| SRR4457250 | 2nd_leaf | DAH4 | 5.78 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 5.64 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 9.35 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 7.50 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 7.31 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 9.94 | HC |
| SRR4457256 | 2nd_leaf | DAH20 | 9.50 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 7.50 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 9.65 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 8.77 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 15.03 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 6.34 | HC |
| SRR4457264 | 2nd_leaf | DAH44 | 9.91 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 11.43 | HC |
| SRR4457266 | 2nd_leaf | DAH44 | 7.84 | HC |
| SRR358795 | callus | wt | 10.65 | HC |
| SRR358797 | callus | wt | 11.26 | HC |
| SRR358798 | callus | wt | 10.97 | HC |
| SRR5560727 | caryopsis | wild_type | 9.51 | HC |
| SRR5560728 | caryopsis | wild_type | 9.05 | HC |
| SRR5560729 | caryopsis | wild_type | 8.88 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 6.14 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 7.75 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 4.02 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 6.08 | HC |
| SRR7265402 | coleoptile | 2dA | 4.05 | HC |
| SRR7265405 | coleoptile | 2dN | 3.96 | HC |
| SRR7265409 | coleoptile | 3dN | 4.52 | HC |
| SRR7265410 | coleoptile | 3dN | 3.92 | HC |
| SRR7265411 | coleoptile | 3dN | 3.76 | HC |
| SRR7265415 | coleoptile | 4dN | 5.25 | HC |
| SRR7265416 | coleoptile | 4dN | 4.96 | HC |
| SRR7265373 | embryo | dry seed 0 h | 3.96 | HC |
| SRR7265375 | embryo | dry seed 0 h | 3.13 | HC |
| SRR7265376 | embryo | 1hA | 7.62 | HC |
| SRR7265377 | embryo | 1hA | 6.79 | HC |
| SRR7265378 | embryo | 1hA | 5.14 | HC |
| SRR7265379 | embryo | 1hN | 5.98 | HC |
| SRR7265380 | embryo | 1hN | 4.53 | HC |
| SRR7265381 | embryo | 1hN | 7.53 | HC |
| SRR7265383 | embryo | 3hA | 6.59 | HC |
| SRR7265384 | embryo | 3hA | 5.21 | HC |
| SRR7265386 | embryo | 3hN | 4.13 | HC |
| SRR7265387 | embryo | 3hN | 4.12 | HC |
| SRR7265391 | embryo | 12hN | 8.17 | HC |
| SRR7265392 | embryo | 12hN | 8.75 | HC |
| SRR7265393 | embryo | 12hN | 8.74 | HC |
| SRR7265396 | embryo | 24hA | 5.06 | HC |
| SRR7265397 | embryo | 24hN | 7.32 | HC |
| SRR7265398 | embryo | 24hN | 9.42 | HC |
| SRR7265399 | embryo | 24hN | 8.69 | HC |
| SRR4457231 | flag_leaf | DAH4 | 3.62 | HC |
| SRR4457232 | flag_leaf | DAH4 | 7.55 | HC |
| SRR4457233 | flag_leaf | DAH4 | 6.70 | HC |
| SRR4457234 | flag_leaf | DAH12 | 6.02 | HC |
| SRR4457236 | flag_leaf | DAH12 | 4.61 | HC |
| SRR4457239 | flag_leaf | DAH20 | 4.68 | HC |
| SRR4457240 | flag_leaf | DAH28 | 5.48 | HC |
| SRR4457241 | flag_leaf | DAH28 | 4.70 | HC |
| SRR4457242 | flag_leaf | DAH28 | 5.51 | HC |
| SRR4457243 | flag_leaf | DAH36 | 5.12 | HC |
| SRR4457244 | flag_leaf | DAH36 | 6.11 | HC |
| SRR4457245 | flag_leaf | DAH36 | 4.07 | HC |
| SRR4457246 | flag_leaf | DAH44 | 9.36 | HC |
| SRR4457247 | flag_leaf | DAH44 | 8.83 | HC |
| SRR4457248 | flag_leaf | DAH44 | 8.38 | HC |
| SRR1213690 | flower | wt(flower buds) | 4.69 | HC |
| SRR1213691 | flower | wt | 4.48 | HC |
| SRR8060835 | leaf | wild_type | 10.17 | HC |
| SRR8060836 | leaf | wild_type | 12.61 | HC |
| SRR8060837 | leaf | wild_type | 10.40 | HC |
| SRR8240820 | leaf | wild_type | 2.51 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 6.32 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 5.90 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 5.37 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 8.51 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 5.27 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.56 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 6.52 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 5.41 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 4.99 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 4.97 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 5.13 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.13 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 8.11 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 7.99 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 8.27 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 9.20 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 8.27 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 9.20 | HC |
| SRR1761530 | leaf | control | 8.27 | HC |
| SRR1761531 | leaf | control | 9.20 | HC |
| SRR504365 | leaf | wt | 18.44 | HC |
| SRR6417968 | leaf | H2O_control | 4.38 | HC |
| SRR6417969 | leaf | H2O_control | 4.85 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 4.25 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 4.49 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 5.10 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 3.77 | HC |
| SRR8611900 | leaf | Non-inoculated | 6.32 | HC |
| SRR8611901 | leaf | Non-inoculated | 5.34 | HC |
| SRR8611902 | leaf | Non-inoculated | 5.99 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 7.52 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 7.59 | HC |
| SRR1213692 | leaf | wt | 10.53 | HC |
