| SRR3745125 | anther | wt | 11.41 | HC |
| SRR3745126 | anther | wt | 12.69 | HC |
| SRR3745127 | anther | wt | 11.03 | HC |
| SRR5560727 | caryopsis | wild_type | 16.87 | HC |
| SRR5560728 | caryopsis | wild_type | 15.80 | HC |
| SRR5560729 | caryopsis | wild_type | 18.58 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 8.70 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 7.88 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 4.27 | HC |
| SRR4947495 | root | control | 8.78 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 6.27 | HC |
| SRR7265400 | coleoptile | 2dA | 8.59 | HC |
| SRR7265401 | coleoptile | 2dA | 7.63 | HC |
| SRR7265402 | coleoptile | 2dA | 7.63 | HC |
| SRR7265403 | coleoptile | 2dN | 10.57 | HC |
| SRR7265404 | coleoptile | 2dN | 9.78 | HC |
| SRR7265405 | coleoptile | 2dN | 8.48 | HC |
| SRR7265406 | coleoptile | 3dA | 4.95 | HC |
| SRR7265407 | coleoptile | 3dA | 5.22 | HC |
| SRR7265408 | coleoptile | 3dA | 3.97 | HC |
| SRR7265409 | coleoptile | 3dN | 7.97 | HC |
| SRR7265410 | coleoptile | 3dN | 6.42 | HC |
| SRR7265411 | coleoptile | 3dN | 6.67 | HC |
| SRR7265412 | coleoptile | 4dA | 4.67 | HC |
| SRR7265413 | coleoptile | 4dA | 8.09 | HC |
| SRR7265414 | coleoptile | 4dA | 4.59 | HC |
| SRR7265415 | coleoptile | 4dN | 6.99 | HC |
| SRR7265416 | coleoptile | 4dN | 6.11 | HC |
| SRR7265417 | coleoptile | 4dN | 6.26 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 5.18 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 4.58 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 4.98 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 6.42 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 9.52 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 4.87 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 6.95 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 12.22 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 10.08 | HC |
| SRR7265373 | embryo | dry seed 0 h | 7.44 | HC |
| SRR7265374 | embryo | dry seed 0 h | 7.69 | HC |
| SRR7265375 | embryo | dry seed 0 h | 2.31 | HC |
| SRR7265376 | embryo | 1hA | 5.34 | HC |
| SRR7265377 | embryo | 1hA | 8.90 | HC |
| SRR7265378 | embryo | 1hA | 6.72 | HC |
| SRR7265379 | embryo | 1hN | 6.36 | HC |
| SRR7265380 | embryo | 1hN | 6.09 | HC |
| SRR7265381 | embryo | 1hN | 6.85 | HC |
| SRR7265382 | embryo | 3hA | 11.15 | HC |
| SRR7265383 | embryo | 3hA | 9.55 | HC |
| SRR7265384 | embryo | 3hA | 8.92 | HC |
| SRR7265385 | embryo | 3hN | 7.86 | HC |
| SRR7265386 | embryo | 3hN | 7.07 | HC |
| SRR7265387 | embryo | 3hN | 5.84 | HC |
| SRR7265388 | embryo | 12hA | 11.39 | HC |
| SRR7265389 | embryo | 12hA | 11.05 | HC |
| SRR7265390 | embryo | 12hA | 11.47 | HC |
| SRR7265391 | embryo | 12hN | 12.32 | HC |
| SRR7265392 | embryo | 12hN | 10.18 | HC |
| SRR7265393 | embryo | 12hN | 10.30 | HC |
| SRR7265394 | embryo | 24hA | 8.72 | HC |
| SRR7265395 | embryo | 24hA | 11.71 | HC |
| SRR7265396 | embryo | 24hA | 9.91 | HC |
| SRR7265397 | embryo | 24hN | 10.91 | HC |
| SRR7265398 | embryo | 24hN | 10.76 | HC |
| SRR7265399 | embryo | 24hN | 10.07 | HC |
| SRR2338867 | endosprem | control | 3.29 | HC |
| SRR2338869 | endosprem | high_temperature | 5.17 | HC |
| SRR976168 | flag_leaf | wild_type | 5.48 | HC |
| SRR4457243 | flag_leaf | DAH36 | 4.13 | HC |
| SRR1213690 | flower | wt(flower buds) | 7.16 | HC |
| SRR1213691 | flower | wt | 10.68 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 8.24 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 6.26 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 4.48 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 4.62 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 6.27 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 5.64 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 7.72 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 6.42 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 5.99 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 4.49 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 5.45 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 5.85 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 5.63 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.71 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 6.31 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 5.96 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 5.66 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 7.44 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 5.23 | HC |
| SRR8611900 | leaf | Non-inoculated | 6.22 | HC |
| SRR8611901 | leaf | Non-inoculated | 5.29 | HC |
| SRR8611902 | leaf | Non-inoculated | 6.89 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 4.57 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 4.92 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 4.88 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 8.54 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 9.36 | HC |
| SRR1213693 | leaf | wt | 4.83 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 4.87 | HC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 9.14 | HC |
| SRR6053396 | leaf | gibberellic acid (GA) | 8.07 | HC |
| SRR6168973 | leaf | none (control) | 10.73 | HC |
| SRR6168974 | leaf | none (control) | 10.04 | HC |
| SRR6168975 | leaf | none (control) | 6.80 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 19.11 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 16.95 | HC |
| SRR6168981 | leaf | none (control) | 4.06 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 3.13 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 5.25 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 4.57 | HC |
| SRR8582889 | panicle | AM | 2.44 | HC |
| SRR8582893 | panicle | PM | 7.75 | HC |
| SRR4947496 | root | control | 5.51 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 2.73 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 2.42 | HC |
| SRR1633182 | panicle | WT | 6.59 | HC |
