| SRR4457249 | 2nd_leaf | DAH4 | 39.51 | HC |
| SRR4457250 | 2nd_leaf | DAH4 | 27.15 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 32.49 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 26.23 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 24.67 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 21.43 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 37.54 | HC |
| SRR4457256 | 2nd_leaf | DAH20 | 44.68 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 30.33 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 46.62 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 43.86 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 64.61 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 45.12 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 24.56 | HC |
| SRR4457263 | 2nd_leaf | DAH36 | 30.29 | HC |
| SRR4457264 | 2nd_leaf | DAH44 | 78.37 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 115.22 | HC |
| SRR4457266 | 2nd_leaf | DAH44 | 76.96 | HC |
| SRR3745125 | anther | wt | 59.48 | HC |
| SRR3745126 | anther | wt | 56.47 | HC |
| SRR3745127 | anther | wt | 54.80 | HC |
| SRR358795 | callus | wt | 23.90 | HC |
| SRR358796 | callus | wt | 27.55 | HC |
| SRR358797 | callus | wt | 24.00 | HC |
| SRR358798 | callus | wt | 21.71 | HC |
| SRR6320473 | carpel | wt | 45.69 | HC |
| SRR6320498 | carpel | wt | 38.95 | HC |
| SRR5560727 | caryopsis | wild_type | 80.09 | HC |
| SRR5560728 | caryopsis | wild_type | 64.26 | HC |
| SRR5560729 | caryopsis | wild_type | 62.16 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 21.50 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 25.73 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 23.23 | HC |
| SRR4947495 | root | control | 26.36 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 15.15 | HC |
| SRR7265400 | coleoptile | 2dA | 16.09 | HC |
| SRR7265401 | coleoptile | 2dA | 17.69 | HC |
| SRR7265402 | coleoptile | 2dA | 16.45 | HC |
| SRR7265403 | coleoptile | 2dN | 31.58 | HC |
| SRR7265404 | coleoptile | 2dN | 31.57 | HC |
| SRR7265405 | coleoptile | 2dN | 27.55 | HC |
| SRR7265406 | coleoptile | 3dA | 14.38 | HC |
| SRR7265407 | coleoptile | 3dA | 13.22 | HC |
| SRR7265408 | coleoptile | 3dA | 9.97 | HC |
| SRR7265409 | coleoptile | 3dN | 21.48 | HC |
| SRR7265410 | coleoptile | 3dN | 19.72 | HC |
| SRR7265411 | coleoptile | 3dN | 19.96 | HC |
| SRR7265412 | coleoptile | 4dA | 13.03 | HC |
| SRR7265413 | coleoptile | 4dA | 25.12 | HC |
| SRR7265414 | coleoptile | 4dA | 18.79 | HC |
| SRR7265415 | coleoptile | 4dN | 30.65 | HC |
| SRR7265416 | coleoptile | 4dN | 26.60 | HC |
| SRR7265417 | coleoptile | 4dN | 25.96 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 9.92 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 11.10 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 10.55 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 49.40 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 79.65 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 42.67 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 36.04 | HC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 62.57 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 38.36 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 57.41 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 30.78 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 48.38 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 46.83 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 42.10 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 48.18 | HC |
| SRR7265373 | embryo | dry seed 0 h | 28.32 | HC |
| SRR7265374 | embryo | dry seed 0 h | 26.64 | HC |
| SRR7265375 | embryo | dry seed 0 h | 10.38 | HC |
| SRR7265376 | embryo | 1hA | 26.83 | HC |
| SRR7265377 | embryo | 1hA | 28.99 | HC |
| SRR7265378 | embryo | 1hA | 28.71 | HC |
| SRR7265379 | embryo | 1hN | 27.71 | HC |
| SRR7265380 | embryo | 1hN | 26.20 | HC |
| SRR7265381 | embryo | 1hN | 26.25 | HC |
| SRR7265382 | embryo | 3hA | 25.32 | HC |
| SRR7265383 | embryo | 3hA | 27.64 | HC |
| SRR7265384 | embryo | 3hA | 26.51 | HC |
| SRR7265385 | embryo | 3hN | 28.09 | HC |
| SRR7265386 | embryo | 3hN | 25.83 | HC |
| SRR7265387 | embryo | 3hN | 25.86 | HC |
| SRR7265388 | embryo | 12hA | 27.35 | HC |
| SRR7265389 | embryo | 12hA | 25.96 | HC |
| SRR7265390 | embryo | 12hA | 29.22 | HC |
| SRR7265391 | embryo | 12hN | 38.70 | HC |
| SRR7265392 | embryo | 12hN | 33.64 | HC |
| SRR7265393 | embryo | 12hN | 36.62 | HC |
| SRR7265394 | embryo | 24hA | 21.39 | HC |
| SRR7265395 | embryo | 24hA | 23.43 | HC |
| SRR7265396 | embryo | 24hA | 22.71 | HC |
| SRR7265397 | embryo | 24hN | 37.31 | HC |
| SRR7265398 | embryo | 24hN | 36.16 | HC |
| SRR7265399 | embryo | 24hN | 35.74 | HC |
| SRR2338866 | endosprem | control | 11.56 | HC |
| SRR2338867 | endosprem | control | 6.27 | HC |
| SRR2338868 | endosprem | high_temperature | 16.94 | HC |
| SRR2338869 | endosprem | high_temperature | 25.21 | HC |
| SRR4457231 | flag_leaf | DAH4 | 22.66 | HC |
| SRR4457232 | flag_leaf | DAH4 | 20.27 | HC |
| SRR4457233 | flag_leaf | DAH4 | 18.44 | HC |
| SRR4457234 | flag_leaf | DAH12 | 14.13 | HC |
