| SRR5560728 | caryopsis | wild_type | 9.72 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 7.81 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 8.17 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 15.31 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 12.26 | HC |
| SRR7265400 | coleoptile | 2dA | 14.43 | HC |
| SRR7265401 | coleoptile | 2dA | 22.19 | HC |
| SRR7265402 | coleoptile | 2dA | 19.16 | HC |
| SRR7265403 | coleoptile | 2dN | 5.36 | HC |
| SRR7265404 | coleoptile | 2dN | 4.12 | HC |
| SRR7265405 | coleoptile | 2dN | 4.21 | HC |
| SRR7265406 | coleoptile | 3dA | 64.59 | HC |
| SRR7265407 | coleoptile | 3dA | 58.04 | HC |
| SRR7265408 | coleoptile | 3dA | 41.58 | HC |
| SRR7265412 | coleoptile | 4dA | 3.74 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 19.08 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 18.53 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 13.89 | HC |
| SRR7265388 | embryo | 12hA | 43.14 | HC |
| SRR7265389 | embryo | 12hA | 33.19 | HC |
| SRR7265390 | embryo | 12hA | 43.55 | HC |
| SRR7265391 | embryo | 12hN | 15.03 | HC |
| SRR7265392 | embryo | 12hN | 5.94 | HC |
| SRR7265393 | embryo | 12hN | 9.99 | HC |
| SRR7265394 | embryo | 24hA | 7.82 | HC |
| SRR7265395 | embryo | 24hA | 16.03 | HC |
| SRR7265396 | embryo | 24hA | 11.63 | HC |
| SRR4457236 | flag_leaf | DAH12 | 5.07 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 6.01 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 13.37 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 6.63 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 7.09 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 7.99 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 7.99 | HC |
| SRR1761529 | leaf | drought | 7.99 | HC |
| SRR504365 | leaf | wt | 4.24 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 16.85 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 22.35 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 13.52 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 16.29 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 4.15 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 40.61 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 15.27 | HC |
| SRR8611900 | leaf | Non-inoculated | 5.78 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 3.92 | HC |
| SRR1213692 | leaf | wt | 6.86 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 5.37 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 7.19 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 6.73 | HC |
| SRR6502088 | leaf | control | 7.74 | HC |
| SRR6502089 | leaf | control | 5.02 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 5.02 | HC |
| SRR6502100 | leaf | control | 5.05 | HC |
| SRR6502102 | leaf | control | 5.11 | HC |
| SRR5856929 | leaf | control | 3.58 | HC |
| SRR5856933 | leaf | control | 3.25 | HC |
| SRR5856934 | leaf | control | 2.77 | HC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 10.35 | HC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 9.93 | HC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 10.02 | HC |
| SRR1633182 | panicle | WT | 5.67 | HC |
| SRR1633185 | panicle | WT | 6.33 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 24.24 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 27.71 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 12.96 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 16.45 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 8.07 | HC |
| SRR5126167 | root | "mock,14_days" | 10.72 | HC |
| SRR1213694 | root | wt | 17.23 | HC |
| SRR1740434 | root_differentiation_zone | wt | 25.16 | HC |
| SRR1740435 | root_differentiation_zone | wt | 6.68 | HC |
| SRR1740431 | root_elongation_zone | wt | 24.91 | HC |
| SRR1740428 | root_meristematic_zone | wt | 6.17 | HC |
| SRR6441555 | seedling | wild_type | 3.16 | HC |
| SRR2154082 | seedling | wt | 10.25 | HC |
| SRR2154083 | seedling | wt | 9.02 | HC |
| SRR2154084 | seedling | wt | 8.64 | HC |
| SRR2154085 | seedling | wt | 5.22 | HC |
| SRR3098742 | seedling | wt | 3.34 | HC |
| SRR2857720 | seedling | drought_stress_1h | 15.62 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 5.16 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 9.92 | HC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 14.10 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 7.12 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 8.55 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 9.16 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 8.04 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 4.12 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 8.48 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 4.54 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 3.51 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 4.93 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 3.85 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 4.01 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 4.87 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 7.92 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 4.02 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 4.08 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 3.75 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 11.62 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 8.68 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 10.52 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 6.64 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 5.94 | HC |