| SRR358796 | callus | wt | 10.94 | HC |
| SRR358797 | callus | wt | 13.34 | HC |
| SRR358798 | callus | wt | 13.60 | HC |
| SRR5560727 | caryopsis | wild_type | 7.08 | HC |
| SRR5560728 | caryopsis | wild_type | 10.96 | HC |
| SRR5560729 | caryopsis | wild_type | 16.38 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 18.87 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 17.89 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 11.23 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 13.48 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 9.02 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 5.98 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 10.55 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 8.22 | HC |
| SRR2338867 | endosprem | control | 3.57 | HC |
| SRR2338868 | endosprem | high_temperature | 4.21 | HC |
| SRR2338869 | endosprem | high_temperature | 3.39 | HC |
| SRR976168 | flag_leaf | wild_type | 4.11 | HC |
| SRR1213690 | flower | wt(flower buds) | 15.00 | HC |
| SRR1213691 | flower | wt | 16.08 | HC |
| SRR8060835 | leaf | wild_type | 12.54 | HC |
| SRR8060836 | leaf | wild_type | 16.74 | HC |
| SRR8060837 | leaf | wild_type | 11.94 | HC |
| SRR8240818 | leaf | wild_type | 6.03 | HC |
| SRR8240819 | leaf | wild_type | 8.52 | HC |
| SRR8240820 | leaf | wild_type | 8.40 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 12.53 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 17.66 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 16.54 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 14.12 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 34.75 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 22.66 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 26.51 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 29.30 | HC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 22.07 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 17.55 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 28.66 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 21.05 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 22.58 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 42.28 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 25.90 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 25.02 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 24.35 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 24.41 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 21.91 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 20.99 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 19.08 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 18.07 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 32.64 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 22.17 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 20.53 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 58.68 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 23.01 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 24.09 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 39.19 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 19.75 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 18.59 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 36.07 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 32.03 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 25.97 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 32.38 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 22.96 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 21.70 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 47.53 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 37.55 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 34.76 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 14.14 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 13.57 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 39.03 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 40.34 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 14.14 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 13.57 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 39.04 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 40.34 | HC |
| SRR1761528 | leaf | drought | 14.14 | HC |
| SRR1761529 | leaf | drought | 13.57 | HC |
| SRR1761530 | leaf | control | 39.04 | HC |
| SRR1761531 | leaf | control | 40.34 | HC |
| SRR504365 | leaf | wt | 35.27 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 6.45 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 4.09 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 7.61 | HC |
| SRR6417967 | leaf | H2O_control | 11.44 | HC |
| SRR6417968 | leaf | H2O_control | 7.35 | HC |
| SRR6417969 | leaf | H2O_control | 7.30 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 12.18 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 11.22 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 6.18 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 6.36 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 11.48 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 13.38 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 9.51 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 6.81 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 8.74 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 7.62 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 11.20 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 7.44 | HC |
| SRR8611900 | leaf | Non-inoculated | 14.07 | HC |
| SRR8611901 | leaf | Non-inoculated | 13.57 | HC |
| SRR8611902 | leaf | Non-inoculated | 13.91 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 7.63 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 7.46 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 7.54 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 14.20 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 15.09 | HC |
| SRR1213692 | leaf | wt | 26.75 | HC |
| SRR1213693 | leaf | wt | 14.46 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 20.54 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 18.72 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 25.11 | HC |
| SRR6502088 | leaf | control | 18.23 | HC |
| SRR6502089 | leaf | control | 14.86 | HC |