| SRR4457235 | flag_leaf | DAH12 | 12.60 | HC |
| SRR4457236 | flag_leaf | DAH12 | 10.61 | HC |
| SRR4457237 | flag_leaf | DAH20 | 17.27 | HC |
| SRR4457238 | flag_leaf | DAH20 | 17.98 | HC |
| SRR4457239 | flag_leaf | DAH20 | 16.15 | HC |
| SRR4457240 | flag_leaf | DAH28 | 29.61 | HC |
| SRR4457241 | flag_leaf | DAH28 | 22.83 | HC |
| SRR4457242 | flag_leaf | DAH28 | 30.57 | HC |
| SRR4457243 | flag_leaf | DAH36 | 24.29 | HC |
| SRR4457244 | flag_leaf | DAH36 | 16.06 | HC |
| SRR4457245 | flag_leaf | DAH36 | 20.17 | HC |
| SRR4457246 | flag_leaf | DAH44 | 59.97 | HC |
| SRR4457247 | flag_leaf | DAH44 | 57.40 | HC |
| SRR4457248 | flag_leaf | DAH44 | 60.74 | HC |
| SRR1213690 | flower | wt(flower buds) | 37.40 | HC |
| SRR1213691 | flower | wt | 29.85 | HC |
| SRR8060835 | leaf | wild_type | 45.07 | HC |
| SRR8060836 | leaf | wild_type | 25.57 | HC |
| SRR8060837 | leaf | wild_type | 43.99 | HC |
| SRR8240824 | leaf | wild_type | 13.24 | HC |
| SRR8240825 | leaf | wild_type | 13.39 | HC |
| SRR8240826 | leaf | wild_type | 8.93 | HC |
| SRR8240818 | leaf | wild_type | 11.02 | HC |
| SRR8240819 | leaf | wild_type | 14.08 | HC |
| SRR8240820 | leaf | wild_type | 15.28 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 21.19 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 21.47 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 15.36 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 19.85 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 24.33 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 27.62 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 35.29 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 30.43 | HC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 28.74 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 34.76 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 31.06 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 34.34 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 34.89 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 29.07 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 26.01 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 33.80 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 37.14 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 32.32 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 37.09 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 26.23 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 27.16 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 28.79 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 28.79 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 32.64 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 32.19 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 28.06 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 25.50 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 35.19 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 28.35 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 31.15 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 36.12 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 32.23 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 30.90 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 34.41 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 29.08 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 30.07 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 30.27 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 22.67 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 22.38 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 24.25 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 31.97 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 36.15 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 17.21 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 17.97 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 31.93 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 36.10 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 17.15 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 18.05 | HC |
| SRR1761528 | leaf | drought | 31.97 | HC |
| SRR1761529 | leaf | drought | 36.12 | HC |
| SRR1761530 | leaf | control | 17.19 | HC |
| SRR1761531 | leaf | control | 18.03 | HC |
| SRR504365 | leaf | wt | 63.94 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 15.40 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 17.97 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 13.35 | HC |
| SRR6417967 | leaf | H2O_control | 12.32 | HC |
| SRR6417968 | leaf | H2O_control | 12.72 | HC |
| SRR6417969 | leaf | H2O_control | 11.27 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 10.03 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 10.37 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 15.13 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 18.36 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 13.81 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 20.39 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 16.42 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 20.59 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 10.44 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 20.54 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 16.53 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 19.27 | HC |
