| SRR4457249 | 2nd_leaf | DAH4 | 81.96 | HC |
| SRR4457250 | 2nd_leaf | DAH4 | 78.51 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 82.81 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 35.34 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 34.75 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 29.38 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 29.91 | HC |
| SRR4457256 | 2nd_leaf | DAH20 | 28.50 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 28.95 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 38.50 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 32.52 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 40.05 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 60.32 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 39.65 | HC |
| SRR4457263 | 2nd_leaf | DAH36 | 36.20 | HC |
| SRR4457264 | 2nd_leaf | DAH44 | 39.09 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 51.92 | HC |
| SRR4457266 | 2nd_leaf | DAH44 | 42.57 | HC |
| SRR3745125 | anther | wt | 18.39 | HC |
| SRR3745126 | anther | wt | 16.24 | HC |
| SRR3745127 | anther | wt | 17.41 | HC |
| SRR358795 | callus | wt | 140.36 | HC |
| SRR358796 | callus | wt | 129.23 | HC |
| SRR358797 | callus | wt | 156.25 | HC |
| SRR358798 | callus | wt | 145.98 | HC |
| SRR5560727 | caryopsis | wild_type | 254.86 | HC |
| SRR5560728 | caryopsis | wild_type | 267.01 | HC |
| SRR5560729 | caryopsis | wild_type | 288.93 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 72.52 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 75.06 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 47.83 | HC |
| SRR4947495 | root | control | 135.02 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 55.92 | HC |
| SRR7265400 | coleoptile | 2dA | 46.80 | HC |
| SRR7265401 | coleoptile | 2dA | 43.88 | HC |
| SRR7265402 | coleoptile | 2dA | 40.46 | HC |
| SRR7265403 | coleoptile | 2dN | 68.72 | HC |
| SRR7265404 | coleoptile | 2dN | 68.62 | HC |
| SRR7265405 | coleoptile | 2dN | 64.41 | HC |
| SRR7265406 | coleoptile | 3dA | 28.78 | HC |
| SRR7265407 | coleoptile | 3dA | 25.79 | HC |
| SRR7265408 | coleoptile | 3dA | 20.98 | HC |
| SRR7265409 | coleoptile | 3dN | 53.70 | HC |
| SRR7265410 | coleoptile | 3dN | 47.25 | HC |
| SRR7265411 | coleoptile | 3dN | 46.73 | HC |
| SRR7265412 | coleoptile | 4dA | 24.28 | HC |
| SRR7265413 | coleoptile | 4dA | 46.02 | HC |
| SRR7265414 | coleoptile | 4dA | 28.57 | HC |
| SRR7265415 | coleoptile | 4dN | 58.25 | HC |
| SRR7265416 | coleoptile | 4dN | 49.11 | HC |
| SRR7265417 | coleoptile | 4dN | 46.28 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 33.03 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 29.09 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 31.12 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 125.01 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 165.20 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 128.24 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 121.38 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 150.09 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 173.61 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 151.41 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 175.57 | HC |
| SRR7265373 | embryo | dry seed 0 h | 48.23 | HC |
| SRR7265374 | embryo | dry seed 0 h | 52.26 | HC |
| SRR7265375 | embryo | dry seed 0 h | 14.84 | HC |
| SRR7265376 | embryo | 1hA | 39.00 | HC |
| SRR7265377 | embryo | 1hA | 38.66 | HC |
| SRR7265378 | embryo | 1hA | 43.20 | HC |
| SRR7265379 | embryo | 1hN | 47.29 | HC |
| SRR7265380 | embryo | 1hN | 43.98 | HC |
| SRR7265381 | embryo | 1hN | 44.81 | HC |
| SRR7265382 | embryo | 3hA | 54.55 | HC |
| SRR7265383 | embryo | 3hA | 52.16 | HC |
| SRR7265384 | embryo | 3hA | 54.84 | HC |
| SRR7265385 | embryo | 3hN | 40.97 | HC |
| SRR7265386 | embryo | 3hN | 39.90 | HC |
| SRR7265387 | embryo | 3hN | 40.24 | HC |
| SRR7265388 | embryo | 12hA | 66.66 | HC |
| SRR7265389 | embryo | 12hA | 76.47 | HC |
| SRR7265390 | embryo | 12hA | 69.64 | HC |
| SRR7265391 | embryo | 12hN | 91.25 | HC |
| SRR7265392 | embryo | 12hN | 80.43 | HC |
| SRR7265393 | embryo | 12hN | 82.67 | HC |
| SRR7265394 | embryo | 24hA | 55.56 | HC |
| SRR7265395 | embryo | 24hA | 77.50 | HC |
| SRR7265396 | embryo | 24hA | 64.51 | HC |
| SRR7265397 | embryo | 24hN | 76.07 | HC |
| SRR7265398 | embryo | 24hN | 75.04 | HC |
| SRR7265399 | embryo | 24hN | 72.14 | HC |
| SRR2338866 | endosprem | control | 62.75 | HC |
| SRR2338867 | endosprem | control | 27.35 | HC |
| SRR2338868 | endosprem | high_temperature | 32.51 | HC |
| SRR2338869 | endosprem | high_temperature | 47.87 | HC |
| SRR976168 | flag_leaf | wild_type | 13.42 | HC |
| SRR4457231 | flag_leaf | DAH4 | 41.95 | HC |
| SRR4457232 | flag_leaf | DAH4 | 47.88 | HC |
| SRR4457233 | flag_leaf | DAH4 | 51.42 | HC |
| SRR4457234 | flag_leaf | DAH12 | 21.17 | HC |
| SRR4457235 | flag_leaf | DAH12 | 24.53 | HC |
| SRR4457236 | flag_leaf | DAH12 | 22.73 | HC |
