| SRR4457249 | 2nd_leaf | DAH4 | 22.87 | HC |
| SRR4457250 | 2nd_leaf | DAH4 | 20.55 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 29.31 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 21.13 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 18.77 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 16.78 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 17.33 | HC |
| SRR4457256 | 2nd_leaf | DAH20 | 16.07 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 18.15 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 14.09 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 12.29 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 12.28 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 16.31 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 23.36 | HC |
| SRR4457263 | 2nd_leaf | DAH36 | 6.38 | HC |
| SRR4457264 | 2nd_leaf | DAH44 | 8.95 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 5.01 | HC |
| SRR4457266 | 2nd_leaf | DAH44 | 10.46 | HC |
| SRR3745125 | anther | wt | 14.98 | HC |
| SRR3745126 | anther | wt | 15.14 | HC |
| SRR3745127 | anther | wt | 13.46 | HC |
| SRR358795 | callus | wt | 41.00 | HC |
| SRR358796 | callus | wt | 38.18 | HC |
| SRR358797 | callus | wt | 42.89 | HC |
| SRR358798 | callus | wt | 42.48 | HC |
| SRR6320473 | carpel | wt | 179.29 | HC |
| SRR6320498 | carpel | wt | 147.85 | HC |
| SRR5560727 | caryopsis | wild_type | 50.15 | HC |
| SRR5560728 | caryopsis | wild_type | 58.44 | HC |
| SRR5560729 | caryopsis | wild_type | 51.73 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 31.50 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 28.68 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 15.64 | HC |
| SRR4947495 | root | control | 120.31 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 27.12 | HC |
| SRR7265400 | coleoptile | 2dA | 17.29 | HC |
| SRR7265401 | coleoptile | 2dA | 16.77 | HC |
| SRR7265402 | coleoptile | 2dA | 16.73 | HC |
| SRR7265403 | coleoptile | 2dN | 17.65 | HC |
| SRR7265404 | coleoptile | 2dN | 21.01 | HC |
| SRR7265405 | coleoptile | 2dN | 14.09 | HC |
| SRR7265406 | coleoptile | 3dA | 15.82 | HC |
| SRR7265407 | coleoptile | 3dA | 14.57 | HC |
| SRR7265408 | coleoptile | 3dA | 10.60 | HC |
| SRR7265409 | coleoptile | 3dN | 20.31 | HC |
| SRR7265410 | coleoptile | 3dN | 15.90 | HC |
| SRR7265411 | coleoptile | 3dN | 14.00 | HC |
| SRR7265412 | coleoptile | 4dA | 10.87 | HC |
| SRR7265413 | coleoptile | 4dA | 27.88 | HC |
| SRR7265414 | coleoptile | 4dA | 14.02 | HC |
| SRR7265415 | coleoptile | 4dN | 21.06 | HC |
| SRR7265416 | coleoptile | 4dN | 17.28 | HC |
| SRR7265417 | coleoptile | 4dN | 15.71 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 14.53 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 13.68 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 12.69 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 17.07 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 16.40 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 91.99 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 63.67 | HC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 37.27 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 73.46 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 30.38 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 16.13 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 97.23 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 102.83 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 19.28 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 107.65 | HC |
| SRR7265373 | embryo | dry seed 0 h | 5.14 | HC |
| SRR7265374 | embryo | dry seed 0 h | 7.37 | HC |
| SRR7265376 | embryo | 1hA | 3.79 | HC |
| SRR7265378 | embryo | 1hA | 3.50 | HC |
| SRR7265379 | embryo | 1hN | 5.47 | HC |
| SRR7265380 | embryo | 1hN | 6.04 | HC |
| SRR7265381 | embryo | 1hN | 5.11 | HC |
| SRR7265386 | embryo | 3hN | 3.53 | HC |
| SRR7265387 | embryo | 3hN | 3.54 | HC |
| SRR7265388 | embryo | 12hA | 21.03 | HC |
| SRR7265389 | embryo | 12hA | 21.94 | HC |
| SRR7265390 | embryo | 12hA | 19.06 | HC |
| SRR7265391 | embryo | 12hN | 16.36 | HC |
| SRR7265392 | embryo | 12hN | 15.99 | HC |
| SRR7265393 | embryo | 12hN | 13.15 | HC |
| SRR7265394 | embryo | 24hA | 20.60 | HC |
| SRR7265395 | embryo | 24hA | 21.53 | HC |
| SRR7265396 | embryo | 24hA | 24.81 | HC |
| SRR7265397 | embryo | 24hN | 22.02 | HC |
| SRR7265398 | embryo | 24hN | 15.76 | HC |
| SRR7265399 | embryo | 24hN | 18.32 | HC |
| SRR2338866 | endosprem | control | 11.12 | HC |
| SRR2338867 | endosprem | control | 3.82 | HC |
| SRR2338868 | endosprem | high_temperature | 3.85 | HC |
| SRR2338869 | endosprem | high_temperature | 8.44 | HC |
| SRR976168 | flag_leaf | wild_type | 3.65 | HC |
| SRR4457231 | flag_leaf | DAH4 | 15.56 | HC |
| SRR4457232 | flag_leaf | DAH4 | 22.72 | HC |