| SRR8611900 | leaf | Non-inoculated | 117.29 | HC |
| SRR8611901 | leaf | Non-inoculated | 113.35 | HC |
| SRR8611902 | leaf | Non-inoculated | 111.08 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 224.95 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 209.99 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 222.20 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 34.12 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 38.01 | HC |
| SRR1213692 | leaf | wt | 36.00 | HC |
| SRR1213693 | leaf | wt | 43.84 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 24.64 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 26.44 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 17.79 | HC |
| SRR6502088 | leaf | control | 15.42 | HC |
| SRR6502089 | leaf | control | 17.72 | HC |
| SRR6502090 | leaf | control | 15.28 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 15.66 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 15.87 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 18.14 | HC |
| SRR6502100 | leaf | control | 15.31 | HC |
| SRR6502101 | leaf | control | 10.57 | HC |
| SRR6502102 | leaf | control | 10.77 | HC |
| SRR5856927 | leaf | control | 19.45 | HC |
| SRR5856928 | leaf | control | 19.73 | HC |
| SRR5856929 | leaf | control | 18.83 | HC |
| SRR5856930 | leaf | salt | 25.63 | HC |
| SRR5856931 | leaf | salt | 22.54 | HC |
| SRR5856932 | leaf | salt | 24.30 | HC |
| SRR5856933 | leaf | control | 21.39 | HC |
| SRR5856934 | leaf | control | 19.87 | HC |
| SRR5856935 | leaf | control | 26.09 | HC |
| SRR5856936 | leaf | salt | 20.41 | HC |
| SRR5856937 | leaf | salt | 20.09 | HC |
| SRR5856938 | leaf | salt | 20.92 | HC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 25.17 | HC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 26.09 | HC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 19.10 | HC |
| SRR6053395 | leaf | gibberellic acid (GA) | 47.17 | HC |
| SRR6053396 | leaf | gibberellic acid (GA) | 43.58 | HC |
| SRR6053397 | leaf | gibberellic acid (GA) | 37.31 | HC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 28.33 | HC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 15.21 | HC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 23.55 | HC |
| SRR6168973 | leaf | none (control) | 124.83 | HC |
| SRR6168974 | leaf | none (control) | 119.09 | HC |
| SRR6168975 | leaf | none (control) | 163.88 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 210.38 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 40.51 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 186.72 | HC |
| SRR6168979 | leaf | none (control) | 44.88 | HC |
| SRR6168980 | leaf | none (control) | 33.62 | HC |
| SRR6168981 | leaf | none (control) | 56.56 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 53.73 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 91.97 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 89.11 | HC |
| SRR8582888 | panicle | AM | 6.65 | HC |
| SRR8582889 | panicle | AM | 4.79 | HC |
| SRR8582890 | panicle | AM | 6.69 | HC |
| SRR8582891 | panicle | PM | 61.27 | HC |
| SRR8582892 | panicle | PM | 55.26 | HC |
| SRR8582893 | panicle | PM | 61.29 | HC |
| SRR5110429 | panicle | Dawn | 47.14 | HC |
| SRR5110430 | panicle | Dawn | 52.45 | HC |
| SRR5110431 | panicle | Dawn | 48.65 | HC |
| SRR5110432 | panicle | Dawn | 28.79 | HC |
| SRR4947496 | root | control | 27.95 | HC |
| SRR5110433 | panicle | Dawn + 3.5h | 34.60 | HC |
| SRR5110434 | panicle | Dawn + 3.5h | 35.91 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 28.56 | HC |
| SRR5110436 | panicle | Dawn + 3.5h | 26.16 | HC |
| SRR5110437 | panicle | Dawn + 7h | 36.93 | HC |
| SRR5110438 | panicle | Dawn + 7h | 41.36 | HC |
| SRR5110439 | panicle | Dawn + 7h | 43.92 | HC |
| SRR5110440 | panicle | Dawn + 7h | 40.98 | HC |
| SRR5110441 | panicle | Dawn + 10.5h | 47.70 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 46.01 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 37.97 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 43.06 | HC |
| SRR5110445 | panicle | Dusk | 61.96 | HC |
| SRR5110446 | panicle | Dusk | 45.04 | HC |
| SRR5110447 | panicle | Dusk | 49.91 | HC |
| SRR5110448 | panicle | Dusk | 45.08 | HC |
| SRR5110449 | panicle | Dawn + 14h | 54.14 | HC |
| SRR5110450 | panicle | Dawn + 14h | 43.49 | HC |
| SRR5110451 | panicle | Dawn + 14h | 64.71 | HC |
| SRR5110452 | panicle | Dawn + 14h | 46.04 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 35.09 | HC |
| SRR5110454 | panicle | Dawn + 17.5h | 35.27 | HC |
| SRR5110455 | panicle | Dawn + 17.5h | 39.18 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 34.35 | HC |
| SRR5110457 | panicle | Dawn + 21h | 27.31 | HC |
| SRR5110458 | panicle | Dawn + 21h | 26.91 | HC |
| SRR5110459 | panicle | Dawn + 21h | 29.61 | HC |
| SRR5110460 | panicle | Dawn + 21h | 33.60 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 19.63 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 27.94 | HC |
| SRR1633182 | panicle | WT | 10.89 | HC |
