| SRR358795 | callus | wt | 14.33 | HC |
| SRR358796 | callus | wt | 10.34 | HC |
| SRR358797 | callus | wt | 11.68 | HC |
| SRR358798 | callus | wt | 11.58 | HC |
| SRR5560729 | caryopsis | wild_type | 7.64 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 7.03 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 5.15 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 4.30 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 7.25 | HC |
| SRR2338868 | endosprem | high_temperature | 2.70 | HC |
| SRR1213690 | flower | wt(flower buds) | 8.16 | HC |
| SRR1213691 | flower | wt | 5.59 | HC |
| SRR8240824 | leaf | wild_type | 6.97 | HC |
| SRR8240825 | leaf | wild_type | 3.28 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 6.28 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 4.96 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 12.59 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 14.78 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 14.11 | HC |
| SRR5856927 | leaf | control | 22.02 | HC |
| SRR5856928 | leaf | control | 17.28 | HC |
| SRR5856929 | leaf | control | 16.68 | HC |
| SRR5856930 | leaf | salt | 20.58 | HC |
| SRR5856931 | leaf | salt | 17.33 | HC |
| SRR5856932 | leaf | salt | 19.66 | HC |
| SRR5856933 | leaf | control | 22.75 | HC |
| SRR5856934 | leaf | control | 34.18 | HC |
| SRR5856935 | leaf | control | 28.74 | HC |
| SRR5856936 | leaf | salt | 27.98 | HC |
| SRR5856937 | leaf | salt | 31.48 | HC |
| SRR5856938 | leaf | salt | 29.85 | HC |
| SRR6168973 | leaf | none (control) | 61.28 | HC |
| SRR6168974 | leaf | none (control) | 124.81 | HC |
| SRR6168975 | leaf | none (control) | 30.59 | HC |
| SRR6168980 | leaf | none (control) | 2.22 | HC |
| SRR6168981 | leaf | none (control) | 24.70 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 25.61 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 3.54 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 45.37 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 49.12 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 62.61 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 63.06 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 60.49 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 113.43 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 8.54 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 5.20 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 6.70 | HC |
| SRR5126155 | root | "mock,7_days" | 4.71 | HC |
| SRR5126157 | root | "mock,7_days" | 19.68 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 8.56 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 9.97 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 8.74 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 20.56 | HC |
| SRR2154086 | seedling | wt | 7.61 | HC |
| SRR2154087 | seedling | wt | 4.40 | HC |
| SRR3098741 | seedling | wt | 2.89 | HC |
| SRR3098742 | seedling | wt | 4.14 | HC |
| SRR3098743 | seedling | wt | 4.10 | HC |
| SRR2857719 | seedling | drought_stress_0h | 4.97 | HC |
| SRR2857721 | seedling | drought_stress_6h | 11.71 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 4.82 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 13.31 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 16.78 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 16.72 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 14.14 | HC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 20.75 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 19.89 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 16.43 | HC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 14.37 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 10.36 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 23.45 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 16.16 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 3.09 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 6.72 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 10.65 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 4.49 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 25.29 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 28.06 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 22.18 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 19.40 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 15.88 | HC |
| SRR1617559 | shoot_apical_meristem | no collect | 17.75 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 5.93 | HC |