| SRR4457249 | 2nd_leaf | DAH4 | 128.98 | HC |
| SRR4457250 | 2nd_leaf | DAH4 | 117.66 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 110.33 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 107.19 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 109.67 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 92.15 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 116.51 | HC |
| SRR4457256 | 2nd_leaf | DAH20 | 116.09 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 116.87 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 123.47 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 109.34 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 98.84 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 119.30 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 112.20 | HC |
| SRR4457263 | 2nd_leaf | DAH36 | 54.38 | HC |
| SRR4457264 | 2nd_leaf | DAH44 | 123.19 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 94.98 | HC |
| SRR4457266 | 2nd_leaf | DAH44 | 142.90 | HC |
| SRR3745125 | anther | wt | 7.75 | HC |
| SRR3745126 | anther | wt | 8.05 | HC |
| SRR3745127 | anther | wt | 7.85 | HC |
| SRR358795 | callus | wt | 172.38 | HC |
| SRR358796 | callus | wt | 162.10 | HC |
| SRR358797 | callus | wt | 180.80 | HC |
| SRR358798 | callus | wt | 174.75 | HC |
| SRR6320473 | carpel | wt | 115.20 | HC |
| SRR6320498 | carpel | wt | 112.17 | HC |
| SRR5560727 | caryopsis | wild_type | 256.76 | HC |
| SRR5560728 | caryopsis | wild_type | 270.73 | HC |
| SRR5560729 | caryopsis | wild_type | 224.48 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 70.41 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 73.75 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 46.41 | HC |
| SRR4947495 | root | control | 118.17 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 38.68 | HC |
| SRR7265400 | coleoptile | 2dA | 16.10 | HC |
| SRR7265401 | coleoptile | 2dA | 14.99 | HC |
| SRR7265402 | coleoptile | 2dA | 16.01 | HC |
| SRR7265403 | coleoptile | 2dN | 23.99 | HC |
| SRR7265404 | coleoptile | 2dN | 22.67 | HC |
| SRR7265405 | coleoptile | 2dN | 24.04 | HC |
| SRR7265406 | coleoptile | 3dA | 11.99 | HC |
| SRR7265407 | coleoptile | 3dA | 11.31 | HC |
| SRR7265408 | coleoptile | 3dA | 8.33 | HC |
| SRR7265409 | coleoptile | 3dN | 16.58 | HC |
| SRR7265410 | coleoptile | 3dN | 15.93 | HC |
| SRR7265411 | coleoptile | 3dN | 14.17 | HC |
| SRR7265412 | coleoptile | 4dA | 13.29 | HC |
| SRR7265413 | coleoptile | 4dA | 25.31 | HC |
| SRR7265414 | coleoptile | 4dA | 23.29 | HC |
| SRR7265415 | coleoptile | 4dN | 16.54 | HC |
| SRR7265416 | coleoptile | 4dN | 15.63 | HC |
| SRR7265417 | coleoptile | 4dN | 15.43 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 16.22 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 13.89 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 17.02 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 121.85 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 115.29 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 12.84 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 116.04 | HC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 112.99 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 14.80 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 134.62 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 135.22 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 9.32 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 89.46 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 114.47 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 10.30 | HC |
| SRR7265373 | embryo | dry seed 0 h | 29.21 | HC |
| SRR7265374 | embryo | dry seed 0 h | 33.63 | HC |
| SRR7265375 | embryo | dry seed 0 h | 14.26 | HC |
| SRR7265376 | embryo | 1hA | 21.06 | HC |
| SRR7265377 | embryo | 1hA | 21.92 | HC |
| SRR7265378 | embryo | 1hA | 23.03 | HC |
| SRR7265379 | embryo | 1hN | 26.16 | HC |
| SRR7265380 | embryo | 1hN | 25.03 | HC |
| SRR7265381 | embryo | 1hN | 24.96 | HC |
| SRR7265382 | embryo | 3hA | 15.78 | HC |
| SRR7265383 | embryo | 3hA | 16.37 | HC |
| SRR7265384 | embryo | 3hA | 16.55 | HC |
| SRR7265385 | embryo | 3hN | 19.82 | HC |
| SRR7265386 | embryo | 3hN | 17.01 | HC |
| SRR7265387 | embryo | 3hN | 16.90 | HC |
| SRR7265388 | embryo | 12hA | 34.27 | HC |
| SRR7265389 | embryo | 12hA | 30.56 | HC |
| SRR7265390 | embryo | 12hA | 30.56 | HC |
| SRR7265391 | embryo | 12hN | 31.42 | HC |
| SRR7265392 | embryo | 12hN | 28.98 | HC |
| SRR7265393 | embryo | 12hN | 30.86 | HC |
| SRR7265394 | embryo | 24hA | 22.49 | HC |
| SRR7265395 | embryo | 24hA | 28.68 | HC |
| SRR7265396 | embryo | 24hA | 25.58 | HC |
| SRR7265397 | embryo | 24hN | 32.47 | HC |
| SRR7265398 | embryo | 24hN | 30.36 | HC |
| SRR7265399 | embryo | 24hN | 30.77 | HC |
| SRR2338866 | endosprem | control | 33.66 | HC |
| SRR2338867 | endosprem | control | 20.84 | HC |
| SRR2338868 | endosprem | high_temperature | 23.99 | HC |
| SRR2338869 | endosprem | high_temperature | 26.99 | HC |
| SRR976168 | flag_leaf | wild_type | 61.54 | HC |
| SRR4457231 | flag_leaf | DAH4 | 73.64 | HC |
| SRR4457232 | flag_leaf | DAH4 | 93.34 | HC |
| SRR4457233 | flag_leaf | DAH4 | 94.74 | HC |
| SRR4457234 | flag_leaf | DAH12 | 61.92 | HC |
