| SRR4457251 | 2nd_leaf | DAH4 | 4.81 | HC |
| SRR358795 | callus | wt | 12.85 | HC |
| SRR358796 | callus | wt | 16.62 | HC |
| SRR358797 | callus | wt | 11.39 | HC |
| SRR358798 | callus | wt | 15.06 | HC |
| SRR5560727 | caryopsis | wild_type | 19.13 | HC |
| SRR5560728 | caryopsis | wild_type | 22.42 | HC |
| SRR5560729 | caryopsis | wild_type | 20.10 | HC |
| SRR4947495 | root | control | 9.99 | HC |
| SRR7265402 | coleoptile | 2dA | 3.84 | HC |
| SRR7265404 | coleoptile | 2dN | 4.21 | HC |
| SRR7265405 | coleoptile | 2dN | 4.47 | HC |
| SRR7265412 | coleoptile | 4dA | 4.86 | HC |
| SRR7265413 | coleoptile | 4dA | 5.70 | HC |
| SRR7265414 | coleoptile | 4dA | 5.69 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 4.28 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 4.30 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 8.90 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 11.39 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 9.33 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 7.03 | HC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 7.54 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 7.19 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 8.70 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 9.63 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 9.30 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 9.46 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 10.43 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 9.02 | HC |
| SRR7265389 | embryo | 12hA | 5.61 | HC |
| SRR7265395 | embryo | 24hA | 5.92 | HC |
| SRR2338867 | endosprem | control | 2.78 | HC |
| SRR2338868 | endosprem | high_temperature | 4.54 | HC |
| SRR2338869 | endosprem | high_temperature | 6.09 | HC |
| SRR4457232 | flag_leaf | DAH4 | 3.13 | HC |
| SRR4457233 | flag_leaf | DAH4 | 3.80 | HC |
| SRR1213690 | flower | wt(flower buds) | 8.08 | HC |
| SRR1213691 | flower | wt | 8.67 | HC |
| SRR8060835 | leaf | wild_type | 3.70 | HC |
| SRR8060836 | leaf | wild_type | 6.49 | HC |
| SRR8060837 | leaf | wild_type | 4.77 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 4.69 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 8.29 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 7.25 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 8.56 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 6.04 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 7.14 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 8.09 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 6.25 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 8.36 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 7.72 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 7.49 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 8.02 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 7.02 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 7.22 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 7.11 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 5.13 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 7.04 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 6.59 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 7.34 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.41 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 6.08 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 5.53 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.88 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 7.09 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 6.27 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 6.27 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 6.73 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 6.73 | HC |
| SRR1761531 | leaf | control | 6.73 | HC |
| SRR504365 | leaf | wt | 4.64 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 4.33 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 4.70 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 5.51 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 5.90 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 4.56 | HC |
| SRR8611900 | leaf | Non-inoculated | 6.29 | HC |
| SRR8611901 | leaf | Non-inoculated | 6.46 | HC |
| SRR8611902 | leaf | Non-inoculated | 6.05 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 11.72 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 14.48 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 12.44 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 6.16 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 6.40 | HC |
| SRR1213693 | leaf | wt | 4.46 | HC |
| SRR5856927 | leaf | control | 5.35 | HC |
| SRR5856928 | leaf | control | 4.42 | HC |
| SRR5856929 | leaf | control | 6.71 | HC |
| SRR5856930 | leaf | salt | 2.34 | HC |
| SRR5856931 | leaf | salt | 2.14 | HC |
| SRR5856932 | leaf | salt | 2.14 | HC |
| SRR5856933 | leaf | control | 4.95 | HC |
| SRR5856934 | leaf | control | 4.38 | HC |
| SRR5856935 | leaf | control | 4.40 | HC |
| SRR5856936 | leaf | salt | 2.55 | HC |
| SRR5856937 | leaf | salt | 2.33 | HC |
| SRR5856938 | leaf | salt | 2.07 | HC |
| SRR6168973 | leaf | none (control) | 6.59 | HC |
| SRR6168975 | leaf | none (control) | 8.21 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 17.40 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 11.22 | HC |
| SRR6168980 | leaf | none (control) | 2.13 | HC |
| SRR6168981 | leaf | none (control) | 13.69 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 9.08 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 11.70 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 13.62 | HC |
| SRR8582888 | panicle | AM | 4.01 | HC |
| SRR8582889 | panicle | AM | 3.14 | HC |
| SRR8582890 | panicle | AM | 4.54 | HC |
| SRR4947496 | root | control | 8.79 | HC |
| SRR5110433 | panicle | Dawn + 3.5h | 6.22 | HC |
| SRR5110434 | panicle | Dawn + 3.5h | 5.70 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 4.94 | HC |
| SRR5110436 | panicle | Dawn + 3.5h | 5.83 | HC |
| SRR5110437 | panicle | Dawn + 7h | 6.01 | HC |
| SRR5110438 | panicle | Dawn + 7h | 7.25 | HC |
| SRR5110440 | panicle | Dawn + 7h | 7.07 | HC |