| SRR1633185 | panicle | WT | 14.33 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 12.46 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 12.29 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 18.67 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 17.98 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 31.68 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 47.57 | HC |
| SRR5126147 | root | "mock,1_day" | 43.22 | HC |
| SRR5126148 | root | "mock,1_day" | 47.05 | HC |
| SRR5126149 | root | "mock,1_day" | 51.40 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 51.80 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 50.04 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 31.73 | HC |
| SRR5126153 | root | "mock,7_days" | 44.40 | HC |
| SRR5126155 | root | "mock,7_days" | 69.70 | HC |
| SRR5126157 | root | "mock,7_days" | 68.38 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 78.27 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 61.59 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 76.70 | HC |
| SRR5126165 | root | "mock,14_days" | 50.40 | HC |
| SRR5126167 | root | "mock,14_days" | 46.05 | HC |
| SRR5126169 | root | "mock,14_days" | 76.64 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 89.77 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 67.50 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 94.84 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 35.28 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 26.86 | HC |
| SRR1213694 | root | wt | 32.55 | HC |
| SRR1213695 | root | wt | 45.49 | HC |
| SRR4947478 | root | control | 22.94 | HC |
| SRR4947479 | root | control | 26.28 | HC |
| SRR4947480 | root | control | 26.58 | HC |
| SRR4947481 | root | control | 32.99 | HC |
| SRR4947482 | root | Al | 17.72 | HC |
| SRR4947483 | root | Al | 26.23 | HC |
| SRR4947484 | root | Al | 23.86 | HC |
| SRR4947485 | root | Al | 34.54 | HC |
| SRR4947487 | root | control | 23.95 | HC |
| SRR4947488 | root | control | 21.98 | HC |
| SRR4947489 | root | control | 27.45 | HC |
| SRR4947490 | root | Al | 28.34 | HC |
| SRR4947491 | root | Al | 37.05 | HC |
| SRR4947492 | root | Al | 27.84 | HC |
| SRR4947493 | root | Al | 25.51 | HC |
| SRR4947494 | root | control | 23.87 | HC |
| SRR4947497 | root | control | 31.62 | HC |
| SRR4947498 | root | Al | 32.16 | HC |
| SRR4947499 | root | Al | 30.48 | HC |
| SRR4947500 | root | Al | 25.70 | HC |
| SRR4947501 | root | Al | 33.66 | HC |
| SRR4947502 | root | control | 28.87 | HC |
| SRR4947503 | root | control | 23.19 | HC |
| SRR4947504 | root | control | 21.96 | HC |
| SRR4947505 | root | control | 29.43 | HC |
| SRR4947506 | root | Al | 20.97 | HC |
| SRR4947507 | root | Al | 34.80 | HC |
| SRR4947508 | root | Al | 23.10 | HC |
| SRR4947509 | root | Al | 22.46 | HC |
| SRR6502091 | root | 100 mM NaCl | 35.03 | HC |
| SRR6502092 | root | 100 mM NaCl | 37.78 | HC |
| SRR6502093 | root | 100 mM NaCl | 31.93 | HC |
| SRR6502094 | root | control | 40.97 | HC |
| SRR6502095 | root | control | 38.71 | HC |
| SRR6502096 | root | control | 30.97 | HC |
| SRR6502103 | root | 100 mM NaCl | 28.44 | HC |
| SRR6502104 | root | 100 mM NaCl | 29.19 | HC |
| SRR6502105 | root | 100 mM NaCl | 54.33 | HC |
| SRR6502106 | root | control | 29.86 | HC |
| SRR6502107 | root | control | 25.81 | HC |
| SRR6502108 | root | control | 28.30 | HC |
| SRR1740434 | root_differentiation_zone | wt | 23.20 | HC |
| SRR1740435 | root_differentiation_zone | wt | 13.09 | HC |
| SRR1740436 | root_differentiation_zone | wt | 29.87 | HC |
| SRR1740431 | root_elongation_zone | wt | 29.74 | HC |
| SRR1740432 | root_elongation_zone | wt | 53.47 | HC |
| SRR1740433 | root_elongation_zone | wt | 46.94 | HC |
| SRR1740428 | root_meristematic_zone | wt | 28.36 | HC |
| SRR1740429 | root_meristematic_zone | wt | 37.16 | HC |
| SRR1740430 | root_meristematic_zone | wt | 56.93 | HC |
| SRR6441554 | seedling | wild_type | 29.39 | HC |
| SRR6441555 | seedling | wild_type | 36.15 | HC |
| SRR2154086 | seedling | wt | 20.27 | HC |
| SRR2154082 | seedling | wt | 34.38 | HC |
| SRR2154083 | seedling | wt | 20.96 | HC |
| SRR2154084 | seedling | wt | 23.80 | HC |
| SRR2154085 | seedling | wt | 19.19 | HC |
| SRR2154087 | seedling | wt | 15.48 | HC |
| SRR3098741 | seedling | wt | 29.89 | HC |
| SRR3098742 | seedling | wt | 27.18 | HC |
| SRR3098743 | seedling | wt | 31.73 | HC |
| SRR2857719 | seedling | drought_stress_0h | 33.23 | HC |
| SRR2857720 | seedling | drought_stress_1h | 32.97 | HC |
| SRR2857721 | seedling | drought_stress_6h | 24.31 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 72.52 | HC |
| SRR1944583 | seedling | no_treatment | 17.85 | HC |
| SRR358791 | seedling | wt | 25.42 | HC |
| SRR358792 | seedling | wt | 22.17 | HC |
| SRR358793 | seedling | wt | 34.76 | HC |