| SRR4457237 | flag_leaf | DAH20 | 20.46 | HC |
| SRR4457238 | flag_leaf | DAH20 | 21.74 | HC |
| SRR4457239 | flag_leaf | DAH20 | 20.47 | HC |
| SRR4457240 | flag_leaf | DAH28 | 28.72 | HC |
| SRR4457241 | flag_leaf | DAH28 | 23.53 | HC |
| SRR4457242 | flag_leaf | DAH28 | 23.67 | HC |
| SRR4457243 | flag_leaf | DAH36 | 28.68 | HC |
| SRR4457244 | flag_leaf | DAH36 | 22.23 | HC |
| SRR4457245 | flag_leaf | DAH36 | 30.75 | HC |
| SRR4457246 | flag_leaf | DAH44 | 32.39 | HC |
| SRR4457247 | flag_leaf | DAH44 | 32.85 | HC |
| SRR4457248 | flag_leaf | DAH44 | 26.79 | HC |
| SRR1213690 | flower | wt(flower buds) | 119.83 | HC |
| SRR1213691 | flower | wt | 106.86 | HC |
| SRR8060835 | leaf | wild_type | 109.74 | HC |
| SRR8060836 | leaf | wild_type | 200.83 | HC |
| SRR8060837 | leaf | wild_type | 103.33 | HC |
| SRR8240824 | leaf | wild_type | 25.57 | HC |
| SRR8240825 | leaf | wild_type | 18.89 | HC |
| SRR8240826 | leaf | wild_type | 13.37 | HC |
| SRR8240818 | leaf | wild_type | 14.12 | HC |
| SRR8240819 | leaf | wild_type | 17.33 | HC |
| SRR8240820 | leaf | wild_type | 17.77 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 50.16 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 47.13 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 50.87 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 48.80 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 170.80 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 135.26 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 161.73 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 144.16 | HC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 130.64 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 140.09 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 146.20 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 151.49 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 142.99 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 201.31 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 143.96 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 165.55 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 179.79 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 153.31 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 152.71 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 117.12 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 113.98 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 110.45 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 141.36 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 152.56 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 159.46 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 156.39 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 154.57 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 138.53 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 163.67 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 128.52 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 139.57 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 171.41 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 163.02 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 141.19 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 148.33 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 132.27 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 146.18 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 154.35 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 144.22 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 155.84 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 80.89 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 78.05 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 86.48 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 98.21 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 80.88 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 78.06 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 86.48 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 98.21 | HC |
| SRR1761528 | leaf | drought | 80.88 | HC |
| SRR1761529 | leaf | drought | 78.06 | HC |
| SRR1761530 | leaf | control | 86.48 | HC |
| SRR1761531 | leaf | control | 98.21 | HC |
| SRR504365 | leaf | wt | 112.79 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 76.82 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 62.40 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 84.30 | HC |
| SRR6417967 | leaf | H2O_control | 63.68 | HC |
| SRR6417968 | leaf | H2O_control | 63.51 | HC |
| SRR6417969 | leaf | H2O_control | 76.63 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 34.81 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 31.15 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 77.41 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 71.30 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 26.45 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 29.10 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 82.44 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 72.00 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 27.93 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 65.50 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 32.32 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 90.99 | HC |
