| SRR5560727 | caryopsis | wild_type | 7.58 | HC |
| SRR5560728 | caryopsis | wild_type | 10.25 | HC |
| SRR5560729 | caryopsis | wild_type | 17.71 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 7.84 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 10.23 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 6.63 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 4.50 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 5.15 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 4.30 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 5.49 | HC |
| SRR2338867 | endosprem | control | 2.26 | HC |
| SRR2338868 | endosprem | high_temperature | 2.79 | HC |
| SRR1213690 | flower | wt(flower buds) | 8.49 | HC |
| SRR1213691 | flower | wt | 11.39 | HC |
| SRR8060835 | leaf | wild_type | 9.53 | HC |
| SRR8060836 | leaf | wild_type | 13.15 | HC |
| SRR8060837 | leaf | wild_type | 9.04 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 8.13 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 7.10 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 7.64 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 7.67 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 13.54 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 6.74 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 6.95 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 7.74 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 5.71 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 12.80 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 7.60 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 8.23 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 7.90 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 6.22 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 4.92 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 8.56 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 5.24 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 9.07 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 7.39 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 5.38 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 16.28 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 6.15 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 11.81 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 6.86 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 8.73 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 8.29 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 6.72 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 7.90 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 5.61 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 6.50 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 12.52 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 11.30 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 11.17 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 11.68 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 12.20 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 11.68 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 12.20 | HC |
| SRR1761530 | leaf | control | 11.68 | HC |
| SRR1761531 | leaf | control | 12.20 | HC |
| SRR504365 | leaf | wt | 10.66 | HC |
| SRR6417969 | leaf | H2O_control | 3.84 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 3.36 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 4.27 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 4.12 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 4.11 | HC |
| SRR8611900 | leaf | Non-inoculated | 6.55 | HC |
| SRR8611901 | leaf | Non-inoculated | 7.69 | HC |
| SRR8611902 | leaf | Non-inoculated | 6.56 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 4.15 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 7.04 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 7.26 | HC |
| SRR1213692 | leaf | wt | 9.99 | HC |
| SRR1213693 | leaf | wt | 4.19 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 11.75 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 10.45 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 5.69 | HC |
| SRR6502100 | leaf | control | 7.29 | HC |
| SRR6502101 | leaf | control | 8.30 | HC |
| SRR6502102 | leaf | control | 7.34 | HC |
| SRR8582888 | panicle | AM | 4.32 | HC |
| SRR8582889 | panicle | AM | 2.13 | HC |
| SRR8582890 | panicle | AM | 4.07 | HC |
| SRR8582891 | panicle | PM | 10.14 | HC |
| SRR8582892 | panicle | PM | 11.44 | HC |
| SRR8582893 | panicle | PM | 8.90 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 3.06 | HC |
| SRR5126147 | root | "mock,1_day" | 5.81 | HC |
| SRR5126148 | root | "mock,1_day" | 4.01 | HC |
| SRR5126149 | root | "mock,1_day" | 6.45 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 6.35 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 6.24 | HC |
| SRR5126153 | root | "mock,7_days" | 4.45 | HC |
| SRR5126157 | root | "mock,7_days" | 6.93 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 5.90 | HC |
| SRR5126165 | root | "mock,14_days" | 5.72 | HC |
| SRR5126167 | root | "mock,14_days" | 3.95 | HC |
| SRR5126169 | root | "mock,14_days" | 4.84 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 5.56 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 5.33 | HC |
| SRR1213695 | root | wt | 5.42 | HC |
| SRR1740436 | root_differentiation_zone | wt | 3.25 | HC |
| SRR1740432 | root_elongation_zone | wt | 4.01 | HC |
| SRR6441554 | seedling | wild_type | 4.80 | HC |
| SRR6441555 | seedling | wild_type | 5.04 | HC |
| SRR2154086 | seedling | wt | 7.71 | HC |
| SRR2154085 | seedling | wt | 6.81 | HC |
| SRR3098741 | seedling | wt | 5.34 | HC |
| SRR3098742 | seedling | wt | 4.75 | HC |
| SRR3098743 | seedling | wt | 4.53 | HC |
| SRR2857719 | seedling | drought_stress_0h | 5.61 | HC |
| SRR1944583 | seedling | no_treatment | 5.18 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 5.35 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 6.16 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 7.54 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.78 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 6.76 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 6.98 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 7.41 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 6.63 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 8.05 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 7.96 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 6.78 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 6.94 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 7.93 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 7.41 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 9.30 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 10.17 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 4.57 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 4.43 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 3.64 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 4.37 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 4.82 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 3.87 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 7.75 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 10.12 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 7.88 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 8.68 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 10.18 | HC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 9.30 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 6.61 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 8.17 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 7.19 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 6.12 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 5.82 | HC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 8.28 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 6.12 | HC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 7.33 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 4.57 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 7.18 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 5.17 | HC |