| SRR358797 | callus | wt | 15.67 | HC |
| SRR358798 | callus | wt | 12.07 | HC |
| SRR5560728 | caryopsis | wild_type | 6.44 | HC |
| SRR5560729 | caryopsis | wild_type | 8.19 | HC |
| SRR7265403 | coleoptile | 2dN | 5.69 | HC |
| SRR7265404 | coleoptile | 2dN | 4.90 | HC |
| SRR7265405 | coleoptile | 2dN | 4.39 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 4.95 | HC |
| SRR7265388 | embryo | 12hA | 9.12 | HC |
| SRR7265389 | embryo | 12hA | 9.98 | HC |
| SRR7265390 | embryo | 12hA | 10.55 | HC |
| SRR7265391 | embryo | 12hN | 10.41 | HC |
| SRR7265392 | embryo | 12hN | 8.92 | HC |
| SRR7265393 | embryo | 12hN | 8.87 | HC |
| SRR7265395 | embryo | 24hA | 6.46 | HC |
| SRR7265396 | embryo | 24hA | 5.97 | HC |
| SRR7265397 | embryo | 24hN | 6.69 | HC |
| SRR7265398 | embryo | 24hN | 6.79 | HC |
| SRR7265399 | embryo | 24hN | 6.40 | HC |
| SRR1213690 | flower | wt(flower buds) | 6.60 | HC |
| SRR1213691 | flower | wt | 7.96 | HC |
| SRR8060837 | leaf | wild_type | 2.91 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 7.85 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 4.05 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 5.03 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 7.95 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 7.69 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 7.40 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 7.11 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 7.05 | HC |
| SRR504365 | leaf | wt | 5.00 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 4.93 | HC |
| SRR1213692 | leaf | wt | 4.65 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 5.10 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 4.96 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 7.43 | HC |
| SRR8582890 | panicle | AM | 3.28 | HC |
| SRR8582891 | panicle | PM | 11.74 | HC |
| SRR8582892 | panicle | PM | 15.99 | HC |
| SRR8582893 | panicle | PM | 8.50 | HC |
| SRR1633182 | panicle | WT | 5.54 | HC |
| SRR1633185 | panicle | WT | 7.16 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 10.94 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 8.26 | HC |
| SRR5126148 | root | "mock,1_day" | 4.84 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 6.93 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 5.20 | HC |
| SRR5126153 | root | "mock,7_days" | 4.63 | HC |
| SRR5126155 | root | "mock,7_days" | 5.01 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 8.35 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 6.67 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 9.08 | HC |
| SRR5126169 | root | "mock,14_days" | 5.26 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 7.59 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 7.92 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 6.56 | HC |
| SRR1213695 | root | wt | 3.38 | HC |
| SRR4947481 | root | control | 6.19 | HC |
| SRR4947484 | root | Al | 5.41 | HC |
| SRR4947497 | root | control | 6.31 | HC |
| SRR4947500 | root | Al | 6.49 | HC |
| SRR4947504 | root | control | 5.73 | HC |
| SRR6502091 | root | 100 mM NaCl | 6.28 | HC |
| SRR6502107 | root | control | 4.29 | HC |
| SRR1740432 | root_elongation_zone | wt | 3.71 | HC |
| SRR1740429 | root_meristematic_zone | wt | 5.70 | HC |
| SRR1740430 | root_meristematic_zone | wt | 6.49 | HC |
| SRR2154086 | seedling | wt | 6.20 | HC |
| SRR2154085 | seedling | wt | 6.33 | HC |
| SRR2857719 | seedling | drought_stress_0h | 5.42 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 3.84 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 4.28 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 5.00 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 4.19 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 13.40 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 13.50 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 12.32 | HC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 11.60 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 18.98 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 14.14 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 15.94 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 12.30 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 12.86 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 10.06 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 11.65 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 12.33 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 15.84 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 14.18 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 15.71 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 11.54 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 13.06 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 15.23 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 13.19 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 17.80 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 14.39 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 14.15 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 3.84 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 4.96 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 5.03 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 5.02 | HC |