| SRR4457249 | 2nd_leaf | DAH4 | 23.86 | HC |
| SRR4457250 | 2nd_leaf | DAH4 | 17.05 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 20.97 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 15.89 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 16.93 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 17.72 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 17.99 | HC |
| SRR4457256 | 2nd_leaf | DAH20 | 18.92 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 20.65 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 18.28 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 16.95 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 17.60 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 23.98 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 17.46 | HC |
| SRR4457263 | 2nd_leaf | DAH36 | 29.74 | HC |
| SRR4457264 | 2nd_leaf | DAH44 | 27.18 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 44.96 | HC |
| SRR4457266 | 2nd_leaf | DAH44 | 24.43 | HC |
| SRR3745125 | anther | wt | 10.14 | HC |
| SRR3745126 | anther | wt | 9.45 | HC |
| SRR3745127 | anther | wt | 10.34 | HC |
| SRR358795 | callus | wt | 32.11 | HC |
| SRR358796 | callus | wt | 29.35 | HC |
| SRR358797 | callus | wt | 22.72 | HC |
| SRR358798 | callus | wt | 25.49 | HC |
| SRR6320473 | carpel | wt | 93.50 | HC |
| SRR6320498 | carpel | wt | 81.80 | HC |
| SRR5560727 | caryopsis | wild_type | 57.30 | HC |
| SRR5560728 | caryopsis | wild_type | 52.96 | HC |
| SRR5560729 | caryopsis | wild_type | 53.99 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 26.08 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 22.37 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 22.97 | HC |
| SRR4947495 | root | control | 69.69 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 19.20 | HC |
| SRR7265400 | coleoptile | 2dA | 6.87 | HC |
| SRR7265401 | coleoptile | 2dA | 6.40 | HC |
| SRR7265402 | coleoptile | 2dA | 9.03 | HC |
| SRR7265403 | coleoptile | 2dN | 8.75 | HC |
| SRR7265404 | coleoptile | 2dN | 8.24 | HC |
| SRR7265405 | coleoptile | 2dN | 8.64 | HC |
| SRR7265406 | coleoptile | 3dA | 5.95 | HC |
| SRR7265407 | coleoptile | 3dA | 5.82 | HC |
| SRR7265408 | coleoptile | 3dA | 3.32 | HC |
| SRR7265409 | coleoptile | 3dN | 5.04 | HC |
| SRR7265410 | coleoptile | 3dN | 5.21 | HC |
| SRR7265411 | coleoptile | 3dN | 6.42 | HC |
| SRR7265412 | coleoptile | 4dA | 4.73 | HC |
| SRR7265413 | coleoptile | 4dA | 7.18 | HC |
| SRR7265414 | coleoptile | 4dA | 8.15 | HC |
| SRR7265415 | coleoptile | 4dN | 5.99 | HC |
| SRR7265416 | coleoptile | 4dN | 5.60 | HC |
| SRR7265417 | coleoptile | 4dN | 5.64 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 6.54 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 6.71 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 6.29 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 41.63 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 43.86 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 81.90 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 88.98 | HC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 70.23 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 79.05 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 84.33 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 89.93 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 66.33 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 61.46 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 78.53 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 63.14 | HC |
| SRR7265373 | embryo | dry seed 0 h | 25.92 | HC |
| SRR7265374 | embryo | dry seed 0 h | 23.50 | HC |
| SRR7265375 | embryo | dry seed 0 h | 11.57 | HC |
| SRR7265376 | embryo | 1hA | 21.89 | HC |
| SRR7265377 | embryo | 1hA | 19.72 | HC |
| SRR7265378 | embryo | 1hA | 21.64 | HC |
| SRR7265379 | embryo | 1hN | 23.08 | HC |
| SRR7265380 | embryo | 1hN | 20.38 | HC |
| SRR7265381 | embryo | 1hN | 26.42 | HC |
| SRR7265382 | embryo | 3hA | 21.98 | HC |
| SRR7265383 | embryo | 3hA | 21.25 | HC |
| SRR7265384 | embryo | 3hA | 21.83 | HC |
| SRR7265385 | embryo | 3hN | 21.40 | HC |
| SRR7265386 | embryo | 3hN | 21.83 | HC |
| SRR7265387 | embryo | 3hN | 21.66 | HC |
| SRR7265388 | embryo | 12hA | 13.38 | HC |
| SRR7265389 | embryo | 12hA | 9.77 | HC |
| SRR7265390 | embryo | 12hA | 11.29 | HC |
| SRR7265391 | embryo | 12hN | 13.57 | HC |
| SRR7265392 | embryo | 12hN | 13.34 | HC |
| SRR7265393 | embryo | 12hN | 14.44 | HC |
| SRR7265394 | embryo | 24hA | 6.56 | HC |
| SRR7265395 | embryo | 24hA | 7.01 | HC |
| SRR7265396 | embryo | 24hA | 6.86 | HC |
| SRR7265397 | embryo | 24hN | 10.79 | HC |
| SRR7265398 | embryo | 24hN | 11.09 | HC |
| SRR7265399 | embryo | 24hN | 12.45 | HC |
| SRR2338866 | endosprem | control | 16.67 | HC |
| SRR2338867 | endosprem | control | 6.38 | HC |
| SRR2338868 | endosprem | high_temperature | 9.64 | HC |
| SRR2338869 | endosprem | high_temperature | 7.23 | HC |
| SRR976168 | flag_leaf | wild_type | 5.73 | HC |
| SRR4457231 | flag_leaf | DAH4 | 16.24 | HC |
| SRR4457232 | flag_leaf | DAH4 | 13.15 | HC |
| SRR4457233 | flag_leaf | DAH4 | 14.60 | HC |
| SRR4457234 | flag_leaf | DAH12 | 10.22 | HC |
| SRR4457235 | flag_leaf | DAH12 | 15.85 | HC |