| SRR8611900 | leaf | Non-inoculated | 132.50 | HC |
| SRR8611901 | leaf | Non-inoculated | 134.42 | HC |
| SRR8611902 | leaf | Non-inoculated | 126.21 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 120.56 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 108.90 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 101.57 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 89.12 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 96.69 | HC |
| SRR1213692 | leaf | wt | 88.43 | HC |
| SRR1213693 | leaf | wt | 83.12 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 86.93 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 84.82 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 76.98 | HC |
| SRR6502088 | leaf | control | 84.41 | HC |
| SRR6502089 | leaf | control | 82.77 | HC |
| SRR6502090 | leaf | control | 79.38 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 81.04 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 81.84 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 62.61 | HC |
| SRR6502100 | leaf | control | 76.03 | HC |
| SRR6502101 | leaf | control | 76.88 | HC |
| SRR6502102 | leaf | control | 61.23 | HC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 31.20 | HC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 23.61 | HC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 30.82 | HC |
| SRR6053395 | leaf | gibberellic acid (GA) | 36.20 | HC |
| SRR6053396 | leaf | gibberellic acid (GA) | 38.54 | HC |
| SRR6053397 | leaf | gibberellic acid (GA) | 33.84 | HC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 13.84 | HC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 7.53 | HC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 15.23 | HC |
| SRR6168973 | leaf | none (control) | 116.01 | HC |
| SRR6168974 | leaf | none (control) | 135.28 | HC |
| SRR6168975 | leaf | none (control) | 131.57 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 231.40 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 23.55 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 264.35 | HC |
| SRR6168979 | leaf | none (control) | 4.15 | HC |
| SRR6168980 | leaf | none (control) | 2.85 | HC |
| SRR6168981 | leaf | none (control) | 16.35 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 10.58 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 28.98 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 19.62 | HC |
| SRR8582888 | panicle | AM | 17.52 | HC |
| SRR8582889 | panicle | AM | 9.53 | HC |
| SRR8582890 | panicle | AM | 24.01 | HC |
| SRR8582891 | panicle | PM | 182.53 | HC |
| SRR8582892 | panicle | PM | 224.77 | HC |
| SRR8582893 | panicle | PM | 181.76 | HC |
| SRR5110429 | panicle | Dawn | 105.90 | HC |
| SRR5110430 | panicle | Dawn | 96.31 | HC |
| SRR5110431 | panicle | Dawn | 95.25 | HC |
| SRR5110432 | panicle | Dawn | 86.73 | HC |
| SRR4947496 | root | control | 127.32 | HC |
| SRR5110433 | panicle | Dawn + 3.5h | 92.83 | HC |
| SRR5110434 | panicle | Dawn + 3.5h | 86.50 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 74.60 | HC |
| SRR5110436 | panicle | Dawn + 3.5h | 86.29 | HC |
| SRR5110437 | panicle | Dawn + 7h | 128.07 | HC |
| SRR5110438 | panicle | Dawn + 7h | 130.09 | HC |
| SRR5110439 | panicle | Dawn + 7h | 79.11 | HC |
| SRR5110440 | panicle | Dawn + 7h | 127.42 | HC |
| SRR5110441 | panicle | Dawn + 10.5h | 91.98 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 114.59 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 106.78 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 150.19 | HC |
| SRR5110445 | panicle | Dusk | 108.42 | HC |
| SRR5110446 | panicle | Dusk | 150.88 | HC |
| SRR5110447 | panicle | Dusk | 140.57 | HC |
| SRR5110448 | panicle | Dusk | 176.75 | HC |
| SRR5110449 | panicle | Dawn + 14h | 128.40 | HC |
| SRR5110450 | panicle | Dawn + 14h | 90.15 | HC |
| SRR5110451 | panicle | Dawn + 14h | 113.61 | HC |
| SRR5110452 | panicle | Dawn + 14h | 127.78 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 85.57 | HC |
| SRR5110454 | panicle | Dawn + 17.5h | 67.84 | HC |
| SRR5110455 | panicle | Dawn + 17.5h | 80.41 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 107.94 | HC |
| SRR5110457 | panicle | Dawn + 21h | 92.33 | HC |
| SRR5110458 | panicle | Dawn + 21h | 58.90 | HC |
| SRR5110459 | panicle | Dawn + 21h | 81.18 | HC |
| SRR5110460 | panicle | Dawn + 21h | 92.73 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 50.04 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 23.98 | HC |
| SRR1633182 | panicle | WT | 276.08 | HC |