| SRR4457235 | flag_leaf | DAH12 | 67.00 | HC |
| SRR4457236 | flag_leaf | DAH12 | 63.24 | HC |
| SRR4457237 | flag_leaf | DAH20 | 60.70 | HC |
| SRR4457238 | flag_leaf | DAH20 | 63.59 | HC |
| SRR4457239 | flag_leaf | DAH20 | 68.99 | HC |
| SRR4457240 | flag_leaf | DAH28 | 79.52 | HC |
| SRR4457241 | flag_leaf | DAH28 | 73.01 | HC |
| SRR4457242 | flag_leaf | DAH28 | 80.72 | HC |
| SRR4457243 | flag_leaf | DAH36 | 103.63 | HC |
| SRR4457244 | flag_leaf | DAH36 | 76.10 | HC |
| SRR4457245 | flag_leaf | DAH36 | 88.65 | HC |
| SRR4457246 | flag_leaf | DAH44 | 126.41 | HC |
| SRR4457247 | flag_leaf | DAH44 | 115.69 | HC |
| SRR4457248 | flag_leaf | DAH44 | 122.61 | HC |
| SRR1213690 | flower | wt(flower buds) | 68.22 | HC |
| SRR1213691 | flower | wt | 64.98 | HC |
| SRR8060835 | leaf | wild_type | 172.28 | HC |
| SRR8060836 | leaf | wild_type | 93.22 | HC |
| SRR8060837 | leaf | wild_type | 162.53 | HC |
| SRR8240824 | leaf | wild_type | 45.63 | HC |
| SRR8240825 | leaf | wild_type | 35.75 | HC |
| SRR8240826 | leaf | wild_type | 28.59 | HC |
| SRR8240818 | leaf | wild_type | 18.72 | HC |
| SRR8240819 | leaf | wild_type | 26.78 | HC |
| SRR8240820 | leaf | wild_type | 34.61 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 55.91 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 66.40 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 42.15 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 47.42 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 139.41 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 115.03 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 126.17 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 123.52 | HC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 96.55 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 111.08 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 121.72 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 104.21 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 114.05 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 161.50 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 89.73 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 132.25 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 116.83 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 103.14 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 111.84 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 93.58 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 84.81 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 107.77 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 114.83 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 106.46 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 120.38 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 162.33 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 107.34 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 109.50 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 144.36 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 93.11 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 99.65 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 132.71 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 121.94 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 110.59 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 120.28 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 99.51 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 100.06 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 149.70 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 98.00 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 124.14 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 69.24 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 64.12 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 81.01 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 71.60 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 69.23 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 64.12 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 81.01 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 71.60 | HC |
| SRR1761528 | leaf | drought | 69.24 | HC |
| SRR1761529 | leaf | drought | 64.12 | HC |
| SRR1761530 | leaf | control | 81.01 | HC |
| SRR1761531 | leaf | control | 71.60 | HC |
| SRR504365 | leaf | wt | 182.87 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 38.51 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 35.51 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 33.24 | HC |
| SRR6417967 | leaf | H2O_control | 49.40 | HC |
| SRR6417968 | leaf | H2O_control | 39.14 | HC |
| SRR6417969 | leaf | H2O_control | 50.86 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 28.00 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 25.16 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 54.86 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 56.75 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 40.35 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 50.07 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 57.46 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 48.58 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 32.34 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 52.99 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 41.10 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 66.02 | HC |