| SRR5110441 | panicle | Dawn + 10.5h | 5.11 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 8.53 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 7.62 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 8.81 | HC |
| SRR5110445 | panicle | Dusk | 5.94 | HC |
| SRR5110446 | panicle | Dusk | 10.17 | HC |
| SRR5110447 | panicle | Dusk | 7.00 | HC |
| SRR5110448 | panicle | Dusk | 8.72 | HC |
| SRR5110451 | panicle | Dawn + 14h | 4.99 | HC |
| SRR5110452 | panicle | Dawn + 14h | 5.83 | HC |
| SRR5110457 | panicle | Dawn + 21h | 4.73 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 4.06 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 3.71 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 6.09 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 6.16 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 9.50 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 9.83 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 10.04 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 9.83 | HC |
| SRR5126147 | root | "mock,1_day" | 8.89 | HC |
| SRR5126148 | root | "mock,1_day" | 9.69 | HC |
| SRR5126149 | root | "mock,1_day" | 11.17 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 11.06 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 11.19 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 7.62 | HC |
| SRR5126153 | root | "mock,7_days" | 6.57 | HC |
| SRR5126155 | root | "mock,7_days" | 7.76 | HC |
| SRR5126157 | root | "mock,7_days" | 16.15 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 8.33 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 6.47 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 6.16 | HC |
| SRR5126165 | root | "mock,14_days" | 8.42 | HC |
| SRR5126167 | root | "mock,14_days" | 5.52 | HC |
| SRR5126169 | root | "mock,14_days" | 10.46 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 9.75 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 9.69 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 10.39 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 2.99 | HC |
| SRR1213694 | root | wt | 6.03 | HC |
| SRR1213695 | root | wt | 5.09 | HC |
| SRR4947478 | root | control | 7.28 | HC |
| SRR4947479 | root | control | 7.37 | HC |
| SRR4947480 | root | control | 9.31 | HC |
| SRR4947481 | root | control | 12.02 | HC |
| SRR4947482 | root | Al | 5.14 | HC |
| SRR4947483 | root | Al | 4.27 | HC |
| SRR4947484 | root | Al | 8.52 | HC |
| SRR4947485 | root | Al | 7.48 | HC |
| SRR4947487 | root | control | 7.99 | HC |
| SRR4947488 | root | control | 9.40 | HC |
| SRR4947489 | root | control | 12.87 | HC |
| SRR4947490 | root | Al | 7.09 | HC |
| SRR4947491 | root | Al | 9.48 | HC |
| SRR4947492 | root | Al | 7.60 | HC |
| SRR4947493 | root | Al | 7.17 | HC |
| SRR4947494 | root | control | 8.61 | HC |
| SRR4947497 | root | control | 15.20 | HC |
| SRR4947498 | root | Al | 9.39 | HC |
| SRR4947499 | root | Al | 8.03 | HC |
| SRR4947500 | root | Al | 7.80 | HC |
| SRR4947501 | root | Al | 10.71 | HC |
| SRR4947502 | root | control | 12.72 | HC |
| SRR4947503 | root | control | 10.81 | HC |
| SRR4947504 | root | control | 15.20 | HC |
| SRR4947505 | root | control | 16.38 | HC |
| SRR4947506 | root | Al | 6.04 | HC |
| SRR4947507 | root | Al | 8.56 | HC |
| SRR4947508 | root | Al | 6.97 | HC |
| SRR4947509 | root | Al | 8.82 | HC |
| SRR6502091 | root | 100 mM NaCl | 10.42 | HC |
| SRR6502092 | root | 100 mM NaCl | 12.23 | HC |
| SRR6502093 | root | 100 mM NaCl | 11.76 | HC |
| SRR6502094 | root | control | 11.64 | HC |
| SRR6502095 | root | control | 12.70 | HC |
| SRR6502096 | root | control | 9.18 | HC |
| SRR6502103 | root | 100 mM NaCl | 8.11 | HC |
| SRR6502104 | root | 100 mM NaCl | 9.69 | HC |
| SRR6502105 | root | 100 mM NaCl | 11.02 | HC |
| SRR6502106 | root | control | 11.17 | HC |
| SRR6502107 | root | control | 9.56 | HC |
| SRR6502108 | root | control | 8.86 | HC |
| SRR1740435 | root_differentiation_zone | wt | 4.46 | HC |
| SRR1740436 | root_differentiation_zone | wt | 5.55 | HC |
| SRR1740431 | root_elongation_zone | wt | 4.31 | HC |
| SRR1740432 | root_elongation_zone | wt | 5.52 | HC |
| SRR1740433 | root_elongation_zone | wt | 5.88 | HC |
| SRR1740428 | root_meristematic_zone | wt | 5.54 | HC |
| SRR1740429 | root_meristematic_zone | wt | 7.81 | HC |
| SRR1740430 | root_meristematic_zone | wt | 7.82 | HC |
| SRR6441554 | seedling | wild_type | 4.02 | HC |
| SRR6441555 | seedling | wild_type | 4.28 | HC |
| SRR2154086 | seedling | wt | 5.83 | HC |
| SRR2154082 | seedling | wt | 4.16 | HC |
| SRR2154084 | seedling | wt | 5.00 | HC |
| SRR2154085 | seedling | wt | 4.91 | HC |
| SRR2154087 | seedling | wt | 5.37 | HC |
| SRR2857719 | seedling | drought_stress_0h | 6.67 | HC |
| SRR2857721 | seedling | drought_stress_6h | 4.99 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 4.35 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 6.65 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 7.17 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 3.83 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 3.82 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 3.52 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 3.60 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.55 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 3.10 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 8.01 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 9.33 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 8.70 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 8.47 | HC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 9.70 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 7.29 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 10.75 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 8.81 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 11.20 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 9.72 | HC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 8.44 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 8.94 | HC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 9.89 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 8.01 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 8.63 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 8.29 | HC |