.14 | HC |
| SRR5126157 | root | "mock,7_days" | 7.54 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 8.13 | HC |
| SRR5126167 | root | "mock,14_days" | 4.44 | HC |
| SRR5126169 | root | "mock,14_days" | 6.80 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 9.87 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 5.35 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 3.14 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 3.82 | HC |
| SRR6502091 | root | 100 mM NaCl | 10.57 | HC |
| SRR6502092 | root | 100 mM NaCl | 18.33 | HC |
| SRR6502093 | root | 100 mM NaCl | 13.59 | HC |
| SRR6502094 | root | control | 10.02 | HC |
| SRR6502095 | root | control | 13.94 | HC |
| SRR6502096 | root | control | 8.37 | HC |
| SRR6502103 | root | 100 mM NaCl | 10.35 | HC |
| SRR6502104 | root | 100 mM NaCl | 12.25 | HC |
| SRR6502105 | root | 100 mM NaCl | 19.84 | HC |
| SRR6502106 | root | control | 10.69 | HC |
| SRR6502107 | root | control | 5.60 | HC |
| SRR6502108 | root | control | 10.40 | HC |
| SRR6441554 | seedling | wild_type | 11.12 | HC |
| SRR6441555 | seedling | wild_type | 11.56 | HC |
| SRR3098741 | seedling | wt | 11.15 | HC |
| SRR3098742 | seedling | wt | 11.36 | HC |
| SRR3098743 | seedling | wt | 12.87 | HC |
| SRR2857719 | seedling | drought_stress_0h | 15.22 | HC |
| SRR2857720 | seedling | drought_stress_1h | 15.55 | HC |
| SRR2857721 | seedling | drought_stress_6h | 24.00 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 13.49 | HC |
| SRR1944583 | seedling | no_treatment | 27.08 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 5.67 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 6.18 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 10.16 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 14.50 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 11.37 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 13.12 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 12.35 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 14.27 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 15.36 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 25.01 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 18.11 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 16.44 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 16.98 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 22.57 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 8.87 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 4.54 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 8.81 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 8.01 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 9.64 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 5.15 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 5.84 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 8.95 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 9.35 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 12.89 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 5.16 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 8.03 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 6.35 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 4.24 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 11.82 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 10.26 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 13.93 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 16.39 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 9.13 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 14.27 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 16.89 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 17.44 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 17.24 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 15.57 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 19.05 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 14.44 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 15.41 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 14.24 | HC |