| SRR3745126 | anther | wt | 13.69 | HC |
| SRR3745127 | anther | wt | 18.23 | HC |
| SRR6320473 | carpel | wt | 679.89 | HC |
| SRR6320498 | carpel | wt | 418.08 | HC |
| SRR5560727 | caryopsis | wild_type | 43.33 | HC |
| SRR5560728 | caryopsis | wild_type | 491.95 | HC |
| SRR5560729 | caryopsis | wild_type | 55.63 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 98.21 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 682.77 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 444.92 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 765.54 | HC |
| SRR7265400 | coleoptile | 2dA | 434.73 | HC |
| SRR7265401 | coleoptile | 2dA | 397.50 | HC |
| SRR7265402 | coleoptile | 2dA | 268.09 | HC |
| SRR7265403 | coleoptile | 2dN | 22.88 | HC |
| SRR7265405 | coleoptile | 2dN | 32.07 | HC |
| SRR7265406 | coleoptile | 3dA | 527.93 | HC |
| SRR7265407 | coleoptile | 3dA | 631.85 | HC |
| SRR7265408 | coleoptile | 3dA | 451.90 | HC |
| SRR7265409 | coleoptile | 3dN | 126.10 | HC |
| SRR7265410 | coleoptile | 3dN | 106.18 | HC |
| SRR7265411 | coleoptile | 3dN | 10.01 | HC |
| SRR7265412 | coleoptile | 4dA | 4.95 | HC |
| SRR7265414 | coleoptile | 4dA | 14.21 | HC |
| SRR7265415 | coleoptile | 4dN | 49.89 | HC |
| SRR7265416 | coleoptile | 4dN | 68.98 | HC |
| SRR7265417 | coleoptile | 4dN | 10.30 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 155.99 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 368.96 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 375.18 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 155.38 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 432.73 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 55.27 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 12.54 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 13.03 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 220.40 | HC |
| SRR7265374 | embryo | dry seed 0 h | 5.75 | HC |
| SRR7265376 | embryo | 1hA | 52.68 | HC |
| SRR7265377 | embryo | 1hA | 25.28 | HC |
| SRR7265378 | embryo | 1hA | 8.10 | HC |
| SRR7265379 | embryo | 1hN | 19.02 | HC |
| SRR7265380 | embryo | 1hN | 6.67 | HC |
| SRR7265381 | embryo | 1hN | 5.31 | HC |
| SRR7265382 | embryo | 3hA | 28.21 | HC |
| SRR7265383 | embryo | 3hA | 6.74 | HC |
| SRR7265384 | embryo | 3hA | 6.81 | HC |
| SRR7265385 | embryo | 3hN | 4.86 | HC |
| SRR7265386 | embryo | 3hN | 41.65 | HC |
| SRR7265387 | embryo | 3hN | 14.56 | HC |
| SRR7265388 | embryo | 12hA | 8.48 | HC |
| SRR7265389 | embryo | 12hA | 94.44 | HC |
| SRR7265390 | embryo | 12hA | 116.56 | HC |
| SRR7265391 | embryo | 12hN | 9.03 | HC |
| SRR7265393 | embryo | 12hN | 11.86 | HC |
| SRR7265394 | embryo | 24hA | 8.55 | HC |
| SRR7265395 | embryo | 24hA | 416.05 | HC |
| SRR7265396 | embryo | 24hA | 259.50 | HC |
| SRR7265399 | embryo | 24hN | 17.07 | HC |
| SRR2338867 | endosprem | control | 42.88 | HC |
| SRR2338868 | endosprem | high_temperature | 5.02 | HC |
| SRR2338869 | endosprem | high_temperature | 3.65 | HC |
| SRR1213690 | flower | wt(flower buds) | 12.28 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 333.23 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 60.74 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 110.87 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 114.69 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 55.83 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 85.39 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 121.14 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 88.84 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 37.13 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 160.92 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 162.92 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 46.17 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 147.40 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 262.38 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 9.53 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 148.44 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 121.61 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 270.40 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 109.38 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 43.52 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 138.52 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 65.23 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 123.09 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 66.52 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 66.48 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 178.70 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 206.06 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 42.62 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 38.40 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 23.94 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 137.48 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 19.01 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 137.47 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 19.01 | HC |
| SRR1761528 | leaf | drought | 137.47 | HC |
| SRR1761529 | leaf | drought | 19.01 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 45.57 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 22.69 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 24.65 | HC |
| SRR6417968 | leaf | H2O_control | 3.81 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 163.29 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 133.28 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 14.24 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 26.50 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 67.46 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 93.92 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 7.83 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 32.20 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 21.27 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 88.33 | HC |
| SRR8611900 | leaf | Non-inoculated | 19.84 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 175.74 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 12.69 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 10.15 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 29.33 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 23.92 | HC |
| SRR6502088 | leaf | control | 12.08 | HC |
| SRR6502089 | leaf | control | 5.94 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 12.29 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 9.20 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 14.16 | HC |
