| SRR4457258 | 2nd_leaf | DAH28 | 4.47 | HC |
| SRR4457266 | 2nd_leaf | DAH44 | 9.50 | HC |
| SRR3745125 | anther | wt | 8.95 | HC |
| SRR3745126 | anther | wt | 7.72 | HC |
| SRR5560727 | caryopsis | wild_type | 6.65 | HC |
| SRR5560728 | caryopsis | wild_type | 9.09 | HC |
| SRR5560729 | caryopsis | wild_type | 9.29 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 8.05 | HC |
| SRR4947495 | root | control | 6.60 | HC |
| SRR7265400 | coleoptile | 2dA | 8.79 | HC |
| SRR7265401 | coleoptile | 2dA | 7.66 | HC |
| SRR7265402 | coleoptile | 2dA | 8.00 | HC |
| SRR7265403 | coleoptile | 2dN | 8.65 | HC |
| SRR7265404 | coleoptile | 2dN | 11.23 | HC |
| SRR7265405 | coleoptile | 2dN | 8.82 | HC |
| SRR7265406 | coleoptile | 3dA | 4.04 | HC |
| SRR7265407 | coleoptile | 3dA | 4.56 | HC |
| SRR7265409 | coleoptile | 3dN | 5.01 | HC |
| SRR7265410 | coleoptile | 3dN | 5.13 | HC |
| SRR7265411 | coleoptile | 3dN | 4.59 | HC |
| SRR7265412 | coleoptile | 4dA | 4.00 | HC |
| SRR7265413 | coleoptile | 4dA | 5.31 | HC |
| SRR7265415 | coleoptile | 4dN | 6.24 | HC |
| SRR7265416 | coleoptile | 4dN | 7.45 | HC |
| SRR7265417 | coleoptile | 4dN | 7.06 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 4.75 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 4.63 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 4.55 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 5.39 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 7.39 | HC |
| SRR7265373 | embryo | dry seed 0 h | 4.56 | HC |
| SRR7265374 | embryo | dry seed 0 h | 5.54 | HC |
| SRR7265376 | embryo | 1hA | 6.06 | HC |
| SRR7265377 | embryo | 1hA | 5.21 | HC |
| SRR7265378 | embryo | 1hA | 5.81 | HC |
| SRR7265379 | embryo | 1hN | 5.18 | HC |
| SRR7265380 | embryo | 1hN | 5.67 | HC |
| SRR7265381 | embryo | 1hN | 7.22 | HC |
| SRR7265382 | embryo | 3hA | 5.30 | HC |
| SRR7265383 | embryo | 3hA | 6.76 | HC |
| SRR7265384 | embryo | 3hA | 6.70 | HC |
| SRR7265385 | embryo | 3hN | 7.00 | HC |
| SRR7265386 | embryo | 3hN | 6.78 | HC |
| SRR7265387 | embryo | 3hN | 6.83 | HC |
| SRR7265388 | embryo | 12hA | 21.13 | HC |
| SRR7265389 | embryo | 12hA | 20.75 | HC |
| SRR7265390 | embryo | 12hA | 26.29 | HC |
| SRR7265391 | embryo | 12hN | 17.41 | HC |
| SRR7265392 | embryo | 12hN | 20.34 | HC |
| SRR7265393 | embryo | 12hN | 21.33 | HC |
| SRR7265394 | embryo | 24hA | 15.51 | HC |
| SRR7265395 | embryo | 24hA | 17.07 | HC |
| SRR7265396 | embryo | 24hA | 13.93 | HC |
| SRR7265397 | embryo | 24hN | 12.89 | HC |
| SRR7265398 | embryo | 24hN | 12.02 | HC |
| SRR7265399 | embryo | 24hN | 12.27 | HC |
| SRR4457237 | flag_leaf | DAH20 | 3.17 | HC |
| SRR4457241 | flag_leaf | DAH28 | 4.48 | HC |
| SRR4457242 | flag_leaf | DAH28 | 4.08 | HC |
| SRR4457246 | flag_leaf | DAH44 | 7.25 | HC |
| SRR1213690 | flower | wt(flower buds) | 12.77 | HC |
| SRR1213691 | flower | wt | 12.25 | HC |
| SRR8060835 | leaf | wild_type | 4.24 | HC |
| SRR8060836 | leaf | wild_type | 6.61 | HC |
| SRR8060837 | leaf | wild_type | 3.35 | HC |
| SRR8240820 | leaf | wild_type | 3.41 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 6.75 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 6.41 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 4.21 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 4.59 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 3.56 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 5.55 | HC |
| SRR504365 | leaf | wt | 4.98 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 4.63 | HC |
| SRR6417969 | leaf | H2O_control | 4.11 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 5.48 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 5.86 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 5.65 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 6.42 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 7.45 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 5.20 | HC |
| SRR8611901 | leaf | Non-inoculated | 3.89 | HC |
| SRR8611902 | leaf | Non-inoculated | 3.94 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 5.66 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 7.07 | HC |
| SRR1213693 | leaf | wt | 5.07 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 6.51 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 5.25 | HC |
| SRR6502088 | leaf | control | 4.57 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 2.88 | HC |
| SRR8582891 | panicle | PM | 6.23 | HC |
| SRR8582892 | panicle | PM | 9.99 | HC |
| SRR8582893 | panicle | PM | 6.78 | HC |
| SRR5110429 | panicle | Dawn | 8.33 | HC |
| SRR5110430 | panicle | Dawn | 6.40 | HC |
| SRR5110431 | panicle | Dawn | 7.53 | HC |
| SRR5110432 | panicle | Dawn | 4.20 | HC |
| SRR5110437 | panicle | Dawn + 7h | 6.19 | HC |
| SRR5110438 | panicle | Dawn + 7h | 5.39 | HC |
| SRR5110441 | panicle | Dawn + 10.5h | 5.70 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 4.73 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 5.23 | HC |
| SRR5110445 | panicle | Dusk | 5.54 | HC |
| SRR5110446 | panicle | Dusk | 7.26 | HC |
| SRR5110447 | panicle | Dusk | 7.76 | HC |
| SRR5110448 | panicle | Dusk | 6.88 | HC |
| SRR5110450 | panicle | Dawn + 14h | 6.75 | HC |
| SRR5110451 | panicle | Dawn + 14h | 7.93 | HC |
| SRR5110452 | panicle | Dawn + 14h | 7.93 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 5.03 | HC |
| SRR5110454 | panicle | Dawn + 17.5h | 3.71 | HC |
| SRR5110455 | panicle | Dawn + 17.5h | 4.82 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 8.84 | HC |
