| SRR4457249 | 2nd_leaf | DAH4 | 20.19 | HC |
| SRR4457250 | 2nd_leaf | DAH4 | 17.40 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 19.14 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 11.86 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 11.63 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 12.40 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 8.99 | HC |
| SRR4457256 | 2nd_leaf | DAH20 | 8.94 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 11.94 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 4.28 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 5.27 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 5.71 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 15.61 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 10.04 | HC |
| SRR4457263 | 2nd_leaf | DAH36 | 15.26 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 8.98 | HC |
| SRR358795 | callus | wt | 31.41 | HC |
| SRR358796 | callus | wt | 23.97 | HC |
| SRR358797 | callus | wt | 28.54 | HC |
| SRR358798 | callus | wt | 29.67 | HC |
| SRR5560727 | caryopsis | wild_type | 50.38 | HC |
| SRR5560728 | caryopsis | wild_type | 55.73 | HC |
| SRR5560729 | caryopsis | wild_type | 51.36 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 14.00 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 17.02 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 9.13 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 15.43 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 25.64 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 17.29 | HC |
| SRR2338866 | endosprem | control | 22.98 | HC |
| SRR2338867 | endosprem | control | 5.41 | HC |
| SRR2338868 | endosprem | high_temperature | 4.94 | HC |
| SRR2338869 | endosprem | high_temperature | 12.28 | HC |
| SRR976168 | flag_leaf | wild_type | 10.38 | HC |
| SRR4457231 | flag_leaf | DAH4 | 15.30 | HC |
| SRR4457232 | flag_leaf | DAH4 | 13.18 | HC |
| SRR4457233 | flag_leaf | DAH4 | 11.38 | HC |
| SRR4457234 | flag_leaf | DAH12 | 9.08 | HC |
| SRR4457235 | flag_leaf | DAH12 | 8.04 | HC |
| SRR4457236 | flag_leaf | DAH12 | 7.57 | HC |
| SRR4457237 | flag_leaf | DAH20 | 4.61 | HC |
| SRR4457239 | flag_leaf | DAH20 | 6.93 | HC |
| SRR4457243 | flag_leaf | DAH36 | 11.60 | HC |
| SRR4457244 | flag_leaf | DAH36 | 9.67 | HC |
| SRR4457245 | flag_leaf | DAH36 | 8.74 | HC |
| SRR4457246 | flag_leaf | DAH44 | 4.60 | HC |
| SRR1213690 | flower | wt(flower buds) | 25.31 | HC |
| SRR1213691 | flower | wt | 23.16 | HC |
| SRR8240824 | leaf | wild_type | 7.16 | HC |
| SRR8240825 | leaf | wild_type | 5.92 | HC |
| SRR8240826 | leaf | wild_type | 5.36 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 15.05 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 11.66 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 14.34 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 9.29 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 17.64 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 19.83 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 26.86 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 21.91 | HC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 13.44 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 23.85 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 18.18 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 23.28 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 27.29 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 17.35 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 18.77 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 26.14 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 22.71 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 23.50 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 27.68 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 13.30 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 16.06 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 19.83 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 18.79 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 22.86 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 26.87 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 11.09 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 21.48 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 30.77 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 20.56 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 17.45 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 22.18 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 24.50 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 22.83 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 25.24 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 19.32 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 21.85 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 20.15 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 16.63 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 14.59 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 18.99 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 11.39 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 11.42 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 7.14 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 8.44 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 11.39 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 11.42 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 7.14 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 8.44 | HC |
| SRR1761528 | leaf | drought | 11.39 | HC |
| SRR1761529 | leaf | drought | 11.42 | HC |
| SRR1761530 | leaf | control | 7.14 | HC |
| SRR1761531 | leaf | control | 8.44 | HC |
| SRR504365 | leaf | wt | 18.29 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 10.89 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 8.61 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 6.85 | HC |
| SRR6417967 | leaf | H2O_control | 8.10 | HC |
| SRR6417968 | leaf | H2O_control | 11.66 | HC |
| SRR6417969 | leaf | H2O_control | 7.21 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 5.13 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 5.31 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 5.84 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 7.77 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 4.88 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 5.44 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 5.63 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 5.78 | HC |
| SRR8611900 | leaf | Non-inoculated | 10.71 | HC |
| SRR8611901 | leaf | Non-inoculated | 8.77 | HC |
| SRR8611902 | leaf | Non-inoculated | 10.78 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 14.67 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 18.21 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 15.14 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 17.12 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 15.60 | HC |
| SRR1213692 | leaf | wt | 10.70 | HC |
| SRR1213693 | leaf | wt | 9.81 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 10.16 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 13.16 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 10.39 | HC |
| SRR6502088 | leaf | control | 7.20 | HC |
| SRR6502089 | leaf | control | 10.32 | HC |
| SRR6502090 | leaf | control | 6.23 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 9.69 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 11.48 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 12.85 | HC |