| SRR8611900 | leaf | Non-inoculated | 192.72 | HC |
| SRR8611901 | leaf | Non-inoculated | 198.25 | HC |
| SRR8611902 | leaf | Non-inoculated | 199.36 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 309.09 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 279.08 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 292.44 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 78.76 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 88.47 | HC |
| SRR1213692 | leaf | wt | 89.64 | HC |
| SRR1213693 | leaf | wt | 70.90 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 112.41 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 86.66 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 98.63 | HC |
| SRR6502088 | leaf | control | 104.34 | HC |
| SRR6502089 | leaf | control | 86.64 | HC |
| SRR6502090 | leaf | control | 72.32 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 98.90 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 99.98 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 41.61 | HC |
| SRR6502100 | leaf | control | 76.93 | HC |
| SRR6502101 | leaf | control | 82.33 | HC |
| SRR6502102 | leaf | control | 71.02 | HC |
| SRR5856927 | leaf | control | 39.70 | HC |
| SRR5856928 | leaf | control | 36.26 | HC |
| SRR5856929 | leaf | control | 37.81 | HC |
| SRR5856930 | leaf | salt | 25.87 | HC |
| SRR5856931 | leaf | salt | 31.42 | HC |
| SRR5856932 | leaf | salt | 24.64 | HC |
| SRR5856933 | leaf | control | 19.24 | HC |
| SRR5856934 | leaf | control | 21.16 | HC |
| SRR5856935 | leaf | control | 23.92 | HC |
| SRR5856936 | leaf | salt | 13.02 | HC |
| SRR5856937 | leaf | salt | 9.71 | HC |
| SRR5856938 | leaf | salt | 12.57 | HC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 29.09 | HC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 35.88 | HC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 30.99 | HC |
| SRR6053397 | leaf | gibberellic acid (GA) | 9.70 | HC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 15.78 | HC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 16.78 | HC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 22.29 | HC |
| SRR6168973 | leaf | none (control) | 170.06 | HC |
| SRR6168974 | leaf | none (control) | 189.59 | HC |
| SRR6168975 | leaf | none (control) | 184.44 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 226.41 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 29.10 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 263.93 | HC |
| SRR6168979 | leaf | none (control) | 35.45 | HC |
| SRR6168980 | leaf | none (control) | 36.63 | HC |
| SRR6168981 | leaf | none (control) | 100.32 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 97.85 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 95.57 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 93.79 | HC |
| SRR8582888 | panicle | AM | 59.61 | HC |
| SRR8582889 | panicle | AM | 35.67 | HC |
| SRR8582890 | panicle | AM | 46.49 | HC |
| SRR8582891 | panicle | PM | 100.82 | HC |
| SRR8582892 | panicle | PM | 114.96 | HC |
| SRR8582893 | panicle | PM | 105.52 | HC |
| SRR5110429 | panicle | Dawn | 89.92 | HC |
| SRR5110430 | panicle | Dawn | 79.36 | HC |
| SRR5110431 | panicle | Dawn | 76.79 | HC |
| SRR5110432 | panicle | Dawn | 54.86 | HC |
| SRR4947496 | root | control | 101.41 | HC |
| SRR5110433 | panicle | Dawn + 3.5h | 69.57 | HC |
| SRR5110434 | panicle | Dawn + 3.5h | 58.51 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 60.31 | HC |
| SRR5110436 | panicle | Dawn + 3.5h | 52.99 | HC |
| SRR5110437 | panicle | Dawn + 7h | 64.18 | HC |
| SRR5110438 | panicle | Dawn + 7h | 71.50 | HC |
| SRR5110439 | panicle | Dawn + 7h | 66.01 | HC |
| SRR5110440 | panicle | Dawn + 7h | 65.78 | HC |
| SRR5110441 | panicle | Dawn + 10.5h | 56.76 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 71.73 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 70.32 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 82.07 | HC |
| SRR5110445 | panicle | Dusk | 67.30 | HC |
| SRR5110446 | panicle | Dusk | 86.05 | HC |
| SRR5110447 | panicle | Dusk | 85.14 | HC |
| SRR5110448 | panicle | Dusk | 92.48 | HC |
| SRR5110449 | panicle | Dawn + 14h | 74.84 | HC |
| SRR5110450 | panicle | Dawn + 14h | 76.97 | HC |
| SRR5110451 | panicle | Dawn + 14h | 82.94 | HC |
| SRR5110452 | panicle | Dawn + 14h | 86.26 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 73.23 | HC |
| SRR5110454 | panicle | Dawn + 17.5h | 57.10 | HC |
| SRR5110455 | panicle | Dawn + 17.5h | 70.57 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 69.59 | HC |
| SRR5110457 | panicle | Dawn + 21h | 62.58 | HC |
| SRR5110458 | panicle | Dawn + 21h | 50.14 | HC |
| SRR5110459 | panicle | Dawn + 21h | 62.85 | HC |
| SRR5110460 | panicle | Dawn + 21h | 79.91 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 45.33 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 32.70 | HC |
| SRR1633182 | panicle | WT | 312.71 | HC |