| SRR1633185 | panicle | WT | 7.73 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 4.17 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 3.53 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 7.27 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 5.89 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 14.17 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 15.24 | HC |
| SRR5126147 | root | "mock,1_day" | 6.54 | HC |
| SRR5126148 | root | "mock,1_day" | 6.80 | HC |
| SRR5126149 | root | "mock,1_day" | 7.19 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 7.20 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 8.05 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 5.28 | HC |
| SRR5126153 | root | "mock,7_days" | 6.42 | HC |
| SRR5126155 | root | "mock,7_days" | 6.37 | HC |
| SRR5126157 | root | "mock,7_days" | 8.23 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 6.50 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 6.80 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 9.97 | HC |
| SRR5126165 | root | "mock,14_days" | 5.84 | HC |
| SRR5126167 | root | "mock,14_days" | 4.87 | HC |
| SRR5126169 | root | "mock,14_days" | 7.58 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 6.69 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 6.90 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 11.26 | HC |
| SRR1213695 | root | wt | 5.76 | HC |
| SRR4947478 | root | control | 8.63 | HC |
| SRR4947479 | root | control | 8.28 | HC |
| SRR4947480 | root | control | 6.74 | HC |
| SRR4947481 | root | control | 11.37 | HC |
| SRR4947482 | root | Al | 7.36 | HC |
| SRR4947483 | root | Al | 6.02 | HC |
| SRR4947484 | root | Al | 7.14 | HC |
| SRR4947485 | root | Al | 6.90 | HC |
| SRR4947487 | root | control | 7.64 | HC |
| SRR4947488 | root | control | 6.51 | HC |
| SRR4947489 | root | control | 5.96 | HC |
| SRR4947490 | root | Al | 7.30 | HC |
| SRR4947491 | root | Al | 10.34 | HC |
| SRR4947492 | root | Al | 6.98 | HC |
| SRR4947493 | root | Al | 8.98 | HC |
| SRR4947494 | root | control | 6.70 | HC |
| SRR4947497 | root | control | 15.27 | HC |
| SRR4947498 | root | Al | 10.83 | HC |
| SRR4947499 | root | Al | 10.48 | HC |
| SRR4947500 | root | Al | 12.26 | HC |
| SRR4947501 | root | Al | 17.15 | HC |
| SRR4947502 | root | control | 9.79 | HC |
| SRR4947503 | root | control | 9.77 | HC |
| SRR4947504 | root | control | 9.44 | HC |
| SRR4947505 | root | control | 13.30 | HC |
| SRR4947506 | root | Al | 6.05 | HC |
| SRR4947507 | root | Al | 14.69 | HC |
| SRR4947508 | root | Al | 6.72 | HC |
| SRR4947509 | root | Al | 8.52 | HC |
| SRR6502095 | root | control | 5.03 | HC |
| SRR6502104 | root | 100 mM NaCl | 5.60 | HC |
| SRR6502105 | root | 100 mM NaCl | 6.74 | HC |
| SRR6502107 | root | control | 4.20 | HC |
| SRR1740436 | root_differentiation_zone | wt | 3.32 | HC |
| SRR1740432 | root_elongation_zone | wt | 7.26 | HC |
| SRR1740433 | root_elongation_zone | wt | 6.32 | HC |
| SRR1740429 | root_meristematic_zone | wt | 6.92 | HC |
| SRR1740430 | root_meristematic_zone | wt | 10.85 | HC |
| SRR6441555 | seedling | wild_type | 3.68 | HC |
| SRR2154086 | seedling | wt | 9.70 | HC |
| SRR2154085 | seedling | wt | 8.49 | HC |
| SRR2154087 | seedling | wt | 13.05 | HC |
| SRR3098741 | seedling | wt | 4.08 | HC |
| SRR3098742 | seedling | wt | 3.87 | HC |
| SRR3098743 | seedling | wt | 3.06 | HC |
| SRR2857719 | seedling | drought_stress_0h | 6.23 | HC |
| SRR2857720 | seedling | drought_stress_1h | 6.08 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 8.08 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 3.32 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 4.92 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 4.49 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 3.19 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 3.02 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 4.04 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 5.27 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 4.49 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 4.53 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 17.45 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 17.40 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 17.07 | HC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 23.65 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 17.82 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 22.33 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 22.42 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 16.37 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 19.22 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 18.45 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 14.15 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 23.29 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 30.48 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 32.77 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 28.99 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 22.93 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 35.46 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 25.68 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 34.18 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 31.99 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 33.31 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 23.65 | HC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 28.17 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 24.69 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 15.80 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 18.65 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 17.41 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 13.89 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 16.57 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 12.02 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 12.35 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 7.51 | HC |