| SRR4457250 | 2nd_leaf | DAH4 | 4.94 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 5.72 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 6.53 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 6.49 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 5.36 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 6.54 | HC |
| SRR4457256 | 2nd_leaf | DAH20 | 5.96 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 5.72 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 5.46 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 5.38 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 5.13 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 5.25 | HC |
| SRR3745125 | anther | wt | 10.45 | HC |
| SRR3745126 | anther | wt | 8.78 | HC |
| SRR3745127 | anther | wt | 9.23 | HC |
| SRR5560727 | caryopsis | wild_type | 9.80 | HC |
| SRR5560728 | caryopsis | wild_type | 8.28 | HC |
| SRR5560729 | caryopsis | wild_type | 9.19 | HC |
| SRR4947495 | root | control | 5.90 | HC |
| SRR7265401 | coleoptile | 2dA | 3.76 | HC |
| SRR7265402 | coleoptile | 2dA | 3.78 | HC |
| SRR7265403 | coleoptile | 2dN | 6.02 | HC |
| SRR7265404 | coleoptile | 2dN | 7.01 | HC |
| SRR7265405 | coleoptile | 2dN | 5.40 | HC |
| SRR7265410 | coleoptile | 3dN | 4.03 | HC |
| SRR7265411 | coleoptile | 3dN | 3.99 | HC |
| SRR7265415 | coleoptile | 4dN | 6.30 | HC |
| SRR7265416 | coleoptile | 4dN | 4.72 | HC |
| SRR7265373 | embryo | dry seed 0 h | 7.22 | HC |
| SRR7265374 | embryo | dry seed 0 h | 8.30 | HC |
| SRR7265375 | embryo | dry seed 0 h | 2.33 | HC |
| SRR7265376 | embryo | 1hA | 5.51 | HC |
| SRR7265377 | embryo | 1hA | 6.94 | HC |
| SRR7265378 | embryo | 1hA | 6.25 | HC |
| SRR7265379 | embryo | 1hN | 7.36 | HC |
| SRR7265380 | embryo | 1hN | 6.97 | HC |
| SRR7265381 | embryo | 1hN | 5.95 | HC |
| SRR7265382 | embryo | 3hA | 6.15 | HC |
| SRR7265383 | embryo | 3hA | 5.62 | HC |
| SRR7265384 | embryo | 3hA | 5.83 | HC |
| SRR7265385 | embryo | 3hN | 6.80 | HC |
| SRR7265386 | embryo | 3hN | 6.84 | HC |
| SRR7265387 | embryo | 3hN | 6.06 | HC |
| SRR7265388 | embryo | 12hA | 7.23 | HC |
| SRR7265389 | embryo | 12hA | 8.69 | HC |
| SRR7265390 | embryo | 12hA | 8.18 | HC |
| SRR7265391 | embryo | 12hN | 9.10 | HC |
| SRR7265392 | embryo | 12hN | 10.29 | HC |
| SRR7265393 | embryo | 12hN | 10.87 | HC |
| SRR7265395 | embryo | 24hA | 6.78 | HC |
| SRR7265396 | embryo | 24hA | 5.67 | HC |
| SRR7265397 | embryo | 24hN | 9.19 | HC |
| SRR7265398 | embryo | 24hN | 7.76 | HC |
| SRR7265399 | embryo | 24hN | 7.98 | HC |
| SRR4457231 | flag_leaf | DAH4 | 4.34 | HC |
| SRR4457232 | flag_leaf | DAH4 | 4.84 | HC |
| SRR4457233 | flag_leaf | DAH4 | 5.14 | HC |
| SRR4457234 | flag_leaf | DAH12 | 4.57 | HC |
| SRR4457235 | flag_leaf | DAH12 | 5.70 | HC |
| SRR4457236 | flag_leaf | DAH12 | 5.60 | HC |
| SRR4457237 | flag_leaf | DAH20 | 6.60 | HC |
| SRR4457238 | flag_leaf | DAH20 | 6.01 | HC |
| SRR4457239 | flag_leaf | DAH20 | 5.79 | HC |
| SRR4457241 | flag_leaf | DAH28 | 5.10 | HC |
| SRR4457242 | flag_leaf | DAH28 | 4.96 | HC |
| SRR4457243 | flag_leaf | DAH36 | 5.56 | HC |
| SRR4457244 | flag_leaf | DAH36 | 4.07 | HC |
| SRR4457245 | flag_leaf | DAH36 | 4.00 | HC |
| SRR4457246 | flag_leaf | DAH44 | 5.17 | HC |
| SRR4457248 | flag_leaf | DAH44 | 7.79 | HC |
| SRR1213690 | flower | wt(flower buds) | 5.89 | HC |
| SRR1213691 | flower | wt | 5.79 | HC |
| SRR8060835 | leaf | wild_type | 5.80 | HC |
| SRR8060836 | leaf | wild_type | 6.78 | HC |
| SRR8060837 | leaf | wild_type | 5.71 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.76 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 4.08 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 4.79 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 5.05 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 5.86 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 3.83 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 5.05 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 8.74 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 6.04 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 8.74 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 6.04 | HC |
| SRR1761529 | leaf | drought | 8.74 | HC |
| SRR1761530 | leaf | control | 6.04 | HC |
| SRR504365 | leaf | wt | 7.99 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 3.54 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 4.53 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 4.70 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 3.78 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 4.41 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 4.81 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 4.47 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 6.13 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 4.24 | HC |
| SRR8611900 | leaf | Non-inoculated | 4.75 | HC |
| SRR8611901 | leaf | Non-inoculated | 4.78 | HC |
| SRR8611902 | leaf | Non-inoculated | 4.53 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 3.89 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 4.93 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 4.15 | HC |
