| SRR4457250 | 2nd_leaf | DAH4 | 6.20 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 4.87 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 3.70 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 5.52 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 7.40 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 5.51 | HC |
| SRR358795 | callus | wt | 12.04 | HC |
| SRR358798 | callus | wt | 11.92 | HC |
| SRR5560728 | caryopsis | wild_type | 5.31 | HC |
| SRR5560729 | caryopsis | wild_type | 5.45 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 6.44 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 7.05 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 6.65 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 5.87 | HC |
| SRR7265400 | coleoptile | 2dA | 6.00 | HC |
| SRR7265401 | coleoptile | 2dA | 6.71 | HC |
| SRR7265402 | coleoptile | 2dA | 5.32 | HC |
| SRR7265403 | coleoptile | 2dN | 6.66 | HC |
| SRR7265404 | coleoptile | 2dN | 4.59 | HC |
| SRR7265405 | coleoptile | 2dN | 4.70 | HC |
| SRR7265406 | coleoptile | 3dA | 5.57 | HC |
| SRR7265407 | coleoptile | 3dA | 4.93 | HC |
| SRR7265408 | coleoptile | 3dA | 3.66 | HC |
| SRR7265409 | coleoptile | 3dN | 5.87 | HC |
| SRR7265410 | coleoptile | 3dN | 7.50 | HC |
| SRR7265411 | coleoptile | 3dN | 5.56 | HC |
| SRR7265415 | coleoptile | 4dN | 6.63 | HC |
| SRR7265416 | coleoptile | 4dN | 5.76 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 10.24 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 7.59 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 7.59 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 5.99 | HC |
| SRR7265374 | embryo | dry seed 0 h | 4.50 | HC |
| SRR7265376 | embryo | 1hA | 4.85 | HC |
| SRR7265378 | embryo | 1hA | 5.66 | HC |
| SRR7265380 | embryo | 1hN | 5.51 | HC |
| SRR7265384 | embryo | 3hA | 6.18 | HC |
| SRR7265386 | embryo | 3hN | 4.06 | HC |
| SRR7265387 | embryo | 3hN | 4.33 | HC |
| SRR7265388 | embryo | 12hA | 8.81 | HC |
| SRR7265389 | embryo | 12hA | 11.69 | HC |
| SRR7265390 | embryo | 12hA | 11.77 | HC |
| SRR7265391 | embryo | 12hN | 12.95 | HC |
| SRR7265392 | embryo | 12hN | 9.08 | HC |
| SRR7265393 | embryo | 12hN | 8.75 | HC |
| SRR7265394 | embryo | 24hA | 8.66 | HC |
| SRR7265395 | embryo | 24hA | 8.57 | HC |
| SRR7265396 | embryo | 24hA | 8.88 | HC |
| SRR7265397 | embryo | 24hN | 8.27 | HC |
| SRR7265398 | embryo | 24hN | 7.75 | HC |
| SRR7265399 | embryo | 24hN | 7.11 | HC |
| SRR4457232 | flag_leaf | DAH4 | 3.49 | HC |
| SRR4457233 | flag_leaf | DAH4 | 3.70 | HC |
| SRR4457244 | flag_leaf | DAH36 | 4.26 | HC |
| SRR4457245 | flag_leaf | DAH36 | 4.77 | HC |
| SRR4457246 | flag_leaf | DAH44 | 4.67 | HC |
| SRR1213690 | flower | wt(flower buds) | 14.40 | HC |
| SRR1213691 | flower | wt | 14.54 | HC |
| SRR8060837 | leaf | wild_type | 3.73 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 5.28 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 4.86 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 6.20 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 13.40 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 8.82 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 12.69 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 15.75 | HC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 14.45 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 13.21 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 11.97 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 11.00 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 12.00 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 13.14 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 8.76 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 11.99 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 13.19 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 9.48 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 10.66 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 9.74 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 7.38 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 6.18 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 11.75 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 11.22 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 11.43 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 13.73 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 11.91 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 15.67 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 9.33 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 8.84 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 14.11 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 8.84 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 10.72 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 9.38 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 7.00 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 11.26 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 10.24 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 8.01 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 9.03 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 9.03 | HC |
| SRR1761528 | leaf | drought | 9.03 | HC |
| SRR504365 | leaf | wt | 19.90 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 9.46 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 3.38 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 4.08 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 9.31 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 7.93 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 8.46 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 7.81 | HC |
| SRR8611900 | leaf | Non-inoculated | 7.53 | HC |