| SRR4457233 | flag_leaf | DAH4 | 25.95 | HC |
| SRR4457234 | flag_leaf | DAH12 | 10.74 | HC |
| SRR4457235 | flag_leaf | DAH12 | 14.50 | HC |
| SRR4457236 | flag_leaf | DAH12 | 17.91 | HC |
| SRR4457237 | flag_leaf | DAH20 | 13.61 | HC |
| SRR4457238 | flag_leaf | DAH20 | 13.63 | HC |
| SRR4457239 | flag_leaf | DAH20 | 15.21 | HC |
| SRR4457240 | flag_leaf | DAH28 | 7.88 | HC |
| SRR4457241 | flag_leaf | DAH28 | 8.41 | HC |
| SRR4457242 | flag_leaf | DAH28 | 8.68 | HC |
| SRR4457243 | flag_leaf | DAH36 | 15.77 | HC |
| SRR4457244 | flag_leaf | DAH36 | 15.26 | HC |
| SRR4457245 | flag_leaf | DAH36 | 17.75 | HC |
| SRR4457246 | flag_leaf | DAH44 | 8.90 | HC |
| SRR4457247 | flag_leaf | DAH44 | 8.63 | HC |
| SRR4457248 | flag_leaf | DAH44 | 9.29 | HC |
| SRR1213690 | flower | wt(flower buds) | 22.63 | HC |
| SRR1213691 | flower | wt | 24.30 | HC |
| SRR8060835 | leaf | wild_type | 10.09 | HC |
| SRR8060836 | leaf | wild_type | 22.66 | HC |
| SRR8060837 | leaf | wild_type | 13.84 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 27.00 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 23.49 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 25.41 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 23.12 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 39.47 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 22.96 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 26.37 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 28.25 | HC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 31.33 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 26.67 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 34.27 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 23.60 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 32.06 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 33.81 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 20.94 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 40.99 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 28.29 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 26.97 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 31.57 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 31.46 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 19.30 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 32.66 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 34.72 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 30.29 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 29.27 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 36.86 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 23.61 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 25.04 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 49.66 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 42.47 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 30.08 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 49.57 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 50.55 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 35.35 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 30.36 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 23.62 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 26.23 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 45.23 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 31.23 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 32.16 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 11.06 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 13.74 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 19.43 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 19.89 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 11.06 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 13.74 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 19.43 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 19.89 | HC |
| SRR1761528 | leaf | drought | 11.06 | HC |
| SRR1761529 | leaf | drought | 13.74 | HC |
| SRR1761530 | leaf | control | 19.43 | HC |
| SRR1761531 | leaf | control | 19.89 | HC |
| SRR504365 | leaf | wt | 51.26 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 13.61 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 9.20 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 12.17 | HC |
| SRR6417967 | leaf | H2O_control | 15.01 | HC |
| SRR6417968 | leaf | H2O_control | 10.91 | HC |
| SRR6417969 | leaf | H2O_control | 10.47 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 7.62 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 8.77 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 10.45 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 10.74 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 10.64 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 13.85 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 9.56 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 11.91 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 9.76 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 11.93 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 8.70 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 13.00 | HC |