| SRR1633185 | panicle | WT | 416.94 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 147.81 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 154.54 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 218.88 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 231.89 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 302.53 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 301.58 | HC |
| SRR5126147 | root | "mock,1_day" | 74.59 | HC |
| SRR5126148 | root | "mock,1_day" | 52.82 | HC |
| SRR5126149 | root | "mock,1_day" | 103.77 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 97.45 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 113.18 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 69.69 | HC |
| SRR5126153 | root | "mock,7_days" | 92.31 | HC |
| SRR5126155 | root | "mock,7_days" | 116.37 | HC |
| SRR5126157 | root | "mock,7_days" | 190.90 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 122.62 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 134.68 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 113.53 | HC |
| SRR5126165 | root | "mock,14_days" | 83.56 | HC |
| SRR5126167 | root | "mock,14_days" | 109.36 | HC |
| SRR5126169 | root | "mock,14_days" | 132.47 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 133.43 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 139.14 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 123.46 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 13.39 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 21.10 | HC |
| SRR1213694 | root | wt | 86.04 | HC |
| SRR1213695 | root | wt | 88.02 | HC |
| SRR4947478 | root | control | 104.06 | HC |
| SRR4947479 | root | control | 85.75 | HC |
| SRR4947480 | root | control | 113.55 | HC |
| SRR4947481 | root | control | 129.24 | HC |
| SRR4947482 | root | Al | 66.50 | HC |
| SRR4947483 | root | Al | 72.44 | HC |
| SRR4947484 | root | Al | 79.25 | HC |
| SRR4947485 | root | Al | 102.98 | HC |
| SRR4947487 | root | control | 91.15 | HC |
| SRR4947488 | root | control | 117.09 | HC |
| SRR4947489 | root | control | 122.02 | HC |
| SRR4947490 | root | Al | 87.70 | HC |
| SRR4947491 | root | Al | 102.43 | HC |
| SRR4947492 | root | Al | 94.30 | HC |
| SRR4947493 | root | Al | 93.53 | HC |
| SRR4947494 | root | control | 89.00 | HC |
| SRR4947497 | root | control | 149.79 | HC |
| SRR4947498 | root | Al | 131.48 | HC |
| SRR4947499 | root | Al | 94.84 | HC |
| SRR4947500 | root | Al | 98.37 | HC |
| SRR4947501 | root | Al | 147.32 | HC |
| SRR4947502 | root | control | 175.48 | HC |
| SRR4947503 | root | control | 123.53 | HC |
| SRR4947504 | root | control | 157.02 | HC |
| SRR4947505 | root | control | 166.15 | HC |
| SRR4947506 | root | Al | 85.49 | HC |
| SRR4947507 | root | Al | 130.17 | HC |
| SRR4947508 | root | Al | 75.96 | HC |
| SRR4947509 | root | Al | 85.69 | HC |
| SRR6502091 | root | 100 mM NaCl | 131.77 | HC |
| SRR6502092 | root | 100 mM NaCl | 188.19 | HC |
| SRR6502093 | root | 100 mM NaCl | 182.86 | HC |
| SRR6502094 | root | control | 141.21 | HC |
| SRR6502095 | root | control | 140.85 | HC |
| SRR6502096 | root | control | 108.61 | HC |
| SRR6502103 | root | 100 mM NaCl | 128.83 | HC |
| SRR6502104 | root | 100 mM NaCl | 153.04 | HC |
| SRR6502105 | root | 100 mM NaCl | 170.85 | HC |
| SRR6502106 | root | control | 133.60 | HC |
| SRR6502107 | root | control | 109.94 | HC |
| SRR6502108 | root | control | 102.17 | HC |
| SRR1740434 | root_differentiation_zone | wt | 24.72 | HC |
| SRR1740435 | root_differentiation_zone | wt | 19.27 | HC |
| SRR1740436 | root_differentiation_zone | wt | 30.99 | HC |
| SRR1740431 | root_elongation_zone | wt | 20.59 | HC |
| SRR1740432 | root_elongation_zone | wt | 26.15 | HC |
| SRR1740433 | root_elongation_zone | wt | 25.83 | HC |
| SRR1740428 | root_meristematic_zone | wt | 35.23 | HC |
| SRR1740429 | root_meristematic_zone | wt | 45.13 | HC |
| SRR1740430 | root_meristematic_zone | wt | 56.45 | HC |
| SRR6441554 | seedling | wild_type | 71.36 | HC |
| SRR6441555 | seedling | wild_type | 72.54 | HC |
| SRR2154086 | seedling | wt | 67.62 | HC |
| SRR2154082 | seedling | wt | 6.83 | HC |
| SRR2154083 | seedling | wt | 48.64 | HC |
| SRR2154084 | seedling | wt | 7.96 | HC |
| SRR2154085 | seedling | wt | 5.52 | HC |
| SRR2154087 | seedling | wt | 9.37 | HC |
| SRR3098741 | seedling | wt | 86.43 | HC |
| SRR3098742 | seedling | wt | 82.54 | HC |
| SRR3098743 | seedling | wt | 72.96 | HC |
| SRR2857719 | seedling | drought_stress_0h | 101.43 | HC |
| SRR2857720 | seedling | drought_stress_1h | 105.20 | HC |
| SRR2857721 | seedling | drought_stress_6h | 88.65 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 39.69 | HC |
| SRR1944583 | seedling | no_treatment | 50.49 | HC |
| SRR358791 | seedling | wt | 89.71 | HC |
| SRR358792 | seedling | wt | 87.30 | HC |
| SRR358793 | seedling | wt | 42.34 | HC |