| SRR4457236 | flag_leaf | DAH12 | 15.98 | HC |
| SRR4457237 | flag_leaf | DAH20 | 13.38 | HC |
| SRR4457238 | flag_leaf | DAH20 | 19.26 | HC |
| SRR4457239 | flag_leaf | DAH20 | 18.91 | HC |
| SRR4457240 | flag_leaf | DAH28 | 17.55 | HC |
| SRR4457241 | flag_leaf | DAH28 | 17.36 | HC |
| SRR4457242 | flag_leaf | DAH28 | 10.83 | HC |
| SRR4457243 | flag_leaf | DAH36 | 14.88 | HC |
| SRR4457244 | flag_leaf | DAH36 | 17.51 | HC |
| SRR4457245 | flag_leaf | DAH36 | 16.39 | HC |
| SRR4457246 | flag_leaf | DAH44 | 20.75 | HC |
| SRR4457247 | flag_leaf | DAH44 | 23.61 | HC |
| SRR4457248 | flag_leaf | DAH44 | 20.99 | HC |
| SRR1213690 | flower | wt(flower buds) | 24.80 | HC |
| SRR1213691 | flower | wt | 25.14 | HC |
| SRR8060835 | leaf | wild_type | 220.59 | HC |
| SRR8060836 | leaf | wild_type | 123.95 | HC |
| SRR8060837 | leaf | wild_type | 200.27 | HC |
| SRR8240824 | leaf | wild_type | 22.28 | HC |
| SRR8240825 | leaf | wild_type | 13.47 | HC |
| SRR8240826 | leaf | wild_type | 13.21 | HC |
| SRR8240818 | leaf | wild_type | 15.52 | HC |
| SRR8240819 | leaf | wild_type | 16.43 | HC |
| SRR8240820 | leaf | wild_type | 15.90 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 24.19 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 19.79 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 18.05 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 16.69 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 28.14 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 23.34 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 23.80 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 24.37 | HC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 29.85 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 25.46 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 26.64 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 26.58 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 26.13 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 27.97 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 31.14 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 24.63 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 25.96 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 28.60 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 23.15 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 32.68 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 28.17 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 29.88 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 30.90 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 27.55 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 25.03 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 22.11 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 24.08 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 24.52 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 24.79 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 22.28 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 25.42 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 23.16 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 22.79 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 19.45 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 28.29 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 20.36 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 26.83 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 23.45 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 20.11 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 25.73 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 40.56 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 46.85 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 37.71 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 38.22 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 40.55 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 46.85 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 37.71 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 38.22 | HC |
| SRR1761528 | leaf | drought | 40.55 | HC |
| SRR1761529 | leaf | drought | 46.85 | HC |
| SRR1761530 | leaf | control | 37.71 | HC |
| SRR1761531 | leaf | control | 38.22 | HC |
| SRR504365 | leaf | wt | 50.65 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 25.70 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 24.69 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 25.19 | HC |
| SRR6417967 | leaf | H2O_control | 14.30 | HC |
| SRR6417968 | leaf | H2O_control | 19.61 | HC |
| SRR6417969 | leaf | H2O_control | 19.56 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 28.55 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 32.58 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 36.58 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 41.03 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 26.53 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 28.70 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 37.18 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 36.85 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 33.87 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 46.60 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 29.78 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 41.24 | HC |