| SRR8611900 | leaf | Non-inoculated | 13.80 | HC |
| SRR8611901 | leaf | Non-inoculated | 13.98 | HC |
| SRR8611902 | leaf | Non-inoculated | 12.32 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 13.31 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 16.71 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 10.06 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 25.84 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 25.85 | HC |
| SRR1213692 | leaf | wt | 17.28 | HC |
| SRR1213693 | leaf | wt | 17.70 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 6.54 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 6.42 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 7.22 | HC |
| SRR6502088 | leaf | control | 9.27 | HC |
| SRR6502089 | leaf | control | 6.38 | HC |
| SRR6502090 | leaf | control | 6.07 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 7.59 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 10.60 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 6.28 | HC |
| SRR6502100 | leaf | control | 10.83 | HC |
| SRR6502101 | leaf | control | 9.27 | HC |
| SRR6502102 | leaf | control | 8.44 | HC |
| SRR5856927 | leaf | control | 74.63 | HC |
| SRR5856928 | leaf | control | 59.28 | HC |
| SRR5856929 | leaf | control | 78.93 | HC |
| SRR5856930 | leaf | salt | 34.20 | HC |
| SRR5856931 | leaf | salt | 54.31 | HC |
| SRR5856932 | leaf | salt | 42.61 | HC |
| SRR5856933 | leaf | control | 109.55 | HC |
| SRR5856934 | leaf | control | 85.34 | HC |
| SRR5856935 | leaf | control | 104.36 | HC |
| SRR5856936 | leaf | salt | 47.43 | HC |
| SRR5856937 | leaf | salt | 62.62 | HC |
| SRR5856938 | leaf | salt | 49.75 | HC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 52.71 | HC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 53.62 | HC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 57.44 | HC |
| SRR6053395 | leaf | gibberellic acid (GA) | 60.84 | HC |
| SRR6053396 | leaf | gibberellic acid (GA) | 60.30 | HC |
| SRR6053397 | leaf | gibberellic acid (GA) | 44.30 | HC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 56.84 | HC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 49.21 | HC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 54.19 | HC |
| SRR6168973 | leaf | none (control) | 29.15 | HC |
| SRR6168974 | leaf | none (control) | 26.47 | HC |
| SRR6168975 | leaf | none (control) | 24.37 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 24.38 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 3.43 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 38.30 | HC |
| SRR6168980 | leaf | none (control) | 2.38 | HC |
| SRR6168981 | leaf | none (control) | 10.43 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 8.36 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 13.19 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 10.12 | HC |
| SRR8582888 | panicle | AM | 14.39 | HC |
| SRR8582889 | panicle | AM | 8.42 | HC |
| SRR8582890 | panicle | AM | 19.96 | HC |
| SRR8582891 | panicle | PM | 39.30 | HC |
| SRR8582892 | panicle | PM | 55.41 | HC |
| SRR8582893 | panicle | PM | 34.41 | HC |
| SRR5110429 | panicle | Dawn | 144.87 | HC |
| SRR5110430 | panicle | Dawn | 120.93 | HC |
| SRR5110431 | panicle | Dawn | 107.25 | HC |
| SRR5110432 | panicle | Dawn | 95.79 | HC |
| SRR4947496 | root | control | 22.57 | HC |
| SRR5110433 | panicle | Dawn + 3.5h | 81.93 | HC |
| SRR5110434 | panicle | Dawn + 3.5h | 64.38 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 59.28 | HC |
| SRR5110436 | panicle | Dawn + 3.5h | 85.01 | HC |
| SRR5110437 | panicle | Dawn + 7h | 114.17 | HC |
| SRR5110438 | panicle | Dawn + 7h | 103.18 | HC |
| SRR5110439 | panicle | Dawn + 7h | 94.35 | HC |
| SRR5110440 | panicle | Dawn + 7h | 103.47 | HC |
| SRR5110441 | panicle | Dawn + 10.5h | 80.41 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 108.47 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 111.67 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 145.09 | HC |
| SRR5110445 | panicle | Dusk | 114.49 | HC |
| SRR5110446 | panicle | Dusk | 141.69 | HC |
| SRR5110447 | panicle | Dusk | 133.22 | HC |
| SRR5110448 | panicle | Dusk | 166.07 | HC |
| SRR5110449 | panicle | Dawn + 14h | 141.76 | HC |
| SRR5110450 | panicle | Dawn + 14h | 109.82 | HC |
| SRR5110451 | panicle | Dawn + 14h | 113.43 | HC |
| SRR5110452 | panicle | Dawn + 14h | 150.10 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 106.68 | HC |
| SRR5110454 | panicle | Dawn + 17.5h | 74.37 | HC |