| SRR8611901 | leaf | Non-inoculated | 6.58 | HC |
| SRR8611902 | leaf | Non-inoculated | 6.17 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 5.20 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 7.45 | HC |
| SRR1213692 | leaf | wt | 24.07 | HC |
| SRR1213693 | leaf | wt | 15.13 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 9.46 | HC |
| SRR6502088 | leaf | control | 6.81 | HC |
| SRR6502089 | leaf | control | 6.99 | HC |
| SRR6502090 | leaf | control | 6.38 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 7.21 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 5.94 | HC |
| SRR6502100 | leaf | control | 5.08 | HC |
| SRR6502101 | leaf | control | 7.12 | HC |
| SRR6168973 | leaf | none (control) | 7.28 | HC |
| SRR6168974 | leaf | none (control) | 8.79 | HC |
| SRR6168975 | leaf | none (control) | 7.63 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 8.01 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 9.34 | HC |
| SRR8582888 | panicle | AM | 4.65 | HC |
| SRR8582889 | panicle | AM | 5.11 | HC |
| SRR8582890 | panicle | AM | 4.78 | HC |
| SRR8582891 | panicle | PM | 18.55 | HC |
| SRR8582892 | panicle | PM | 12.14 | HC |
| SRR8582893 | panicle | PM | 13.71 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 3.01 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 2.55 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 5.39 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 6.10 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 7.61 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 8.54 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 6.76 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 6.15 | HC |
| SRR5126153 | root | "mock,7_days" | 4.48 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 3.44 | HC |
| SRR1213694 | root | wt | 5.62 | HC |
| SRR1213695 | root | wt | 15.34 | HC |
| SRR6502091 | root | 100 mM NaCl | 7.14 | HC |
| SRR6502104 | root | 100 mM NaCl | 7.31 | HC |
| SRR6502105 | root | 100 mM NaCl | 5.44 | HC |
| SRR6502107 | root | control | 5.10 | HC |
| SRR1740434 | root_differentiation_zone | wt | 4.78 | HC |
| SRR1740432 | root_elongation_zone | wt | 4.40 | HC |
| SRR1740428 | root_meristematic_zone | wt | 10.43 | HC |
| SRR1740429 | root_meristematic_zone | wt | 11.79 | HC |
| SRR1740430 | root_meristematic_zone | wt | 12.62 | HC |
| SRR6441554 | seedling | wild_type | 6.00 | HC |
| SRR6441555 | seedling | wild_type | 4.18 | HC |
| SRR2154086 | seedling | wt | 14.10 | HC |
| SRR2154085 | seedling | wt | 11.73 | HC |
| SRR2154087 | seedling | wt | 13.47 | HC |
| SRR3098743 | seedling | wt | 2.83 | HC |
| SRR2857721 | seedling | drought_stress_6h | 3.21 | HC |
| SRR1944583 | seedling | no_treatment | 4.74 | HC |
| SRR358793 | seedling | wt | 9.09 | HC |
| SRR358794 | seedling | wt | 9.49 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 10.54 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 5.37 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 3.31 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 7.77 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 6.10 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 6.78 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 4.65 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 4.14 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 6.26 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 4.84 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 8.75 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 7.09 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 2.82 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 7.34 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 7.03 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 11.30 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 5.27 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 18.10 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 13.25 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 27.49 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 15.69 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 11.52 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 12.15 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 13.88 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 17.35 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 15.78 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 18.77 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 21.37 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 10.51 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 13.54 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 15.74 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 12.34 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 12.55 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 10.16 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 21.96 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 17.33 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 16.74 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 15.91 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 11.54 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 13.73 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 10.93 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 7.69 | HC |
| SRR1617559 | shoot_apical_meristem | no collect | 16.11 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 14.35 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 16.36 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 14.87 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 7.52 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 9.05 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 8.52 | HC |