| SRR6502101 | leaf | control | 7.59 | HC |
| SRR5856927 | leaf | control | 50.30 | HC |
| SRR5856928 | leaf | control | 4.89 | HC |
| SRR5856929 | leaf | control | 92.86 | HC |
| SRR5856930 | leaf | salt | 145.19 | HC |
| SRR5856931 | leaf | salt | 219.71 | HC |
| SRR5856932 | leaf | salt | 380.17 | HC |
| SRR5856933 | leaf | control | 21.25 | HC |
| SRR5856934 | leaf | control | 31.86 | HC |
| SRR5856935 | leaf | control | 168.64 | HC |
| SRR5856936 | leaf | salt | 382.67 | HC |
| SRR5856937 | leaf | salt | 916.06 | HC |
| SRR5856938 | leaf | salt | 498.09 | HC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 62.17 | HC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 21.76 | HC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 10.66 | HC |
| SRR6053395 | leaf | gibberellic acid (GA) | 108.95 | HC |
| SRR6053396 | leaf | gibberellic acid (GA) | 154.13 | HC |
| SRR6053397 | leaf | gibberellic acid (GA) | 99.69 | HC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 8.31 | HC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 31.01 | HC |
| SRR6168973 | leaf | none (control) | 29.77 | HC |
| SRR6168974 | leaf | none (control) | 708.87 | HC |
| SRR6168975 | leaf | none (control) | 112.68 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 61.26 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 54.89 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 78.25 | HC |
| SRR6168979 | leaf | none (control) | 727.25 | HC |
| SRR6168980 | leaf | none (control) | 807.18 | HC |
| SRR6168981 | leaf | none (control) | 1278.58 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 1233.96 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 696.35 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 1094.47 | HC |
| SRR8582893 | panicle | PM | 11.08 | HC |
| SRR5110429 | panicle | Dawn | 9.45 | HC |
| SRR5110436 | panicle | Dawn + 3.5h | 11.92 | HC |
| SRR5110437 | panicle | Dawn + 7h | 29.94 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 22.25 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 172.34 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 214.95 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 98.55 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 145.95 | HC |
| SRR5126147 | root | "mock,1_day" | 123.39 | HC |
| SRR5126148 | root | "mock,1_day" | 12.12 | HC |
| SRR5126149 | root | "mock,1_day" | 150.77 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 70.62 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 135.92 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 531.67 | HC |
| SRR5126157 | root | "mock,7_days" | 9.72 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 65.59 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 11.62 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 26.20 | HC |
| SRR5126165 | root | "mock,14_days" | 20.68 | HC |
| SRR5126167 | root | "mock,14_days" | 88.36 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 168.30 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 157.76 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 99.53 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 168.70 | HC |
| SRR4947481 | root | control | 24.77 | HC |
| SRR4947482 | root | Al | 51.74 | HC |
| SRR4947488 | root | control | 8.65 | HC |
| SRR4947489 | root | control | 17.94 | HC |
| SRR4947490 | root | Al | 47.00 | HC |
| SRR4947491 | root | Al | 39.73 | HC |
| SRR4947497 | root | control | 50.35 | HC |
| SRR4947498 | root | Al | 82.34 | HC |
| SRR4947499 | root | Al | 21.05 | HC |
| SRR4947501 | root | Al | 49.58 | HC |
| SRR4947502 | root | control | 27.48 | HC |
| SRR4947504 | root | control | 27.27 | HC |
| SRR4947505 | root | control | 7.59 | HC |
| SRR4947507 | root | Al | 13.53 | HC |
| SRR4947508 | root | Al | 52.23 | HC |
| SRR6502091 | root | 100 mM NaCl | 293.56 | HC |
| SRR6502092 | root | 100 mM NaCl | 247.53 | HC |
| SRR6502093 | root | 100 mM NaCl | 69.56 | HC |
| SRR6502094 | root | control | 252.20 | HC |
| SRR6502095 | root | control | 242.24 | HC |
| SRR6502096 | root | control | 245.85 | HC |
| SRR6502103 | root | 100 mM NaCl | 218.23 | HC |
| SRR6502104 | root | 100 mM NaCl | 56.18 | HC |
| SRR6502105 | root | 100 mM NaCl | 200.30 | HC |
| SRR6502106 | root | control | 129.85 | HC |
| SRR6502107 | root | control | 91.77 | HC |
| SRR6502108 | root | control | 69.26 | HC |
| SRR1740434 | root_differentiation_zone | wt | 601.40 | HC |
| SRR1740435 | root_differentiation_zone | wt | 213.71 | HC |
| SRR1740436 | root_differentiation_zone | wt | 62.57 | HC |
| SRR1740431 | root_elongation_zone | wt | 868.80 | HC |
| SRR1740432 | root_elongation_zone | wt | 632.29 | HC |
| SRR1740433 | root_elongation_zone | wt | 535.65 | HC |
| SRR1740428 | root_meristematic_zone | wt | 1133.71 | HC |
| SRR1740429 | root_meristematic_zone | wt | 1068.50 | HC |
| SRR1740430 | root_meristematic_zone | wt | 544.65 | HC |
| SRR3098741 | seedling | wt | 3.81 | HC |
| SRR2857719 | seedling | drought_stress_0h | 6.55 | HC |
| SRR2857721 | seedling | drought_stress_6h | 504.37 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 15.17 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 3.58 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 16.96 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 11.87 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 9.56 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 12.51 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 4.56 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 11.29 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 23.96 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 6.08 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 14.39 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 18.27 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 31.74 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 31.64 | HC |
| SRR1617559 | shoot_apical_meristem | no collect | 13.09 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 17.28 | HC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 12.25 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 4.28 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 19.32 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 29.03 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 52.04 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 32.84 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 25.25 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 19.17 | HC |