| SRR3745125 | anther | wt | 9.59 | HC |
| SRR3745127 | anther | wt | 5.73 | HC |
| SRR5560727 | caryopsis | wild_type | 8.62 | HC |
| SRR5560728 | caryopsis | wild_type | 8.78 | HC |
| SRR5560729 | caryopsis | wild_type | 11.29 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 5.51 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 6.65 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 4.29 | HC |
| SRR2338867 | endosprem | control | 3.24 | HC |
| SRR2338868 | endosprem | high_temperature | 3.21 | HC |
| SRR2338869 | endosprem | high_temperature | 5.55 | HC |
| SRR1213690 | flower | wt(flower buds) | 6.71 | HC |
| SRR1213691 | flower | wt | 6.26 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 4.49 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 4.27 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 7.70 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 7.10 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 5.87 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 5.92 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 5.28 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 6.98 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 8.10 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 6.35 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 6.01 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 6.41 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 5.58 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 8.32 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 5.48 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.16 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 7.05 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 7.22 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 6.82 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 6.91 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.81 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 6.78 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 8.79 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 5.39 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 5.31 | HC |
| SRR8611900 | leaf | Non-inoculated | 3.90 | HC |
| SRR8611901 | leaf | Non-inoculated | 5.81 | HC |
| SRR8611902 | leaf | Non-inoculated | 3.65 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 5.75 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 5.35 | HC |
| SRR1213692 | leaf | wt | 4.83 | HC |
| SRR1213693 | leaf | wt | 4.19 | HC |
| SRR6168974 | leaf | none (control) | 5.23 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 7.32 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 3.16 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 10.19 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 10.34 | HC |
| SRR5126147 | root | "mock,1_day" | 5.39 | HC |
| SRR5126148 | root | "mock,1_day" | 6.41 | HC |
| SRR5126149 | root | "mock,1_day" | 6.58 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 6.26 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 8.63 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 5.98 | HC |
| SRR5126153 | root | "mock,7_days" | 5.27 | HC |
| SRR5126155 | root | "mock,7_days" | 5.65 | HC |
| SRR5126157 | root | "mock,7_days" | 6.51 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 6.83 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 7.36 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 8.63 | HC |
| SRR5126165 | root | "mock,14_days" | 7.16 | HC |
| SRR5126167 | root | "mock,14_days" | 5.01 | HC |
| SRR5126169 | root | "mock,14_days" | 5.88 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 7.08 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 7.46 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 8.58 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 3.90 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 3.01 | HC |
| SRR4947501 | root | Al | 7.18 | HC |
| SRR4947509 | root | Al | 6.01 | HC |
| SRR1740432 | root_elongation_zone | wt | 6.16 | HC |
| SRR1740433 | root_elongation_zone | wt | 3.96 | HC |
| SRR1740430 | root_meristematic_zone | wt | 4.32 | HC |
| SRR6441554 | seedling | wild_type | 3.67 | HC |
| SRR2154086 | seedling | wt | 5.26 | HC |
| SRR2154085 | seedling | wt | 4.58 | HC |
| SRR2154087 | seedling | wt | 7.95 | HC |
| SRR3098741 | seedling | wt | 3.06 | HC |
| SRR3098742 | seedling | wt | 4.45 | HC |
| SRR2857720 | seedling | drought_stress_1h | 4.81 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 4.00 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 4.21 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 4.46 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 9.07 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 9.98 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 8.65 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 8.52 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 9.04 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 8.16 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 9.05 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 10.14 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 11.58 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 7.62 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 8.56 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 8.47 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 12.26 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 11.02 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 14.02 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 7.47 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 7.73 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 8.52 | HC |