| SRR6502100 | leaf | control | 8.94 | HC |
| SRR6502101 | leaf | control | 8.87 | HC |
| SRR6502102 | leaf | control | 8.92 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 9.56 | HC |
| SRR8582888 | panicle | AM | 6.94 | HC |
| SRR8582889 | panicle | AM | 6.45 | HC |
| SRR8582890 | panicle | AM | 9.28 | HC |
| SRR8582891 | panicle | PM | 9.19 | HC |
| SRR8582892 | panicle | PM | 9.40 | HC |
| SRR8582893 | panicle | PM | 9.47 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 20.05 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 5.61 | HC |
| SRR1633182 | panicle | WT | 8.20 | HC |
| SRR1633185 | panicle | WT | 12.85 | HC |
| SRR5126147 | root | "mock,1_day" | 25.82 | HC |
| SRR5126148 | root | "mock,1_day" | 22.63 | HC |
| SRR5126149 | root | "mock,1_day" | 29.45 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 25.33 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 30.05 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 26.42 | HC |
| SRR5126153 | root | "mock,7_days" | 26.74 | HC |
| SRR5126155 | root | "mock,7_days" | 23.77 | HC |
| SRR5126157 | root | "mock,7_days" | 29.26 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 25.59 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 27.89 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 24.31 | HC |
| SRR5126165 | root | "mock,14_days" | 25.91 | HC |
| SRR5126167 | root | "mock,14_days" | 21.56 | HC |
| SRR5126169 | root | "mock,14_days" | 26.51 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 26.67 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 23.48 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 21.04 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 14.77 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 16.04 | HC |
| SRR1213694 | root | wt | 16.24 | HC |
| SRR1213695 | root | wt | 8.88 | HC |
| SRR6502091 | root | 100 mM NaCl | 25.65 | HC |
| SRR6502092 | root | 100 mM NaCl | 27.29 | HC |
| SRR6502093 | root | 100 mM NaCl | 21.22 | HC |
| SRR6502094 | root | control | 20.25 | HC |
| SRR6502095 | root | control | 20.80 | HC |
| SRR6502096 | root | control | 20.31 | HC |
| SRR6502103 | root | 100 mM NaCl | 29.63 | HC |
| SRR6502104 | root | 100 mM NaCl | 26.32 | HC |
| SRR6502105 | root | 100 mM NaCl | 26.58 | HC |
| SRR6502106 | root | control | 22.45 | HC |
| SRR6502107 | root | control | 21.87 | HC |
| SRR6502108 | root | control | 22.61 | HC |
| SRR1740434 | root_differentiation_zone | wt | 15.21 | HC |
| SRR1740435 | root_differentiation_zone | wt | 23.35 | HC |
| SRR1740436 | root_differentiation_zone | wt | 29.19 | HC |
| SRR1740431 | root_elongation_zone | wt | 16.84 | HC |
| SRR1740432 | root_elongation_zone | wt | 28.04 | HC |
| SRR1740433 | root_elongation_zone | wt | 27.06 | HC |
| SRR1740428 | root_meristematic_zone | wt | 23.53 | HC |
| SRR1740429 | root_meristematic_zone | wt | 24.00 | HC |
| SRR1740430 | root_meristematic_zone | wt | 24.13 | HC |
| SRR6441554 | seedling | wild_type | 7.12 | HC |
| SRR6441555 | seedling | wild_type | 6.71 | HC |
| SRR2154086 | seedling | wt | 17.91 | HC |
| SRR2154085 | seedling | wt | 15.87 | HC |
| SRR3098741 | seedling | wt | 12.24 | HC |
| SRR3098742 | seedling | wt | 9.54 | HC |
| SRR3098743 | seedling | wt | 14.91 | HC |
| SRR2857719 | seedling | drought_stress_0h | 21.20 | HC |
| SRR2857720 | seedling | drought_stress_1h | 9.78 | HC |
| SRR2857721 | seedling | drought_stress_6h | 6.93 | HC |
| SRR1944583 | seedling | no_treatment | 5.05 | HC |
| SRR358793 | seedling | wt | 16.43 | HC |
| SRR358794 | seedling | wt | 17.12 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 4.73 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 5.06 | HC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 14.33 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 10.24 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.96 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 9.93 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 11.33 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 10.30 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 13.88 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 13.95 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 20.56 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 25.25 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 12.73 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 24.15 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 32.43 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 12.08 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 17.46 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 15.23 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 4.65 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 5.65 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 4.33 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 3.55 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 6.40 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 5.86 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 5.94 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 5.56 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 11.28 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 10.12 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 5.30 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 4.92 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 3.44 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 5.09 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 5.34 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 4.74 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 6.71 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 6.57 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 11.02 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 12.28 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 37.49 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 41.38 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 41.48 | HC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 30.85 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 44.45 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 40.02 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 34.26 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 44.31 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 45.01 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 42.97 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 49.93 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 49.02 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 20.13 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 18.87 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 27.77 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 30.92 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 25.57 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 32.72 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 26.70 | HC |
| SRR1617559 | shoot_apical_meristem | no collect | 32.33 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 21.65 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 21.79 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 26.48 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 10.18 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 13.16 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 14.78 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 7.42 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 14.79 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 7.95 | HC |