| SRR4457250 | 2nd_leaf | DAH4 | 5.77 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 4.42 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 5.03 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 4.50 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 6.10 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 5.18 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 5.46 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 6.39 | HC |
| SRR4457263 | 2nd_leaf | DAH36 | 6.31 | HC |
| SRR4457264 | 2nd_leaf | DAH44 | 7.15 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 9.40 | HC |
| SRR4457266 | 2nd_leaf | DAH44 | 7.53 | HC |
| SRR5560727 | caryopsis | wild_type | 6.60 | HC |
| SRR5560728 | caryopsis | wild_type | 5.88 | HC |
| SRR5560729 | caryopsis | wild_type | 5.61 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 5.31 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 6.55 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 4.52 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 7.90 | HC |
| SRR7265400 | coleoptile | 2dA | 5.12 | HC |
| SRR7265401 | coleoptile | 2dA | 4.50 | HC |
| SRR7265402 | coleoptile | 2dA | 4.24 | HC |
| SRR7265403 | coleoptile | 2dN | 5.57 | HC |
| SRR7265404 | coleoptile | 2dN | 5.16 | HC |
| SRR7265405 | coleoptile | 2dN | 4.61 | HC |
| SRR7265406 | coleoptile | 3dA | 3.82 | HC |
| SRR7265407 | coleoptile | 3dA | 3.77 | HC |
| SRR7265409 | coleoptile | 3dN | 4.94 | HC |
| SRR7265410 | coleoptile | 3dN | 4.24 | HC |
| SRR7265414 | coleoptile | 4dA | 7.07 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 4.45 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 4.72 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 5.60 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 8.13 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 9.79 | HC |
| SRR7265382 | embryo | 3hA | 5.59 | HC |
| SRR7265384 | embryo | 3hA | 4.53 | HC |
| SRR7265388 | embryo | 12hA | 9.67 | HC |
| SRR7265389 | embryo | 12hA | 8.34 | HC |
| SRR7265390 | embryo | 12hA | 8.50 | HC |
| SRR7265391 | embryo | 12hN | 8.65 | HC |
| SRR7265392 | embryo | 12hN | 7.07 | HC |
| SRR7265393 | embryo | 12hN | 7.97 | HC |
| SRR7265394 | embryo | 24hA | 6.76 | HC |
| SRR7265395 | embryo | 24hA | 8.20 | HC |
| SRR7265396 | embryo | 24hA | 5.26 | HC |
| SRR7265397 | embryo | 24hN | 6.40 | HC |
| SRR7265398 | embryo | 24hN | 6.84 | HC |
| SRR7265399 | embryo | 24hN | 6.94 | HC |
| SRR2338867 | endosprem | control | 3.22 | HC |
| SRR2338868 | endosprem | high_temperature | 4.59 | HC |
| SRR4457232 | flag_leaf | DAH4 | 3.44 | HC |
| SRR4457233 | flag_leaf | DAH4 | 4.56 | HC |
| SRR4457234 | flag_leaf | DAH12 | 3.98 | HC |
| SRR4457235 | flag_leaf | DAH12 | 3.89 | HC |
| SRR4457236 | flag_leaf | DAH12 | 4.83 | HC |
| SRR4457237 | flag_leaf | DAH20 | 4.42 | HC |
| SRR4457238 | flag_leaf | DAH20 | 5.50 | HC |
| SRR4457239 | flag_leaf | DAH20 | 5.22 | HC |
| SRR4457240 | flag_leaf | DAH28 | 8.82 | HC |
| SRR4457241 | flag_leaf | DAH28 | 6.88 | HC |
| SRR4457242 | flag_leaf | DAH28 | 4.87 | HC |
| SRR4457246 | flag_leaf | DAH44 | 6.00 | HC |
| SRR1213690 | flower | wt(flower buds) | 7.00 | HC |
| SRR1213691 | flower | wt | 6.33 | HC |
| SRR8240824 | leaf | wild_type | 5.43 | HC |
| SRR8240825 | leaf | wild_type | 3.42 | HC |
| SRR8240826 | leaf | wild_type | 5.51 | HC |
| SRR8240818 | leaf | wild_type | 3.64 | HC |
| SRR8240819 | leaf | wild_type | 6.77 | HC |
| SRR8240820 | leaf | wild_type | 8.00 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 4.77 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 5.87 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 7.09 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 5.66 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 6.49 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 20.28 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 14.88 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 15.55 | HC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 14.48 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 12.42 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 9.21 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 12.52 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 11.45 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 12.50 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 12.94 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 13.84 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 12.81 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 16.06 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 7.35 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 12.59 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 7.68 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 9.15 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 11.26 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 10.36 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 8.11 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 13.16 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 14.60 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 11.11 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 13.18 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 11.91 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 16.60 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 14.59 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 14.83 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 8.88 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 11.44 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 7.61 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 9.88 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 7.88 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 8.47 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 9.59 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 6.78 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 6.73 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 7.21 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 9.63 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 6.77 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 6.70 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 7.25 | HC |
| SRR1761528 | leaf | drought | 9.66 | HC |
| SRR1761529 | leaf | drought | 6.71 | HC |
| SRR1761530 | leaf | control | 6.74 | HC |
| SRR1761531 | leaf | control | 7.32 | HC |
| SRR504365 | leaf | wt | 8.21 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 9.41 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 5.30 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 5.45 | HC |