| SRR358794 | seedling | wt | 37.41 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 10.34 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 11.00 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 9.87 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 13.06 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 15.56 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 14.64 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 14.71 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 9.26 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 31.12 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 38.86 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 39.91 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 29.16 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 46.44 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 50.64 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 28.19 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 38.87 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 44.91 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 19.39 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 35.66 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 38.03 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 13.65 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 12.07 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 15.56 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 15.26 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 17.14 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 19.19 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 17.12 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 19.03 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 20.04 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 19.37 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 13.15 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 11.37 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 13.44 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 13.42 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 11.92 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 15.32 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 15.95 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 21.07 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 19.97 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 12.04 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 43.23 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 41.99 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 47.32 | HC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 22.16 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 47.70 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 34.08 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 29.92 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 37.41 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 32.02 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 31.29 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 40.72 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 34.54 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 37.84 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 41.11 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 54.34 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 33.65 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 32.04 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 34.12 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 34.58 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 50.43 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 30.04 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 33.43 | HC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 32.08 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 46.16 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 50.74 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 39.84 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 56.04 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 39.06 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 46.87 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 46.47 | HC |
| SRR1617559 | shoot_apical_meristem | no collect | 42.62 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 19.20 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 18.63 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 18.58 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 18.42 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 16.74 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 18.58 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 35.69 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 40.36 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 41.94 | HC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 29.84 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 36.70 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 23.70 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 23.58 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 32.25 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 29.65 | HC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 22.86 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 32.71 | HC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 25.14 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 31.18 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 28.04 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 27.04 | HC |