| SRR5110455 | panicle | Dawn + 17.5h | 93.84 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 128.76 | HC |
| SRR5110457 | panicle | Dawn + 21h | 83.89 | HC |
| SRR5110458 | panicle | Dawn + 21h | 61.69 | HC |
| SRR5110459 | panicle | Dawn + 21h | 98.58 | HC |
| SRR5110460 | panicle | Dawn + 21h | 118.96 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 7.11 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 4.71 | HC |
| SRR1633182 | panicle | WT | 17.69 | HC |
| SRR1633185 | panicle | WT | 27.18 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 15.02 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 20.92 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 23.18 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 31.12 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 57.34 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 52.70 | HC |
| SRR5126147 | root | "mock,1_day" | 28.43 | HC |
| SRR5126148 | root | "mock,1_day" | 21.36 | HC |
| SRR5126149 | root | "mock,1_day" | 27.13 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 27.99 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 29.06 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 19.76 | HC |
| SRR5126153 | root | "mock,7_days" | 36.76 | HC |
| SRR5126155 | root | "mock,7_days" | 40.03 | HC |
| SRR5126157 | root | "mock,7_days" | 54.84 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 37.06 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 39.83 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 35.07 | HC |
| SRR5126165 | root | "mock,14_days" | 31.15 | HC |
| SRR5126167 | root | "mock,14_days" | 34.47 | HC |
| SRR5126169 | root | "mock,14_days" | 40.94 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 37.09 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 32.32 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 30.64 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 3.23 | HC |
| SRR1213694 | root | wt | 21.12 | HC |
| SRR1213695 | root | wt | 26.26 | HC |
| SRR4947478 | root | control | 76.12 | HC |
| SRR4947479 | root | control | 83.88 | HC |
| SRR4947480 | root | control | 23.71 | HC |
| SRR4947481 | root | control | 31.66 | HC |
| SRR4947482 | root | Al | 132.29 | HC |
| SRR4947483 | root | Al | 94.19 | HC |
| SRR4947484 | root | Al | 21.69 | HC |
| SRR4947485 | root | Al | 24.01 | HC |
| SRR4947487 | root | control | 88.44 | HC |
| SRR4947488 | root | control | 22.10 | HC |
| SRR4947489 | root | control | 24.45 | HC |
| SRR4947490 | root | Al | 89.24 | HC |
| SRR4947491 | root | Al | 131.81 | HC |
| SRR4947492 | root | Al | 23.96 | HC |
| SRR4947493 | root | Al | 24.72 | HC |
| SRR4947494 | root | control | 94.83 | HC |
| SRR4947497 | root | control | 32.90 | HC |
| SRR4947498 | root | Al | 151.99 | HC |
| SRR4947499 | root | Al | 143.70 | HC |
| SRR4947500 | root | Al | 39.05 | HC |
| SRR4947501 | root | Al | 52.41 | HC |
| SRR4947502 | root | control | 173.09 | HC |
| SRR4947503 | root | control | 139.87 | HC |
| SRR4947504 | root | control | 27.95 | HC |
| SRR4947505 | root | control | 27.97 | HC |
| SRR4947506 | root | Al | 100.71 | HC |
| SRR4947507 | root | Al | 213.32 | HC |
| SRR4947508 | root | Al | 28.67 | HC |
| SRR4947509 | root | Al | 33.90 | HC |
| SRR6502091 | root | 100 mM NaCl | 20.19 | HC |
| SRR6502092 | root | 100 mM NaCl | 17.37 | HC |
| SRR6502093 | root | 100 mM NaCl | 18.21 | HC |
| SRR6502094 | root | control | 9.83 | HC |
| SRR6502095 | root | control | 11.30 | HC |
| SRR6502096 | root | control | 13.83 | HC |
| SRR6502103 | root | 100 mM NaCl | 15.53 | HC |
| SRR6502104 | root | 100 mM NaCl | 16.95 | HC |
| SRR6502105 | root | 100 mM NaCl | 18.96 | HC |
| SRR6502106 | root | control | 14.60 | HC |
| SRR6502107 | root | control | 15.60 | HC |
| SRR6502108 | root | control | 19.72 | HC |
| SRR1740434 | root_differentiation_zone | wt | 7.43 | HC |
| SRR1740435 | root_differentiation_zone | wt | 8.13 | HC |
| SRR1740436 | root_differentiation_zone | wt | 13.57 | HC |
| SRR1740431 | root_elongation_zone | wt | 5.99 | HC |
| SRR1740432 | root_elongation_zone | wt | 21.28 | HC |
| SRR1740433 | root_elongation_zone | wt | 15.08 | HC |
| SRR1740428 | root_meristematic_zone | wt | 10.23 | HC |
| SRR1740429 | root_meristematic_zone | wt | 18.76 | HC |
| SRR1740430 | root_meristematic_zone | wt | 16.75 | HC |
| SRR6441554 | seedling | wild_type | 11.72 | HC |
| SRR6441555 | seedling | wild_type | 12.71 | HC |
| SRR2154086 | seedling | wt | 21.91 | HC |
| SRR2154082 | seedling | wt | 82.14 | HC |
| SRR2154083 | seedling | wt | 79.11 | HC |
| SRR2154084 | seedling | wt | 89.16 | HC |
| SRR2154085 | seedling | wt | 20.25 | HC |
| SRR2154087 | seedling | wt | 22.67 | HC |
| SRR3098741 | seedling | wt | 22.19 | HC |
| SRR3098742 | seedling | wt | 22.40 | HC |
| SRR3098743 | seedling | wt | 19.74 | HC |
| SRR2857719 | seedling | drought_stress_0h | 34.06 | HC |