| SRR5110457 | panicle | Dawn + 21h | 5.34 | HC |
| SRR5110459 | panicle | Dawn + 21h | 4.52 | HC |
| SRR5110460 | panicle | Dawn + 21h | 5.84 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 3.39 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 5.37 | HC |
| SRR1633182 | panicle | WT | 11.15 | HC |
| SRR1633185 | panicle | WT | 16.54 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 9.84 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 10.37 | HC |
| SRR5126147 | root | "mock,1_day" | 10.52 | HC |
| SRR5126148 | root | "mock,1_day" | 10.36 | HC |
| SRR5126149 | root | "mock,1_day" | 7.83 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 8.38 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 7.77 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 13.28 | HC |
| SRR5126153 | root | "mock,7_days" | 7.88 | HC |
| SRR5126155 | root | "mock,7_days" | 7.17 | HC |
| SRR5126157 | root | "mock,7_days" | 7.39 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 10.90 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 8.59 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 8.22 | HC |
| SRR5126165 | root | "mock,14_days" | 5.83 | HC |
| SRR5126167 | root | "mock,14_days" | 6.24 | HC |
| SRR5126169 | root | "mock,14_days" | 8.54 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 6.03 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 6.40 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 7.28 | HC |
| SRR1213695 | root | wt | 4.81 | HC |
| SRR4947479 | root | control | 5.86 | HC |
| SRR4947482 | root | Al | 3.81 | HC |
| SRR4947483 | root | Al | 4.10 | HC |
| SRR4947487 | root | control | 6.20 | HC |
| SRR4947491 | root | Al | 6.48 | HC |
| SRR4947499 | root | Al | 6.66 | HC |
| SRR4947501 | root | Al | 6.33 | HC |
| SRR4947507 | root | Al | 6.72 | HC |
| SRR6502091 | root | 100 mM NaCl | 8.60 | HC |
| SRR6502092 | root | 100 mM NaCl | 9.02 | HC |
| SRR6502093 | root | 100 mM NaCl | 10.23 | HC |
| SRR6502095 | root | control | 5.50 | HC |
| SRR6502096 | root | control | 7.80 | HC |
| SRR6502103 | root | 100 mM NaCl | 8.50 | HC |
| SRR6502104 | root | 100 mM NaCl | 7.03 | HC |
| SRR6502105 | root | 100 mM NaCl | 9.23 | HC |
| SRR6502106 | root | control | 6.57 | HC |
| SRR6502107 | root | control | 5.42 | HC |
| SRR6502108 | root | control | 7.63 | HC |
| SRR1740434 | root_differentiation_zone | wt | 10.08 | HC |
| SRR1740435 | root_differentiation_zone | wt | 4.90 | HC |
| SRR1740436 | root_differentiation_zone | wt | 5.95 | HC |
| SRR1740431 | root_elongation_zone | wt | 12.56 | HC |
| SRR1740432 | root_elongation_zone | wt | 12.14 | HC |
| SRR1740433 | root_elongation_zone | wt | 11.69 | HC |
| SRR1740428 | root_meristematic_zone | wt | 17.01 | HC |
| SRR1740429 | root_meristematic_zone | wt | 21.86 | HC |
| SRR1740430 | root_meristematic_zone | wt | 24.73 | HC |
| SRR2154086 | seedling | wt | 8.84 | HC |
| SRR2154085 | seedling | wt | 4.67 | HC |
| SRR2154087 | seedling | wt | 6.66 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 4.81 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 7.92 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 12.68 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 7.75 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 3.70 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 3.59 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 3.71 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 4.36 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 3.39 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 3.96 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 3.85 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 12.37 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 14.74 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 12.76 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 12.23 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 13.73 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 12.87 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 16.16 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 10.67 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 15.82 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 14.77 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 11.68 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 12.13 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 11.72 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 12.15 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 13.77 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 13.66 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 16.84 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 14.40 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 14.35 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 12.27 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 7.77 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 4.50 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 6.24 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 5.37 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 5.54 | HC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 17.17 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 14.62 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 7.83 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 7.34 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 11.17 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 10.11 | HC |