| SRR4457249 | 2nd_leaf | DAH4 | 44.63 | HC |
| SRR4457250 | 2nd_leaf | DAH4 | 33.97 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 38.93 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 42.37 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 40.49 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 40.36 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 58.16 | HC |
| SRR4457256 | 2nd_leaf | DAH20 | 56.56 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 58.25 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 59.84 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 58.31 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 64.33 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 49.59 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 29.45 | HC |
| SRR4457263 | 2nd_leaf | DAH36 | 44.84 | HC |
| SRR4457264 | 2nd_leaf | DAH44 | 57.39 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 70.59 | HC |
| SRR4457266 | 2nd_leaf | DAH44 | 64.28 | HC |
| SRR358795 | callus | wt | 10.34 | HC |
| SRR5560727 | caryopsis | wild_type | 71.51 | HC |
| SRR5560728 | caryopsis | wild_type | 47.42 | HC |
| SRR5560729 | caryopsis | wild_type | 37.49 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 40.85 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 40.83 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 29.23 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 46.98 | HC |
| SRR7265410 | coleoptile | 3dN | 5.84 | HC |
| SRR7265411 | coleoptile | 3dN | 5.51 | HC |
| SRR7265416 | coleoptile | 4dN | 7.04 | HC |
| SRR7265417 | coleoptile | 4dN | 9.03 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 4.77 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 5.79 | HC |
| SRR2338867 | endosprem | control | 2.27 | HC |
| SRR976168 | flag_leaf | wild_type | 12.08 | HC |
| SRR4457231 | flag_leaf | DAH4 | 37.46 | HC |
| SRR4457232 | flag_leaf | DAH4 | 36.20 | HC |
| SRR4457233 | flag_leaf | DAH4 | 37.53 | HC |
| SRR4457234 | flag_leaf | DAH12 | 28.45 | HC |
| SRR4457235 | flag_leaf | DAH12 | 30.76 | HC |
| SRR4457236 | flag_leaf | DAH12 | 28.17 | HC |
| SRR4457237 | flag_leaf | DAH20 | 33.97 | HC |
| SRR4457238 | flag_leaf | DAH20 | 36.82 | HC |
| SRR4457239 | flag_leaf | DAH20 | 43.34 | HC |
| SRR4457240 | flag_leaf | DAH28 | 47.11 | HC |
| SRR4457241 | flag_leaf | DAH28 | 42.31 | HC |
| SRR4457242 | flag_leaf | DAH28 | 44.37 | HC |
| SRR4457243 | flag_leaf | DAH36 | 35.14 | HC |
| SRR4457244 | flag_leaf | DAH36 | 29.64 | HC |
| SRR4457245 | flag_leaf | DAH36 | 29.30 | HC |
| SRR4457246 | flag_leaf | DAH44 | 63.66 | HC |
| SRR4457247 | flag_leaf | DAH44 | 57.80 | HC |
| SRR4457248 | flag_leaf | DAH44 | 56.44 | HC |
| SRR1213690 | flower | wt(flower buds) | 13.38 | HC |
| SRR1213691 | flower | wt | 16.84 | HC |
| SRR8240824 | leaf | wild_type | 114.66 | HC |
| SRR8240825 | leaf | wild_type | 112.70 | HC |
| SRR8240826 | leaf | wild_type | 83.16 | HC |
| SRR8240818 | leaf | wild_type | 77.39 | HC |
| SRR8240819 | leaf | wild_type | 100.33 | HC |
| SRR8240820 | leaf | wild_type | 117.40 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 77.24 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 79.57 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 67.03 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 52.17 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 26.52 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 27.72 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 32.22 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 18.16 | HC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 23.58 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 23.72 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 24.96 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 23.22 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 27.95 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 31.85 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 24.69 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 30.14 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 21.36 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 27.54 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 20.49 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 32.80 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 19.57 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 30.95 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 31.01 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 34.56 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 33.22 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 34.86 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 22.76 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 26.69 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 35.78 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 17.82 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 23.83 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 25.93 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 26.59 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 23.07 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 33.02 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 19.12 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 26.28 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 40.08 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 37.50 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 46.33 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 19.87 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 20.61 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 36.17 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 31.94 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 19.87 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 20.61 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 36.17 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 31.94 | HC |
| SRR1761528 | leaf | drought | 19.87 | HC |
| SRR1761529 | leaf | drought | 20.61 | HC |
| SRR1761530 | leaf | control | 36.17 | HC |
| SRR1761531 | leaf | control | 31.94 | HC |
| SRR504365 | leaf | wt | 55.73 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 12.64 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 15.77 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 24.00 | HC |
| SRR6417967 | leaf | H2O_control | 35.54 | HC |
| SRR6417968 | leaf | H2O_control | 36.00 | HC |
| SRR6417969 | leaf | H2O_control | 50.12 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 10.77 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 12.90 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 13.67 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 17.15 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 24.49 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 20.42 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 17.31 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 15.04 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 26.53 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 12.00 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 23.75 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 21.02 | HC |
| SRR8611900 | leaf | Non-inoculated | 45.37 | HC |
| SRR8611901 | leaf | Non-inoculated | 43.28 | HC |