| SRR2857720 | seedling | drought_stress_1h | 29.74 | HC |
| SRR2857721 | seedling | drought_stress_6h | 13.81 | HC |
| SRR1944583 | seedling | no_treatment | 9.37 | HC |
| SRR358791 | seedling | wt | 16.76 | HC |
| SRR358792 | seedling | wt | 18.72 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 6.91 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 6.95 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 7.00 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 3.37 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 4.02 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 4.17 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 16.80 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 19.63 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 23.30 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 20.92 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 16.58 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 13.16 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 18.82 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 21.20 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 30.32 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 25.24 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 18.45 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 14.94 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 15.04 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 13.15 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 6.07 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 6.68 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 11.46 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 14.68 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 20.92 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 18.68 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 64.07 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 54.91 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 62.90 | HC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 62.99 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 78.16 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 64.42 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 78.16 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 56.70 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 56.64 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 38.18 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 57.25 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 47.89 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 15.77 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 19.98 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 11.77 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 17.54 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 15.18 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 16.91 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 20.42 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 15.14 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 12.44 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 16.07 | HC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 21.11 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 12.24 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 13.22 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 19.22 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 22.94 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 20.03 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 8.72 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 35.53 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 23.78 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 22.10 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 40.01 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 23.24 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 42.49 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 23.96 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 35.34 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 23.51 | HC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 30.13 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 27.52 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 37.06 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 34.05 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 32.11 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 24.51 | HC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 72.64 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 61.08 | HC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 60.63 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 52.36 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 72.14 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 44.60 | HC |