| SRR6502090 | leaf | control | 15.54 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 26.54 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 26.38 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 5.45 | HC |
| SRR6502100 | leaf | control | 18.14 | HC |
| SRR6502101 | leaf | control | 14.10 | HC |
| SRR6502102 | leaf | control | 16.94 | HC |
| SRR8582888 | panicle | AM | 13.29 | HC |
| SRR8582889 | panicle | AM | 4.92 | HC |
| SRR8582890 | panicle | AM | 16.89 | HC |
| SRR8582891 | panicle | PM | 23.10 | HC |
| SRR8582892 | panicle | PM | 33.00 | HC |
| SRR8582893 | panicle | PM | 18.71 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 4.63 | HC |
| SRR5126147 | root | "mock,1_day" | 18.79 | HC |
| SRR5126148 | root | "mock,1_day" | 13.75 | HC |
| SRR5126149 | root | "mock,1_day" | 24.23 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 24.40 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 23.16 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 14.41 | HC |
| SRR5126153 | root | "mock,7_days" | 16.89 | HC |
| SRR5126155 | root | "mock,7_days" | 21.67 | HC |
| SRR5126157 | root | "mock,7_days" | 36.29 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 19.80 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 22.06 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 19.87 | HC |
| SRR5126165 | root | "mock,14_days" | 24.28 | HC |
| SRR5126167 | root | "mock,14_days" | 19.31 | HC |
| SRR5126169 | root | "mock,14_days" | 18.96 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 17.21 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 18.36 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 14.68 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 2.84 | HC |
| SRR1213694 | root | wt | 7.08 | HC |
| SRR1213695 | root | wt | 19.90 | HC |
| SRR4947481 | root | control | 7.24 | HC |
| SRR6502091 | root | 100 mM NaCl | 23.02 | HC |
| SRR6502092 | root | 100 mM NaCl | 21.35 | HC |
| SRR6502093 | root | 100 mM NaCl | 26.30 | HC |
| SRR6502094 | root | control | 12.16 | HC |
| SRR6502095 | root | control | 10.91 | HC |
| SRR6502096 | root | control | 9.57 | HC |
| SRR6502103 | root | 100 mM NaCl | 19.70 | HC |
| SRR6502104 | root | 100 mM NaCl | 23.32 | HC |
| SRR6502105 | root | 100 mM NaCl | 14.80 | HC |
| SRR6502106 | root | control | 11.58 | HC |
| SRR6502107 | root | control | 11.21 | HC |
| SRR6502108 | root | control | 11.42 | HC |
| SRR1740434 | root_differentiation_zone | wt | 4.34 | HC |
| SRR1740435 | root_differentiation_zone | wt | 3.10 | HC |
| SRR6441554 | seedling | wild_type | 15.32 | HC |
| SRR6441555 | seedling | wild_type | 13.65 | HC |
| SRR2154086 | seedling | wt | 10.44 | HC |
| SRR3098741 | seedling | wt | 23.05 | HC |
| SRR3098742 | seedling | wt | 24.13 | HC |
| SRR3098743 | seedling | wt | 12.68 | HC |
| SRR2857719 | seedling | drought_stress_0h | 23.19 | HC |
| SRR2857720 | seedling | drought_stress_1h | 16.39 | HC |
| SRR2857721 | seedling | drought_stress_6h | 5.86 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 10.11 | HC |
| SRR1944583 | seedling | no_treatment | 17.10 | HC |
| SRR358791 | seedling | wt | 24.03 | HC |
| SRR358792 | seedling | wt | 21.59 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 6.79 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 10.64 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 6.63 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 9.53 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 9.15 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 6.29 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 11.83 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 11.31 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 3.17 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 5.07 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 3.68 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 6.17 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 3.55 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 5.07 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 6.50 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 5.32 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 4.54 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 6.86 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 17.97 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 15.55 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 25.01 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 22.09 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 14.71 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 13.44 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 12.72 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 14.91 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 28.64 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 24.15 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 14.15 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 14.62 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 12.05 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 13.56 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 6.40 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 6.26 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 8.43 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 9.90 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 21.18 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 17.59 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 7.51 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 5.64 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 3.70 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 7.68 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 5.75 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 7.21 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 5.25 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 6.47 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 6.20 | HC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 11.04 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 8.06 | HC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 10.64 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 6.99 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 12.55 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 9.33 | HC |