| SRR3745127 | anther | wt | 6.58 | HC |
| SRR358795 | callus | wt | 24.51 | HC |
| SRR358796 | callus | wt | 16.38 | HC |
| SRR358797 | callus | wt | 15.45 | HC |
| SRR358798 | callus | wt | 15.70 | HC |
| SRR5560727 | caryopsis | wild_type | 9.22 | HC |
| SRR5560728 | caryopsis | wild_type | 13.73 | HC |
| SRR5560729 | caryopsis | wild_type | 13.69 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 15.31 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 19.12 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 7.89 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 13.95 | HC |
| SRR7265400 | coleoptile | 2dA | 14.14 | HC |
| SRR7265401 | coleoptile | 2dA | 13.69 | HC |
| SRR7265402 | coleoptile | 2dA | 13.86 | HC |
| SRR7265403 | coleoptile | 2dN | 21.95 | HC |
| SRR7265404 | coleoptile | 2dN | 21.69 | HC |
| SRR7265405 | coleoptile | 2dN | 20.17 | HC |
| SRR7265406 | coleoptile | 3dA | 8.23 | HC |
| SRR7265407 | coleoptile | 3dA | 8.50 | HC |
| SRR7265408 | coleoptile | 3dA | 6.36 | HC |
| SRR7265409 | coleoptile | 3dN | 19.13 | HC |
| SRR7265410 | coleoptile | 3dN | 16.18 | HC |
| SRR7265411 | coleoptile | 3dN | 15.72 | HC |
| SRR7265412 | coleoptile | 4dA | 4.20 | HC |
| SRR7265413 | coleoptile | 4dA | 11.06 | HC |
| SRR7265414 | coleoptile | 4dA | 6.64 | HC |
| SRR7265415 | coleoptile | 4dN | 14.34 | HC |
| SRR7265416 | coleoptile | 4dN | 12.53 | HC |
| SRR7265417 | coleoptile | 4dN | 13.10 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 11.77 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 12.57 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 10.44 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 6.98 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 7.26 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 7.92 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 9.64 | HC |
| SRR7265373 | embryo | dry seed 0 h | 15.66 | HC |
| SRR7265374 | embryo | dry seed 0 h | 17.16 | HC |
| SRR7265375 | embryo | dry seed 0 h | 5.15 | HC |
| SRR7265376 | embryo | 1hA | 13.32 | HC |
| SRR7265377 | embryo | 1hA | 11.67 | HC |
| SRR7265378 | embryo | 1hA | 12.69 | HC |
| SRR7265379 | embryo | 1hN | 13.37 | HC |
| SRR7265380 | embryo | 1hN | 13.08 | HC |
| SRR7265381 | embryo | 1hN | 12.29 | HC |
| SRR7265382 | embryo | 3hA | 19.33 | HC |
| SRR7265383 | embryo | 3hA | 17.67 | HC |
| SRR7265384 | embryo | 3hA | 19.57 | HC |
| SRR7265385 | embryo | 3hN | 12.15 | HC |
| SRR7265386 | embryo | 3hN | 11.26 | HC |
| SRR7265387 | embryo | 3hN | 10.38 | HC |
| SRR7265388 | embryo | 12hA | 25.80 | HC |
| SRR7265389 | embryo | 12hA | 27.84 | HC |
| SRR7265390 | embryo | 12hA | 26.01 | HC |
| SRR7265391 | embryo | 12hN | 35.21 | HC |
| SRR7265392 | embryo | 12hN | 30.50 | HC |
| SRR7265393 | embryo | 12hN | 31.79 | HC |
| SRR7265394 | embryo | 24hA | 21.73 | HC |
| SRR7265395 | embryo | 24hA | 25.25 | HC |
| SRR7265396 | embryo | 24hA | 21.11 | HC |
| SRR7265397 | embryo | 24hN | 33.14 | HC |
| SRR7265398 | embryo | 24hN | 28.84 | HC |
| SRR7265399 | embryo | 24hN | 27.96 | HC |
| SRR2338867 | endosprem | control | 3.18 | HC |
| SRR2338868 | endosprem | high_temperature | 3.22 | HC |
| SRR2338869 | endosprem | high_temperature | 3.55 | HC |
| SRR1213690 | flower | wt(flower buds) | 8.98 | HC |
| SRR1213691 | flower | wt | 10.25 | HC |
| SRR8240824 | leaf | wild_type | 3.34 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 5.15 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 5.68 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 6.73 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 6.40 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 8.87 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 9.73 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 14.97 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 9.77 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 8.13 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 8.25 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 11.94 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 7.19 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 7.23 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 10.37 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 9.54 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 9.11 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 11.98 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 10.72 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 6.49 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 7.51 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 7.29 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 6.33 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 6.91 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 9.29 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 12.98 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 7.62 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 8.25 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 8.06 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 9.04 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 7.78 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 10.33 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 9.05 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 10.36 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 8.35 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 5.15 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 7.83 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 9.16 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 7.83 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 9.16 | HC |
| SRR1761528 | leaf | drought | 7.83 | HC |
| SRR1761529 | leaf | drought | 9.16 | HC |
| SRR504365 | leaf | wt | 9.76 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 3.48 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 4.93 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 4.73 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 4.52 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 5.48 | HC |
| SRR8611900 | leaf | Non-inoculated | 5.16 | HC |
| SRR8611901 | leaf | Non-inoculated | 4.91 | HC |
| SRR8611902 | leaf | Non-inoculated | 4.60 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 5.53 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 5.96 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 6.04 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 7.29 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 7.48 | HC |
| SRR1213692 | leaf | wt | 9.91 | HC |
| SRR1213693 | leaf | wt | 10.09 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 4.81 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 4.78 | HC |