| SRR8611900 | leaf | Non-inoculated | 54.58 | HC |
| SRR8611901 | leaf | Non-inoculated | 57.45 | HC |
| SRR8611902 | leaf | Non-inoculated | 54.12 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 61.22 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 54.50 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 59.38 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 27.75 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 30.61 | HC |
| SRR1213692 | leaf | wt | 28.45 | HC |
| SRR1213693 | leaf | wt | 24.84 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 185.93 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 190.29 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 157.57 | HC |
| SRR6502088 | leaf | control | 147.54 | HC |
| SRR6502089 | leaf | control | 153.45 | HC |
| SRR6502090 | leaf | control | 152.51 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 40.11 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 35.87 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 38.72 | HC |
| SRR6502100 | leaf | control | 37.91 | HC |
| SRR6502101 | leaf | control | 36.28 | HC |
| SRR6502102 | leaf | control | 35.94 | HC |
| SRR5856927 | leaf | control | 105.70 | HC |
| SRR5856928 | leaf | control | 100.15 | HC |
| SRR5856929 | leaf | control | 104.49 | HC |
| SRR5856930 | leaf | salt | 133.95 | HC |
| SRR5856931 | leaf | salt | 144.54 | HC |
| SRR5856932 | leaf | salt | 128.05 | HC |
| SRR5856933 | leaf | control | 102.88 | HC |
| SRR5856934 | leaf | control | 94.64 | HC |
| SRR5856935 | leaf | control | 109.75 | HC |
| SRR5856936 | leaf | salt | 130.83 | HC |
| SRR5856937 | leaf | salt | 126.49 | HC |
| SRR5856938 | leaf | salt | 112.68 | HC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 89.82 | HC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 94.60 | HC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 134.05 | HC |
| SRR6053395 | leaf | gibberellic acid (GA) | 155.92 | HC |
| SRR6053396 | leaf | gibberellic acid (GA) | 142.27 | HC |
| SRR6053397 | leaf | gibberellic acid (GA) | 147.80 | HC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 120.53 | HC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 127.97 | HC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 133.06 | HC |
| SRR6168973 | leaf | none (control) | 63.21 | HC |
| SRR6168974 | leaf | none (control) | 71.51 | HC |
| SRR6168975 | leaf | none (control) | 88.79 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 251.89 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 101.07 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 338.53 | HC |
| SRR6168979 | leaf | none (control) | 38.85 | HC |
| SRR6168980 | leaf | none (control) | 26.29 | HC |
| SRR6168981 | leaf | none (control) | 35.59 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 247.11 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 267.91 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 209.41 | HC |
| SRR8582888 | panicle | AM | 9.04 | HC |
| SRR8582889 | panicle | AM | 12.09 | HC |
| SRR8582890 | panicle | AM | 9.86 | HC |
| SRR8582891 | panicle | PM | 25.42 | HC |
| SRR8582892 | panicle | PM | 20.21 | HC |
| SRR8582893 | panicle | PM | 32.83 | HC |
| SRR5110429 | panicle | Dawn | 64.72 | HC |
| SRR5110430 | panicle | Dawn | 69.86 | HC |
| SRR5110431 | panicle | Dawn | 65.76 | HC |
| SRR5110432 | panicle | Dawn | 41.42 | HC |
| SRR4947496 | root | control | 97.32 | HC |
| SRR5110433 | panicle | Dawn + 3.5h | 64.97 | HC |
| SRR5110434 | panicle | Dawn + 3.5h | 58.57 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 58.67 | HC |
| SRR5110436 | panicle | Dawn + 3.5h | 39.19 | HC |
| SRR5110437 | panicle | Dawn + 7h | 55.00 | HC |
| SRR5110438 | panicle | Dawn + 7h | 58.25 | HC |
| SRR5110439 | panicle | Dawn + 7h | 80.61 | HC |
| SRR5110440 | panicle | Dawn + 7h | 44.96 | HC |
| SRR5110441 | panicle | Dawn + 10.5h | 60.15 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 70.10 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 78.47 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 67.25 | HC |
| SRR5110445 | panicle | Dusk | 67.47 | HC |
| SRR5110446 | panicle | Dusk | 95.17 | HC |
| SRR5110447 | panicle | Dusk | 99.93 | HC |
| SRR5110448 | panicle | Dusk | 80.67 | HC |
| SRR5110449 | panicle | Dawn + 14h | 94.25 | HC |
| SRR5110450 | panicle | Dawn + 14h | 65.50 | HC |
| SRR5110451 | panicle | Dawn + 14h | 88.92 | HC |
| SRR5110452 | panicle | Dawn + 14h | 81.96 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 66.68 | HC |
| SRR5110454 | panicle | Dawn + 17.5h | 68.04 | HC |
| SRR5110455 | panicle | Dawn + 17.5h | 81.23 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 67.74 | HC |
| SRR5110457 | panicle | Dawn + 21h | 40.34 | HC |
| SRR5110458 | panicle | Dawn + 21h | 48.27 | HC |
| SRR5110459 | panicle | Dawn + 21h | 45.47 | HC |
| SRR5110460 | panicle | Dawn + 21h | 66.60 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 12.58 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 29.90 | HC |
| SRR1633182 | panicle | WT | 71.77 | HC |