| SRR1213693 | leaf | wt | 5.71 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 8.07 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 7.94 | HC |
| SRR6502088 | leaf | control | 7.70 | HC |
| SRR6502089 | leaf | control | 7.54 | HC |
| SRR6502090 | leaf | control | 5.17 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 4.88 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 10.38 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 5.91 | HC |
| SRR6502100 | leaf | control | 7.22 | HC |
| SRR6502101 | leaf | control | 6.11 | HC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 9.20 | HC |
| SRR6053397 | leaf | gibberellic acid (GA) | 8.53 | HC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 9.89 | HC |
| SRR6168973 | leaf | none (control) | 11.35 | HC |
| SRR6168974 | leaf | none (control) | 12.65 | HC |
| SRR6168975 | leaf | none (control) | 10.53 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 11.47 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 16.16 | HC |
| SRR8582889 | panicle | AM | 1.75 | HC |
| SRR8582890 | panicle | AM | 3.42 | HC |
| SRR8582891 | panicle | PM | 12.65 | HC |
| SRR8582892 | panicle | PM | 16.38 | HC |
| SRR8582893 | panicle | PM | 14.28 | HC |
| SRR5110429 | panicle | Dawn | 5.02 | HC |
| SRR5110432 | panicle | Dawn | 4.26 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 3.25 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 5.76 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 7.41 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 8.14 | HC |
| SRR5110445 | panicle | Dusk | 6.22 | HC |
| SRR5110446 | panicle | Dusk | 9.23 | HC |
| SRR5110447 | panicle | Dusk | 7.69 | HC |
| SRR5110448 | panicle | Dusk | 8.13 | HC |
| SRR5110449 | panicle | Dawn + 14h | 6.78 | HC |
| SRR5110450 | panicle | Dawn + 14h | 5.41 | HC |
| SRR5110451 | panicle | Dawn + 14h | 6.57 | HC |
| SRR5110452 | panicle | Dawn + 14h | 7.34 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 5.85 | HC |
| SRR5110454 | panicle | Dawn + 17.5h | 4.15 | HC |
| SRR5110455 | panicle | Dawn + 17.5h | 6.22 | HC |
| SRR5110457 | panicle | Dawn + 21h | 3.96 | HC |
| SRR5110460 | panicle | Dawn + 21h | 5.13 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 4.13 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 5.63 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 5.23 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 6.81 | HC |
| SRR1213695 | root | wt | 5.48 | HC |
| SRR1740429 | root_meristematic_zone | wt | 4.30 | HC |
| SRR1740430 | root_meristematic_zone | wt | 5.32 | HC |
| SRR6441554 | seedling | wild_type | 4.07 | HC |
| SRR6441555 | seedling | wild_type | 3.75 | HC |
| SRR2154086 | seedling | wt | 5.94 | HC |
| SRR2154082 | seedling | wt | 5.25 | HC |
| SRR2154083 | seedling | wt | 6.44 | HC |
| SRR2154084 | seedling | wt | 6.93 | HC |
| SRR2154085 | seedling | wt | 7.27 | HC |
| SRR2154087 | seedling | wt | 6.84 | HC |
| SRR3098741 | seedling | wt | 5.15 | HC |
| SRR3098742 | seedling | wt | 5.31 | HC |
| SRR3098743 | seedling | wt | 5.52 | HC |
| SRR2857719 | seedling | drought_stress_0h | 5.44 | HC |
| SRR2857720 | seedling | drought_stress_1h | 4.72 | HC |
| SRR358791 | seedling | wt | 8.47 | HC |
| SRR358792 | seedling | wt | 8.52 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 3.36 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 6.33 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 5.69 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 5.57 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 5.46 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 7.91 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 9.48 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 13.23 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 13.15 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 4.15 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 3.43 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 4.80 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 5.89 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.66 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 4.84 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 5.05 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 13.12 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 10.45 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 7.86 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 8.45 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 10.76 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 9.87 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 9.55 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 8.79 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 9.08 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 9.73 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 8.85 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 9.01 | HC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 4.71 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 5.03 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 3.69 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 3.62 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 4.68 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 2.93 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 3.69 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 3.51 | HC |