| SRR358794 | seedling | wt | 45.24 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 50.68 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 60.66 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 36.56 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 36.86 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 43.36 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 45.76 | HC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 25.41 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 26.83 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 55.35 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 49.32 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 9.09 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 12.41 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 16.95 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 8.08 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 18.75 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 18.53 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 12.76 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 20.05 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 19.60 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 15.39 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 14.62 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 21.19 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 59.07 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 62.60 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 66.11 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 66.87 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 62.07 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 65.21 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 72.70 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 74.33 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 132.77 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 135.04 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 55.98 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 56.58 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 60.86 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 66.43 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 38.50 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 41.85 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 51.24 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 53.55 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 157.40 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 144.11 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 180.68 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 160.83 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 173.03 | HC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 200.86 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 245.17 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 181.94 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 184.31 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 199.55 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 162.43 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 149.76 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 175.50 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 165.58 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 189.11 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 169.35 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 178.54 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 182.70 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 205.09 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 183.88 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 193.14 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 212.56 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 191.68 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 221.52 | HC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 213.03 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 59.15 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 54.21 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 77.81 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 100.56 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 81.47 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 77.01 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 76.98 | HC |
| SRR1617559 | shoot_apical_meristem | no collect | 65.97 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 76.74 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 65.75 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 55.51 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 87.43 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 67.05 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 92.65 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 61.49 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 72.79 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 73.17 | HC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 66.00 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 68.65 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 67.98 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 58.62 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 62.31 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 64.33 | HC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 10.45 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 15.53 | HC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 11.14 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 9.28 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 12.16 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 10.68 | HC |