| SRR1633185 | panicle | WT | 79.17 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 15.40 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 13.08 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 23.91 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 22.70 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 40.49 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 54.43 | HC |
| SRR5126147 | root | "mock,1_day" | 24.64 | HC |
| SRR5126148 | root | "mock,1_day" | 20.88 | HC |
| SRR5126149 | root | "mock,1_day" | 25.49 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 21.27 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 21.01 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 19.90 | HC |
| SRR5126153 | root | "mock,7_days" | 18.36 | HC |
| SRR5126155 | root | "mock,7_days" | 20.08 | HC |
| SRR5126157 | root | "mock,7_days" | 19.14 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 23.31 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 20.10 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 22.60 | HC |
| SRR5126165 | root | "mock,14_days" | 16.43 | HC |
| SRR5126167 | root | "mock,14_days" | 16.98 | HC |
| SRR5126169 | root | "mock,14_days" | 22.99 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 21.45 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 23.48 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 23.15 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 33.67 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 58.85 | HC |
| SRR1213694 | root | wt | 24.43 | HC |
| SRR1213695 | root | wt | 21.08 | HC |
| SRR4947478 | root | control | 62.92 | HC |
| SRR4947479 | root | control | 74.98 | HC |
| SRR4947480 | root | control | 100.40 | HC |
| SRR4947481 | root | control | 116.77 | HC |
| SRR4947482 | root | Al | 56.22 | HC |
| SRR4947483 | root | Al | 65.99 | HC |
| SRR4947484 | root | Al | 93.40 | HC |
| SRR4947485 | root | Al | 144.30 | HC |
| SRR4947487 | root | control | 74.80 | HC |
| SRR4947488 | root | control | 88.89 | HC |
| SRR4947489 | root | control | 88.55 | HC |
| SRR4947490 | root | Al | 76.77 | HC |
| SRR4947491 | root | Al | 75.22 | HC |
| SRR4947492 | root | Al | 81.16 | HC |
| SRR4947493 | root | Al | 105.87 | HC |
| SRR4947494 | root | control | 74.02 | HC |
| SRR4947497 | root | control | 79.59 | HC |
| SRR4947498 | root | Al | 87.00 | HC |
| SRR4947499 | root | Al | 71.13 | HC |
| SRR4947500 | root | Al | 73.34 | HC |
| SRR4947501 | root | Al | 94.11 | HC |
| SRR4947502 | root | control | 71.09 | HC |
| SRR4947503 | root | control | 53.83 | HC |
| SRR4947504 | root | control | 76.71 | HC |
| SRR4947505 | root | control | 75.36 | HC |
| SRR4947506 | root | Al | 69.09 | HC |
| SRR4947507 | root | Al | 60.34 | HC |
| SRR4947508 | root | Al | 72.06 | HC |
| SRR4947509 | root | Al | 80.06 | HC |
| SRR6502091 | root | 100 mM NaCl | 99.18 | HC |
| SRR6502092 | root | 100 mM NaCl | 138.07 | HC |
| SRR6502093 | root | 100 mM NaCl | 95.24 | HC |
| SRR6502094 | root | control | 125.69 | HC |
| SRR6502095 | root | control | 118.80 | HC |
| SRR6502096 | root | control | 97.56 | HC |
| SRR6502103 | root | 100 mM NaCl | 37.08 | HC |
| SRR6502104 | root | 100 mM NaCl | 40.66 | HC |
| SRR6502105 | root | 100 mM NaCl | 63.64 | HC |
| SRR6502106 | root | control | 48.17 | HC |
| SRR6502107 | root | control | 34.35 | HC |
| SRR6502108 | root | control | 33.27 | HC |
| SRR1740434 | root_differentiation_zone | wt | 17.36 | HC |
| SRR1740435 | root_differentiation_zone | wt | 19.53 | HC |
| SRR1740436 | root_differentiation_zone | wt | 20.95 | HC |
| SRR1740431 | root_elongation_zone | wt | 31.75 | HC |
| SRR1740432 | root_elongation_zone | wt | 23.80 | HC |
| SRR1740433 | root_elongation_zone | wt | 31.89 | HC |
| SRR1740428 | root_meristematic_zone | wt | 28.70 | HC |
| SRR1740429 | root_meristematic_zone | wt | 26.56 | HC |
| SRR1740430 | root_meristematic_zone | wt | 30.82 | HC |
| SRR6441554 | seedling | wild_type | 19.70 | HC |
| SRR6441555 | seedling | wild_type | 20.95 | HC |
| SRR2154086 | seedling | wt | 19.42 | HC |
| SRR2154082 | seedling | wt | 30.71 | HC |
| SRR2154083 | seedling | wt | 53.59 | HC |
| SRR2154084 | seedling | wt | 65.32 | HC |
| SRR2154085 | seedling | wt | 20.93 | HC |
| SRR2154087 | seedling | wt | 20.07 | HC |
| SRR3098741 | seedling | wt | 17.59 | HC |
| SRR3098742 | seedling | wt | 15.35 | HC |
| SRR3098743 | seedling | wt | 17.90 | HC |
| SRR2857719 | seedling | drought_stress_0h | 18.50 | HC |
| SRR2857720 | seedling | drought_stress_1h | 15.96 | HC |
| SRR2857721 | seedling | drought_stress_6h | 19.30 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 41.03 | HC |
| SRR1944583 | seedling | no_treatment | 27.64 | HC |
| SRR358791 | seedling | wt | 26.15 | HC |
| SRR358792 | seedling | wt | 27.01 | HC |
| SRR358793 | seedling | wt | 24.46 | HC |
