| SRR5560727 | caryopsis | wild_type | 13.45 | HC |
| SRR5560728 | caryopsis | wild_type | 10.90 | HC |
| SRR5560729 | caryopsis | wild_type | 7.93 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 8.42 | HC |
| SRR7265384 | embryo | 3hA | 4.36 | HC |
| SRR8060835 | leaf | wild_type | 11.52 | HC |
| SRR8060836 | leaf | wild_type | 9.89 | HC |
| SRR8060837 | leaf | wild_type | 11.95 | HC |
| SRR8240824 | leaf | wild_type | 6.13 | HC |
| SRR8240825 | leaf | wild_type | 5.31 | HC |
| SRR8240826 | leaf | wild_type | 3.81 | HC |
| SRR8240819 | leaf | wild_type | 3.02 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 4.87 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 6.25 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.20 | HC |
| SRR504365 | leaf | wt | 9.44 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 3.57 | HC |
| SRR8611900 | leaf | Non-inoculated | 10.28 | HC |
| SRR8611901 | leaf | Non-inoculated | 10.51 | HC |
| SRR8611902 | leaf | Non-inoculated | 10.15 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 15.14 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 14.77 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 16.56 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 4.12 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 5.59 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 6.03 | HC |
| SRR6502100 | leaf | control | 4.83 | HC |
| SRR5856929 | leaf | control | 2.43 | HC |
| SRR5856936 | leaf | salt | 1.91 | HC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 8.11 | HC |
| SRR6168973 | leaf | none (control) | 57.39 | HC |
| SRR6168974 | leaf | none (control) | 57.74 | HC |
| SRR6168975 | leaf | none (control) | 62.67 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 28.80 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 5.89 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 45.60 | HC |
| SRR6168979 | leaf | none (control) | 18.77 | HC |
| SRR6168980 | leaf | none (control) | 20.71 | HC |
| SRR6168981 | leaf | none (control) | 47.94 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 17.42 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 24.80 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 24.28 | HC |
| SRR8582888 | panicle | AM | 3.49 | HC |
| SRR8582889 | panicle | AM | 2.96 | HC |
| SRR8582891 | panicle | PM | 10.33 | HC |
| SRR8582892 | panicle | PM | 8.41 | HC |
| SRR8582893 | panicle | PM | 12.36 | HC |
| SRR4947496 | root | control | 6.04 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 3.22 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 3.60 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 3.42 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 6.29 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 6.06 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 12.42 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 20.95 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 6.97 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 4.74 | HC |
| SRR5126157 | root | "mock,7_days" | 6.13 | HC |
| SRR5126167 | root | "mock,14_days" | 3.95 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 4.72 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 4.54 | HC |
| SRR4947480 | root | control | 6.99 | HC |
| SRR4947481 | root | control | 9.27 | HC |
| SRR4947484 | root | Al | 5.60 | HC |
| SRR4947485 | root | Al | 8.89 | HC |
| SRR4947489 | root | control | 5.24 | HC |
| SRR4947504 | root | control | 6.80 | HC |
| SRR6502105 | root | 100 mM NaCl | 6.04 | HC |
| SRR6441554 | seedling | wild_type | 8.16 | HC |
| SRR6441555 | seedling | wild_type | 8.12 | HC |
| SRR2154086 | seedling | wt | 4.71 | HC |
| SRR2154083 | seedling | wt | 4.29 | HC |
| SRR2154085 | seedling | wt | 5.01 | HC |
| SRR2154087 | seedling | wt | 5.57 | HC |
| SRR3098741 | seedling | wt | 5.52 | HC |
| SRR3098742 | seedling | wt | 6.52 | HC |
| SRR3098743 | seedling | wt | 5.54 | HC |
| SRR2857721 | seedling | drought_stress_6h | 3.44 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 6.53 | HC |
| SRR1944583 | seedling | no_treatment | 5.73 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 4.57 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 5.07 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 7.82 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 11.86 | HC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 18.88 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 11.13 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 10.52 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.93 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 9.06 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 9.58 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 4.22 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 4.62 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 4.25 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 6.72 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 9.33 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 7.73 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 12.34 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 11.10 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 5.36 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 9.60 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 10.22 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 6.08 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 4.46 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 3.83 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 7.10 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 6.70 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.53 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 4.75 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 4.05 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 10.60 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 10.85 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 9.28 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 5.11 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 3.96 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 6.24 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 5.22 | HC |