| SRR1633185 | panicle | WT | 394.65 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 41.96 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 45.33 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 83.34 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 91.85 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 237.31 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 208.50 | HC |
| SRR5126147 | root | "mock,1_day" | 93.05 | HC |
| SRR5126148 | root | "mock,1_day" | 82.41 | HC |
| SRR5126149 | root | "mock,1_day" | 134.18 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 144.59 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 151.82 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 107.81 | HC |
| SRR5126153 | root | "mock,7_days" | 85.47 | HC |
| SRR5126155 | root | "mock,7_days" | 97.07 | HC |
| SRR5126157 | root | "mock,7_days" | 141.33 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 106.05 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 117.19 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 104.34 | HC |
| SRR5126165 | root | "mock,14_days" | 94.77 | HC |
| SRR5126167 | root | "mock,14_days" | 85.89 | HC |
| SRR5126169 | root | "mock,14_days" | 119.28 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 128.41 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 123.39 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 150.15 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 21.60 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 26.34 | HC |
| SRR1213694 | root | wt | 83.31 | HC |
| SRR1213695 | root | wt | 73.78 | HC |
| SRR4947478 | root | control | 97.57 | HC |
| SRR4947479 | root | control | 90.89 | HC |
| SRR4947480 | root | control | 140.13 | HC |
| SRR4947481 | root | control | 148.10 | HC |
| SRR4947482 | root | Al | 63.48 | HC |
| SRR4947483 | root | Al | 88.62 | HC |
| SRR4947484 | root | Al | 162.69 | HC |
| SRR4947485 | root | Al | 139.79 | HC |
| SRR4947487 | root | control | 96.85 | HC |
| SRR4947488 | root | control | 138.96 | HC |
| SRR4947489 | root | control | 150.58 | HC |
| SRR4947490 | root | Al | 88.48 | HC |
| SRR4947491 | root | Al | 141.74 | HC |
| SRR4947492 | root | Al | 179.90 | HC |
| SRR4947493 | root | Al | 147.37 | HC |
| SRR4947494 | root | control | 97.86 | HC |
| SRR4947497 | root | control | 144.06 | HC |
| SRR4947498 | root | Al | 178.01 | HC |
| SRR4947499 | root | Al | 128.84 | HC |
| SRR4947500 | root | Al | 192.16 | HC |
| SRR4947501 | root | Al | 197.36 | HC |
| SRR4947502 | root | control | 154.75 | HC |
| SRR4947503 | root | control | 127.50 | HC |
| SRR4947504 | root | control | 208.20 | HC |
| SRR4947505 | root | control | 220.43 | HC |
| SRR4947506 | root | Al | 102.18 | HC |
| SRR4947507 | root | Al | 183.12 | HC |
| SRR4947508 | root | Al | 140.91 | HC |
| SRR4947509 | root | Al | 167.46 | HC |
| SRR6502091 | root | 100 mM NaCl | 129.13 | HC |
| SRR6502092 | root | 100 mM NaCl | 142.85 | HC |
| SRR6502093 | root | 100 mM NaCl | 145.81 | HC |
| SRR6502094 | root | control | 102.97 | HC |
| SRR6502095 | root | control | 111.49 | HC |
| SRR6502096 | root | control | 79.70 | HC |
| SRR6502103 | root | 100 mM NaCl | 109.45 | HC |
| SRR6502104 | root | 100 mM NaCl | 129.65 | HC |
| SRR6502105 | root | 100 mM NaCl | 152.47 | HC |
| SRR6502106 | root | control | 103.82 | HC |
| SRR6502107 | root | control | 92.63 | HC |
| SRR6502108 | root | control | 103.60 | HC |
| SRR1740434 | root_differentiation_zone | wt | 21.43 | HC |
| SRR1740435 | root_differentiation_zone | wt | 28.08 | HC |
| SRR1740436 | root_differentiation_zone | wt | 54.39 | HC |
| SRR1740431 | root_elongation_zone | wt | 24.86 | HC |
| SRR1740432 | root_elongation_zone | wt | 48.64 | HC |
| SRR1740433 | root_elongation_zone | wt | 50.81 | HC |
| SRR1740428 | root_meristematic_zone | wt | 40.03 | HC |
| SRR1740429 | root_meristematic_zone | wt | 61.32 | HC |
| SRR1740430 | root_meristematic_zone | wt | 72.80 | HC |
| SRR6441554 | seedling | wild_type | 73.01 | HC |
| SRR6441555 | seedling | wild_type | 59.45 | HC |
| SRR2154086 | seedling | wt | 93.43 | HC |
| SRR2154084 | seedling | wt | 92.13 | HC |
| SRR2154085 | seedling | wt | 94.45 | HC |
| SRR2154087 | seedling | wt | 94.83 | HC |
| SRR3098741 | seedling | wt | 53.41 | HC |
| SRR3098742 | seedling | wt | 52.13 | HC |
| SRR3098743 | seedling | wt | 45.56 | HC |
| SRR2857719 | seedling | drought_stress_0h | 89.46 | HC |
| SRR2857720 | seedling | drought_stress_1h | 56.30 | HC |
| SRR2857721 | seedling | drought_stress_6h | 36.11 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 5.11 | HC |
| SRR1944583 | seedling | no_treatment | 38.79 | HC |
| SRR358791 | seedling | wt | 123.81 | HC |
| SRR358792 | seedling | wt | 115.41 | HC |
| SRR358793 | seedling | wt | 87.91 | HC |