| SRR8611902 | leaf | Non-inoculated | 42.07 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 99.25 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 97.63 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 96.09 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 28.44 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 31.31 | HC |
| SRR1213692 | leaf | wt | 38.03 | HC |
| SRR1213693 | leaf | wt | 36.34 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 42.76 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 46.88 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 53.46 | HC |
| SRR6502088 | leaf | control | 54.82 | HC |
| SRR6502089 | leaf | control | 58.99 | HC |
| SRR6502090 | leaf | control | 54.68 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 50.17 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 57.79 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 75.80 | HC |
| SRR6502100 | leaf | control | 71.03 | HC |
| SRR6502101 | leaf | control | 58.02 | HC |
| SRR6502102 | leaf | control | 59.41 | HC |
| SRR6168973 | leaf | none (control) | 104.29 | HC |
| SRR6168974 | leaf | none (control) | 94.87 | HC |
| SRR6168975 | leaf | none (control) | 87.82 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 155.95 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 4.81 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 189.06 | HC |
| SRR6168979 | leaf | none (control) | 10.04 | HC |
| SRR6168980 | leaf | none (control) | 9.93 | HC |
| SRR6168981 | leaf | none (control) | 51.85 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 36.91 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 95.47 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 56.97 | HC |
| SRR8582888 | panicle | AM | 45.16 | HC |
| SRR8582889 | panicle | AM | 64.37 | HC |
| SRR8582890 | panicle | AM | 54.60 | HC |
| SRR8582891 | panicle | PM | 89.94 | HC |
| SRR8582892 | panicle | PM | 81.09 | HC |
| SRR8582893 | panicle | PM | 179.92 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 4.78 | HC |
| SRR1633182 | panicle | WT | 30.84 | HC |
| SRR1633185 | panicle | WT | 43.05 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 12.00 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 12.28 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 23.85 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 23.35 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 21.85 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 26.68 | HC |
| SRR5126155 | root | "mock,7_days" | 6.40 | HC |
| SRR5126157 | root | "mock,7_days" | 14.86 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 8.74 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 7.09 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 6.70 | HC |
| SRR5126167 | root | "mock,14_days" | 3.92 | HC |
| SRR5126169 | root | "mock,14_days" | 11.29 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 9.32 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 15.96 | HC |
| SRR1213695 | root | wt | 40.54 | HC |
| SRR1740434 | root_differentiation_zone | wt | 4.24 | HC |
| SRR6441554 | seedling | wild_type | 46.53 | HC |
| SRR6441555 | seedling | wild_type | 47.86 | HC |
| SRR2154086 | seedling | wt | 62.63 | HC |
| SRR2154085 | seedling | wt | 59.90 | HC |
| SRR2154087 | seedling | wt | 62.12 | HC |
| SRR3098741 | seedling | wt | 65.37 | HC |
| SRR3098742 | seedling | wt | 74.72 | HC |
| SRR3098743 | seedling | wt | 42.96 | HC |
| SRR2857719 | seedling | drought_stress_0h | 35.46 | HC |
| SRR2857720 | seedling | drought_stress_1h | 37.49 | HC |
| SRR2857721 | seedling | drought_stress_6h | 23.50 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 42.37 | HC |
| SRR1944583 | seedling | no_treatment | 42.11 | HC |
| SRR358791 | seedling | wt | 50.84 | HC |
| SRR358792 | seedling | wt | 49.62 | HC |
| SRR358793 | seedling | wt | 47.19 | HC |
| SRR358794 | seedling | wt | 47.71 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 20.71 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 25.65 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 16.57 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 18.85 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 21.84 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 16.76 | HC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 17.78 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 19.03 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 27.18 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 30.71 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 14.70 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 14.71 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 17.93 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 25.22 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 39.40 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 48.62 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 61.39 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 96.91 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 94.85 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 58.72 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 90.70 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 76.27 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 34.01 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 39.67 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 37.00 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 41.06 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 41.74 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 41.00 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 43.60 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 39.31 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 69.61 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 73.90 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 38.46 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 33.96 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 39.47 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 38.52 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 23.97 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 21.52 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 46.38 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 45.17 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 83.58 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 75.93 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 9.55 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 12.88 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 10.02 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 12.26 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 12.60 | HC |
| SRR1617559 | shoot_apical_meristem | no collect | 14.26 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 20.32 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 19.39 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 23.46 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 9.13 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 9.34 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 8.53 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 11.48 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 11.73 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 10.23 | HC |