| SRR6168973 | leaf | none (control) | 8.18 | HC |
| SRR6168974 | leaf | none (control) | 6.62 | HC |
| SRR6168975 | leaf | none (control) | 7.87 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 15.83 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 7.16 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 14.00 | HC |
| SRR6168979 | leaf | none (control) | 3.98 | HC |
| SRR6168980 | leaf | none (control) | 3.86 | HC |
| SRR6168981 | leaf | none (control) | 5.66 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 7.23 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 7.07 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 7.63 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 3.47 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 3.25 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 3.92 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 3.86 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 6.16 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 5.50 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 17.68 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 15.89 | HC |
| SRR5126147 | root | "mock,1_day" | 10.39 | HC |
| SRR5126148 | root | "mock,1_day" | 12.73 | HC |
| SRR5126149 | root | "mock,1_day" | 10.12 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 11.21 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 11.14 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 10.18 | HC |
| SRR5126153 | root | "mock,7_days" | 10.94 | HC |
| SRR5126155 | root | "mock,7_days" | 10.73 | HC |
| SRR5126157 | root | "mock,7_days" | 12.95 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 10.54 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 13.33 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 15.24 | HC |
| SRR5126165 | root | "mock,14_days" | 11.89 | HC |
| SRR5126167 | root | "mock,14_days" | 7.64 | HC |
| SRR5126169 | root | "mock,14_days" | 10.74 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 12.59 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 12.15 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 16.93 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 3.32 | HC |
| SRR1213694 | root | wt | 3.33 | HC |
| SRR1213695 | root | wt | 11.62 | HC |
| SRR4947480 | root | control | 5.93 | HC |
| SRR4947484 | root | Al | 7.13 | HC |
| SRR4947488 | root | control | 5.95 | HC |
| SRR4947492 | root | Al | 7.41 | HC |
| SRR4947500 | root | Al | 8.55 | HC |
| SRR4947504 | root | control | 8.07 | HC |
| SRR4947508 | root | Al | 5.35 | HC |
| SRR6502091 | root | 100 mM NaCl | 7.18 | HC |
| SRR6502092 | root | 100 mM NaCl | 7.19 | HC |
| SRR6502093 | root | 100 mM NaCl | 10.62 | HC |
| SRR6502094 | root | control | 5.35 | HC |
| SRR6502095 | root | control | 6.48 | HC |
| SRR6502096 | root | control | 4.98 | HC |
| SRR6502103 | root | 100 mM NaCl | 9.57 | HC |
| SRR6502104 | root | 100 mM NaCl | 7.77 | HC |
| SRR6502105 | root | 100 mM NaCl | 9.03 | HC |
| SRR6502106 | root | control | 5.23 | HC |
| SRR6502107 | root | control | 5.64 | HC |
| SRR6502108 | root | control | 8.15 | HC |
| SRR1740435 | root_differentiation_zone | wt | 9.50 | HC |
| SRR1740436 | root_differentiation_zone | wt | 20.66 | HC |
| SRR1740431 | root_elongation_zone | wt | 7.50 | HC |
| SRR1740432 | root_elongation_zone | wt | 12.36 | HC |
| SRR1740433 | root_elongation_zone | wt | 10.07 | HC |
| SRR1740428 | root_meristematic_zone | wt | 7.29 | HC |
| SRR1740429 | root_meristematic_zone | wt | 4.73 | HC |
| SRR1740430 | root_meristematic_zone | wt | 9.07 | HC |
| SRR6441554 | seedling | wild_type | 4.92 | HC |
| SRR6441555 | seedling | wild_type | 3.77 | HC |
| SRR2154086 | seedling | wt | 7.12 | HC |
| SRR2154083 | seedling | wt | 3.75 | HC |
| SRR2154084 | seedling | wt | 7.31 | HC |
| SRR2154085 | seedling | wt | 5.53 | HC |
| SRR2154087 | seedling | wt | 6.33 | HC |
| SRR3098741 | seedling | wt | 3.40 | HC |
| SRR3098742 | seedling | wt | 3.70 | HC |
| SRR2857719 | seedling | drought_stress_0h | 6.85 | HC |
| SRR2857720 | seedling | drought_stress_1h | 4.66 | HC |
| SRR2857721 | seedling | drought_stress_6h | 4.83 | HC |
| SRR358791 | seedling | wt | 9.22 | HC |
| SRR358792 | seedling | wt | 9.28 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 3.29 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 5.68 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 8.12 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 4.03 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 4.49 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 7.27 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 7.74 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 7.06 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 5.53 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 3.52 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 3.86 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 4.27 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 15.08 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 15.52 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 14.07 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 19.07 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 15.17 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 17.46 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 16.71 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 17.72 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 12.35 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 12.97 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 15.52 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 17.39 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 15.60 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 18.63 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 16.88 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 16.32 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 17.53 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 18.58 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 19.24 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 16.52 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 16.93 | HC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 18.08 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 8.35 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 9.76 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 10.83 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 10.34 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 12.79 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 8.22 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 11.86 | HC |