| SRR358794 | seedling | wt | 91.53 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 16.17 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 21.08 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 14.86 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 16.78 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 24.79 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 17.31 | HC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 8.82 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 7.65 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 27.70 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 18.18 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 47.47 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 54.65 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 55.83 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 36.30 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 33.13 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 30.00 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 26.56 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 25.78 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 24.61 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 18.03 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 21.10 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 36.20 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 64.74 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 59.17 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 63.27 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 63.51 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 76.54 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 76.53 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 91.79 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 95.77 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 82.72 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 78.64 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 48.85 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 50.58 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 43.83 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 49.99 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 31.45 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 34.71 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 54.44 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 52.86 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 82.02 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 93.23 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 197.97 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 199.61 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 190.46 | HC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 176.24 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 242.02 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 197.03 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 199.91 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 217.75 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 194.54 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 174.68 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 196.90 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 215.68 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 191.26 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 224.19 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 228.09 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 194.43 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 214.70 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 198.48 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 232.22 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 261.31 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 194.13 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 208.22 | HC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 242.17 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 120.40 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 126.52 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 113.76 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 137.89 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 104.05 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 78.94 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 77.14 | HC |
| SRR1617559 | shoot_apical_meristem | no collect | 61.12 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 113.63 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 100.52 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 90.73 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 150.20 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 106.30 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 141.38 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 114.96 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 114.71 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 109.36 | HC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 111.57 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 102.11 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 79.02 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 70.55 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 110.24 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 96.24 | HC |