| SRR358794 | seedling | wt | 26.63 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 22.28 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 16.74 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 17.84 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 20.63 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 24.88 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 19.82 | HC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 16.80 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 10.88 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 23.47 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 26.49 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 32.94 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 38.94 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 32.10 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 38.44 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 32.44 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 39.59 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 55.67 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 61.71 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 61.21 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 41.66 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 55.11 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 56.53 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 19.10 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 12.95 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 13.98 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 14.26 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 16.37 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 15.95 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 20.48 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 21.49 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 19.90 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 19.94 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 14.05 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 14.82 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 14.50 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 12.33 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 13.41 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 15.15 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 13.66 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 15.05 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 20.63 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 18.31 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 85.34 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 83.20 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 88.46 | HC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 163.89 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 99.03 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 110.35 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 76.81 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 90.23 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 76.89 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 82.54 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 86.67 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 69.24 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 71.41 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 86.74 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 88.43 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 91.73 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 109.26 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 83.63 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 67.62 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 69.36 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 90.60 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 90.47 | HC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 89.95 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 29.35 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 26.90 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 38.24 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 34.67 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 31.28 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 40.99 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 42.17 | HC |
| SRR1617559 | shoot_apical_meristem | no collect | 30.44 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 55.44 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 56.69 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 57.16 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 47.96 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 47.87 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 45.06 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 45.82 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 49.61 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 52.01 | HC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 81.20 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 80.20 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 57.96 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 58.91 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 71.08 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 71.05 | HC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 66.29 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 83.73 | HC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 58.73 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 66.71 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 64.50 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 67.63 | HC |