| SRR6417967 | leaf | H2O_control | 6.76 | HC |
| SRR6417968 | leaf | H2O_control | 6.65 | HC |
| SRR6417969 | leaf | H2O_control | 7.38 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 4.37 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 5.72 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 4.41 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 5.94 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 5.17 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 6.38 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 3.82 | HC |
| SRR8611900 | leaf | Non-inoculated | 6.26 | HC |
| SRR8611901 | leaf | Non-inoculated | 4.91 | HC |
| SRR8611902 | leaf | Non-inoculated | 5.45 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 5.36 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 5.08 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 6.85 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 9.30 | HC |
| SRR1213692 | leaf | wt | 6.29 | HC |
| SRR1213693 | leaf | wt | 6.10 | HC |
| SRR5856927 | leaf | control | 2.67 | HC |
| SRR5856928 | leaf | control | 2.58 | HC |
| SRR5856929 | leaf | control | 4.06 | HC |
| SRR5856930 | leaf | salt | 2.82 | HC |
| SRR5856932 | leaf | salt | 2.04 | HC |
| SRR5856933 | leaf | control | 4.38 | HC |
| SRR5856934 | leaf | control | 3.91 | HC |
| SRR5856936 | leaf | salt | 2.79 | HC |
| SRR5856937 | leaf | salt | 3.00 | HC |
| SRR6168975 | leaf | none (control) | 5.32 | HC |
| SRR6168979 | leaf | none (control) | 2.05 | HC |
| SRR6168980 | leaf | none (control) | 2.27 | HC |
| SRR6168981 | leaf | none (control) | 5.82 | HC |
| SRR8582889 | panicle | AM | 2.06 | HC |
| SRR8582890 | panicle | AM | 2.94 | HC |
| SRR8582892 | panicle | PM | 8.16 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 3.44 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 2.89 | HC |
| SRR1633182 | panicle | WT | 16.00 | HC |
| SRR1633185 | panicle | WT | 26.27 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 4.17 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 5.82 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 7.49 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 6.07 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 8.09 | HC |
| SRR5126147 | root | "mock,1_day" | 11.80 | HC |
| SRR5126148 | root | "mock,1_day" | 13.39 | HC |
| SRR5126149 | root | "mock,1_day" | 17.58 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 16.96 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 16.65 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 18.20 | HC |
| SRR5126153 | root | "mock,7_days" | 9.73 | HC |
| SRR5126155 | root | "mock,7_days" | 11.88 | HC |
| SRR5126157 | root | "mock,7_days" | 13.92 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 14.74 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 12.47 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 11.44 | HC |
| SRR5126165 | root | "mock,14_days" | 12.22 | HC |
| SRR5126167 | root | "mock,14_days" | 10.99 | HC |
| SRR5126169 | root | "mock,14_days" | 13.07 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 12.58 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 12.41 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 11.81 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 10.32 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 6.54 | HC |
| SRR1213694 | root | wt | 8.33 | HC |
| SRR1213695 | root | wt | 5.66 | HC |
| SRR4947482 | root | Al | 6.42 | HC |
| SRR1740434 | root_differentiation_zone | wt | 9.74 | HC |
| SRR1740435 | root_differentiation_zone | wt | 6.21 | HC |
| SRR1740436 | root_differentiation_zone | wt | 12.77 | HC |
| SRR1740431 | root_elongation_zone | wt | 10.24 | HC |
| SRR1740432 | root_elongation_zone | wt | 20.14 | HC |
| SRR1740433 | root_elongation_zone | wt | 15.57 | HC |
| SRR1740428 | root_meristematic_zone | wt | 6.62 | HC |
| SRR1740429 | root_meristematic_zone | wt | 11.23 | HC |
| SRR1740430 | root_meristematic_zone | wt | 14.77 | HC |
| SRR6441555 | seedling | wild_type | 4.06 | HC |
| SRR2154086 | seedling | wt | 12.65 | HC |
| SRR2154085 | seedling | wt | 12.24 | HC |
| SRR2154087 | seedling | wt | 12.84 | HC |
| SRR3098741 | seedling | wt | 3.52 | HC |
| SRR3098742 | seedling | wt | 3.16 | HC |
| SRR3098743 | seedling | wt | 3.03 | HC |
| SRR2857719 | seedling | drought_stress_0h | 8.39 | HC |
| SRR2857720 | seedling | drought_stress_1h | 7.50 | HC |
| SRR2857721 | seedling | drought_stress_6h | 6.97 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 4.92 | HC |
| SRR1944583 | seedling | no_treatment | 5.20 | HC |
| SRR358791 | seedling | wt | 10.78 | HC |
| SRR358792 | seedling | wt | 12.68 | HC |
| SRR358793 | seedling | wt | 11.02 | HC |
| SRR358794 | seedling | wt | 10.18 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 6.55 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 10.69 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 11.22 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 11.73 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 9.13 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 13.16 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 11.40 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 8.34 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 10.40 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 11.51 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 5.39 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 8.37 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 11.87 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 4.03 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 4.88 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 3.30 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 4.59 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.99 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 5.61 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 7.09 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 3.30 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 3.47 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 3.35 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 5.19 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 4.54 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 9.09 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 7.29 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 7.51 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 10.74 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 13.96 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 9.49 | HC |