| SRR1213692 | leaf | wt | 5.06 | HC |
| SRR1213693 | leaf | wt | 5.52 | HC |
| SRR6168973 | leaf | none (control) | 5.72 | HC |
| SRR6168974 | leaf | none (control) | 8.89 | HC |
| SRR6168975 | leaf | none (control) | 7.21 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 11.35 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 10.44 | HC |
| SRR6168979 | leaf | none (control) | 2.42 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 3.49 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 2.71 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 3.23 | HC |
| SRR8582891 | panicle | PM | 8.08 | HC |
| SRR8582892 | panicle | PM | 9.08 | HC |
| SRR8582893 | panicle | PM | 6.18 | HC |
| SRR5110429 | panicle | Dawn | 5.77 | HC |
| SRR5110430 | panicle | Dawn | 8.72 | HC |
| SRR5110431 | panicle | Dawn | 6.56 | HC |
| SRR5110436 | panicle | Dawn + 3.5h | 4.88 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 4.08 | HC |
| SRR5110446 | panicle | Dusk | 5.77 | HC |
| SRR5110447 | panicle | Dusk | 4.63 | HC |
| SRR5110449 | panicle | Dawn + 14h | 8.18 | HC |
| SRR5110451 | panicle | Dawn + 14h | 5.58 | HC |
| SRR5110452 | panicle | Dawn + 14h | 6.53 | HC |
| SRR5110454 | panicle | Dawn + 17.5h | 3.81 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 5.57 | HC |
| SRR5110460 | panicle | Dawn + 21h | 5.64 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 4.55 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 7.60 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 7.18 | HC |
| SRR5126148 | root | "mock,1_day" | 3.86 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 6.14 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 7.21 | HC |
| SRR5126153 | root | "mock,7_days" | 4.83 | HC |
| SRR5126155 | root | "mock,7_days" | 5.90 | HC |
| SRR5126157 | root | "mock,7_days" | 7.07 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 6.83 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 6.67 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 7.38 | HC |
| SRR5126165 | root | "mock,14_days" | 6.73 | HC |
| SRR5126167 | root | "mock,14_days" | 4.67 | HC |
| SRR5126169 | root | "mock,14_days" | 6.91 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 8.27 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 7.00 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 10.05 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 4.61 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 3.60 | HC |
| SRR1213695 | root | wt | 9.38 | HC |
| SRR4947482 | root | Al | 4.23 | HC |
| SRR4947485 | root | Al | 5.11 | HC |
| SRR4947499 | root | Al | 5.05 | HC |
| SRR4947502 | root | control | 6.88 | HC |
| SRR4947507 | root | Al | 7.54 | HC |
| SRR6502091 | root | 100 mM NaCl | 6.41 | HC |
| SRR6502092 | root | 100 mM NaCl | 5.56 | HC |
| SRR6502104 | root | 100 mM NaCl | 5.35 | HC |
| SRR6502105 | root | 100 mM NaCl | 4.82 | HC |
| SRR1740436 | root_differentiation_zone | wt | 3.46 | HC |
| SRR1740431 | root_elongation_zone | wt | 4.46 | HC |
| SRR1740432 | root_elongation_zone | wt | 5.15 | HC |
| SRR1740433 | root_elongation_zone | wt | 5.67 | HC |
| SRR1740429 | root_meristematic_zone | wt | 4.20 | HC |
| SRR1740430 | root_meristematic_zone | wt | 6.12 | HC |
| SRR2154086 | seedling | wt | 7.52 | HC |
| SRR2154085 | seedling | wt | 6.32 | HC |
| SRR3098741 | seedling | wt | 3.41 | HC |
| SRR3098742 | seedling | wt | 3.04 | HC |
| SRR2857720 | seedling | drought_stress_1h | 4.45 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 6.11 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 6.38 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.11 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 3.57 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 3.71 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 3.10 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.73 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 9.31 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 9.80 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 9.28 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 13.87 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 10.86 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 9.46 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 8.50 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 8.40 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 10.30 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 11.25 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 11.69 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 9.73 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 11.27 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 8.89 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 10.67 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 10.78 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 10.12 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 9.21 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 4.05 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 4.14 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 4.90 | HC |