| SRR6320498 | carpel | wt | 8.19 | HC |
| SRR5560727 | caryopsis | wild_type | 12.96 | HC |
| SRR5560728 | caryopsis | wild_type | 12.52 | HC |
| SRR5560729 | caryopsis | wild_type | 7.53 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 16.77 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 12.51 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 12.48 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 14.72 | HC |
| SRR7265400 | coleoptile | 2dA | 3.99 | HC |
| SRR7265401 | coleoptile | 2dA | 3.73 | HC |
| SRR7265402 | coleoptile | 2dA | 4.21 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 8.73 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 8.39 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 5.07 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 9.61 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 4.98 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 7.42 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 8.87 | HC |
| SRR2338867 | endosprem | control | 4.07 | HC |
| SRR2338868 | endosprem | high_temperature | 4.48 | HC |
| SRR2338869 | endosprem | high_temperature | 6.40 | HC |
| SRR8060837 | leaf | wild_type | 2.81 | HC |
| SRR8240824 | leaf | wild_type | 9.53 | HC |
| SRR8240825 | leaf | wild_type | 13.53 | HC |
| SRR8240826 | leaf | wild_type | 5.20 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 14.86 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 13.24 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 7.66 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 9.58 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 7.96 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 8.55 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 6.33 | HC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 9.80 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 9.32 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 6.84 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 9.51 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 8.93 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 7.19 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 7.21 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 6.38 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 8.37 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 7.94 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 5.09 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 8.05 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 5.98 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 6.00 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 9.26 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 9.16 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 8.18 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 7.01 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 10.02 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 9.25 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 8.73 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 6.78 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 7.55 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 8.16 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 9.99 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 11.44 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 12.40 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 7.79 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 6.75 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 8.00 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 7.39 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 8.00 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 7.39 | HC |
| SRR1761528 | leaf | drought | 8.00 | HC |
| SRR1761529 | leaf | drought | 7.39 | HC |
| SRR504365 | leaf | wt | 16.74 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 5.20 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 5.41 | HC |
| SRR6417967 | leaf | H2O_control | 5.09 | HC |
| SRR6417968 | leaf | H2O_control | 4.53 | HC |
| SRR6417969 | leaf | H2O_control | 10.85 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 3.84 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 6.73 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 3.44 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 6.90 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 6.98 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 8.00 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 4.56 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 6.70 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 4.61 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 5.36 | HC |
| SRR8611900 | leaf | Non-inoculated | 19.49 | HC |
| SRR8611901 | leaf | Non-inoculated | 20.89 | HC |
| SRR8611902 | leaf | Non-inoculated | 19.27 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 27.44 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 29.81 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 30.70 | HC |
| SRR1213692 | leaf | wt | 15.32 | HC |
| SRR1213693 | leaf | wt | 24.40 | HC |
| SRR5856930 | leaf | salt | 2.08 | HC |
| SRR6168973 | leaf | none (control) | 5.59 | HC |
| SRR6168974 | leaf | none (control) | 5.29 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 48.61 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 8.83 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 46.33 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 17.15 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 15.38 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 20.85 | HC |
| SRR8582888 | panicle | AM | 7.72 | HC |
| SRR8582889 | panicle | AM | 7.12 | HC |
| SRR8582890 | panicle | AM | 3.15 | HC |
| SRR8582891 | panicle | PM | 19.61 | HC |
| SRR8582892 | panicle | PM | 18.64 | HC |
| SRR8582893 | panicle | PM | 24.55 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 2.60 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 3.35 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 12.61 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 11.08 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 10.20 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 11.36 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 9.08 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 15.72 | HC |
| SRR5126147 | root | "mock,1_day" | 7.97 | HC |
| SRR5126148 | root | "mock,1_day" | 9.48 | HC |
| SRR5126149 | root | "mock,1_day" | 9.72 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 9.98 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 8.47 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 10.30 | HC |
| SRR5126153 | root | "mock,7_days" | 7.94 | HC |
| SRR5126155 | root | "mock,7_days" | 9.27 | HC |
| SRR5126157 | root | "mock,7_days" | 8.43 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 7.10 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 7.49 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 8.82 | HC |
| SRR5126165 | root | "mock,14_days" | 9.83 | HC |
| SRR5126167 | root | "mock,14_days" | 8.34 | HC |
| SRR5126169 | root | "mock,14_days" | 8.70 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 5.56 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 6.51 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 7.49 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 5.67 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 5.78 | HC |
| SRR1213694 | root | wt | 5.45 | HC |
| SRR1213695 | root | wt | 13.03 | HC |
| SRR4947478 | root | control | 6.16 | HC |
| SRR4947482 | root | Al | 4.18 | HC |
| SRR4947490 | root | Al | 4.44 | HC |
| SRR4947506 | root | Al | 4.70 | HC |
| SRR1740434 | root_differentiation_zone | wt | 4.19 | HC |
| SRR1740435 | root_differentiation_zone | wt | 2.80 | HC |
| SRR1740436 | root_differentiation_zone | wt | 4.78 | HC |
| SRR1740431 | root_elongation_zone | wt | 7.16 | HC |
| SRR1740432 | root_elongation_zone | wt | 7.57 | HC |
| SRR1740433 | root_elongation_zone | wt | 8.12 | HC |
| SRR1740429 | root_meristematic_zone | wt | 3.75 | HC |
| SRR1740430 | root_meristematic_zone | wt | 6.69 | HC |
| SRR6441554 | seedling | wild_type | 11.77 | HC |
| SRR6441555 | seedling | wild_type | 10.95 | HC |
| SRR2154086 | seedling | wt | 11.69 | HC |
| SRR2154084 | seedling | wt | 6.12 | HC |
| SRR2154087 | seedling | wt | 8.29 | HC |
| SRR3098741 | seedling | wt | 9.75 | HC |
| SRR3098742 | seedling | wt | 7.23 | HC |
| SRR3098743 | seedling | wt | 7.70 | HC |
| SRR2857719 | seedling | drought_stress_0h | 7.61 | HC |
| SRR2857720 | seedling | drought_stress_1h | 4.73 | HC |
| SRR2857721 | seedling | drought_stress_6h | 5.84 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 14.73 | HC |
| SRR1944583 | seedling | no_treatment | 5.39 | HC |
| SRR358791 | seedling | wt | 10.51 | HC |
| SRR358792 | seedling | wt | 14.69 | HC |
| SRR358793 | seedling | wt | 19.58 | HC |
| SRR358794 | seedling | wt | 27.19 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 5.25 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 9.58 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 12.31 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 9.26 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 13.56 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 15.80 | HC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 10.18 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.90 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 13.79 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 11.25 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 5.06 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 5.56 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 6.84 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 7.63 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 14.15 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 14.64 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 6.76 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 11.95 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 13.14 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 8.56 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 13.99 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 10.32 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 3.76 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 3.50 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 3.93 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 5.23 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 6.63 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 5.49 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 7.18 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 5.96 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 9.48 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 8.95 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 4.08 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 3.50 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 4.78 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 3.71 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 6.91 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 5.47 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 16.27 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 15.24 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 14.33 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 11.02 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 8.88 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 9.80 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 7.51 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 14.43 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 11.23 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 15.33 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 14.86 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 12.99 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 12.44 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 8.28 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 8.30 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 11.18 | HC |