| SRR4457249 | 2nd_leaf | DAH4 | 28.31 | HC |
| SRR4457250 | 2nd_leaf | DAH4 | 30.27 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 33.72 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 25.23 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 23.29 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 18.94 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 22.09 | HC |
| SRR4457256 | 2nd_leaf | DAH20 | 24.38 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 24.64 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 31.73 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 27.44 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 42.24 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 32.13 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 19.01 | HC |
| SRR4457263 | 2nd_leaf | DAH36 | 18.27 | HC |
| SRR4457264 | 2nd_leaf | DAH44 | 45.25 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 46.08 | HC |
| SRR4457266 | 2nd_leaf | DAH44 | 41.25 | HC |
| SRR3745125 | anther | wt | 19.18 | HC |
| SRR3745126 | anther | wt | 21.30 | HC |
| SRR3745127 | anther | wt | 16.06 | HC |
| SRR358795 | callus | wt | 33.35 | HC |
| SRR358796 | callus | wt | 35.17 | HC |
| SRR358797 | callus | wt | 32.57 | HC |
| SRR358798 | callus | wt | 31.64 | HC |
| SRR6320473 | carpel | wt | 60.03 | HC |
| SRR6320498 | carpel | wt | 65.01 | HC |
| SRR5560727 | caryopsis | wild_type | 54.51 | HC |
| SRR5560728 | caryopsis | wild_type | 66.27 | HC |
| SRR5560729 | caryopsis | wild_type | 43.34 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 34.52 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 35.43 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 25.60 | HC |
| SRR4947495 | root | control | 25.17 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 32.53 | HC |
| SRR7265400 | coleoptile | 2dA | 20.28 | HC |
| SRR7265401 | coleoptile | 2dA | 21.02 | HC |
| SRR7265402 | coleoptile | 2dA | 18.47 | HC |
| SRR7265403 | coleoptile | 2dN | 22.51 | HC |
| SRR7265404 | coleoptile | 2dN | 17.88 | HC |
| SRR7265405 | coleoptile | 2dN | 21.83 | HC |
| SRR7265406 | coleoptile | 3dA | 23.35 | HC |
| SRR7265407 | coleoptile | 3dA | 22.52 | HC |
| SRR7265408 | coleoptile | 3dA | 15.94 | HC |
| SRR7265409 | coleoptile | 3dN | 16.24 | HC |
| SRR7265410 | coleoptile | 3dN | 12.87 | HC |
| SRR7265411 | coleoptile | 3dN | 13.73 | HC |
| SRR7265412 | coleoptile | 4dA | 7.53 | HC |
| SRR7265413 | coleoptile | 4dA | 20.98 | HC |
| SRR7265414 | coleoptile | 4dA | 14.76 | HC |
| SRR7265415 | coleoptile | 4dN | 15.63 | HC |
| SRR7265416 | coleoptile | 4dN | 18.29 | HC |
| SRR7265417 | coleoptile | 4dN | 14.39 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 15.79 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 18.22 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 18.14 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 13.67 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 12.80 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 12.39 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 10.73 | HC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 15.58 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 8.84 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 10.28 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 12.39 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 10.97 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 12.05 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 18.87 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 15.52 | HC |
| SRR7265373 | embryo | dry seed 0 h | 14.06 | HC |
| SRR7265374 | embryo | dry seed 0 h | 12.47 | HC |
| SRR7265375 | embryo | dry seed 0 h | 4.08 | HC |
| SRR7265376 | embryo | 1hA | 12.79 | HC |
| SRR7265377 | embryo | 1hA | 10.27 | HC |
| SRR7265378 | embryo | 1hA | 13.93 | HC |
| SRR7265379 | embryo | 1hN | 12.18 | HC |
| SRR7265380 | embryo | 1hN | 13.86 | HC |
| SRR7265381 | embryo | 1hN | 13.66 | HC |
| SRR7265382 | embryo | 3hA | 20.50 | HC |
| SRR7265383 | embryo | 3hA | 19.26 | HC |
| SRR7265384 | embryo | 3hA | 20.42 | HC |
| SRR7265385 | embryo | 3hN | 20.30 | HC |
| SRR7265386 | embryo | 3hN | 19.40 | HC |
| SRR7265387 | embryo | 3hN | 18.24 | HC |
| SRR7265388 | embryo | 12hA | 28.75 | HC |
| SRR7265389 | embryo | 12hA | 24.60 | HC |
| SRR7265390 | embryo | 12hA | 23.84 | HC |
| SRR7265391 | embryo | 12hN | 29.06 | HC |
| SRR7265392 | embryo | 12hN | 27.15 | HC |
| SRR7265393 | embryo | 12hN | 29.20 | HC |
| SRR7265394 | embryo | 24hA | 22.00 | HC |
| SRR7265395 | embryo | 24hA | 24.29 | HC |
| SRR7265396 | embryo | 24hA | 21.45 | HC |
| SRR7265397 | embryo | 24hN | 32.53 | HC |
| SRR7265398 | embryo | 24hN | 24.90 | HC |
| SRR7265399 | embryo | 24hN | 27.78 | HC |
| SRR2338866 | endosprem | control | 13.33 | HC |
| SRR2338867 | endosprem | control | 7.09 | HC |
| SRR2338868 | endosprem | high_temperature | 5.03 | HC |
| SRR2338869 | endosprem | high_temperature | 11.50 | HC |
| SRR976168 | flag_leaf | wild_type | 4.28 | HC |
| SRR4457231 | flag_leaf | DAH4 | 30.10 | HC |
| SRR4457232 | flag_leaf | DAH4 | 33.64 | HC |
| SRR4457233 | flag_leaf | DAH4 | 29.72 | HC |
| SRR4457234 | flag_leaf | DAH12 | 19.34 | HC |
| SRR4457235 | flag_leaf | DAH12 | 19.00 | HC |
| SRR4457236 | flag_leaf | DAH12 | 13.45 | HC |
| SRR4457237 | flag_leaf | DAH20 | 16.11 | HC |
| SRR4457238 | flag_leaf | DAH20 | 16.02 | HC |
| SRR4457239 | flag_leaf | DAH20 | 12.83 | HC |
| SRR4457240 | flag_leaf | DAH28 | 27.08 | HC |
| SRR4457241 | flag_leaf | DAH28 | 22.25 | HC |
| SRR4457242 | flag_leaf | DAH28 | 27.61 | HC |
| SRR4457243 | flag_leaf | DAH36 | 29.59 | HC |
| SRR4457244 | flag_leaf | DAH36 | 17.43 | HC |
| SRR4457245 | flag_leaf | DAH36 | 14.10 | HC |
| SRR4457246 | flag_leaf | DAH44 | 41.56 | HC |
| SRR4457247 | flag_leaf | DAH44 | 45.68 | HC |
| SRR4457248 | flag_leaf | DAH44 | 37.03 | HC |
| SRR1213690 | flower | wt(flower buds) | 25.07 | HC |
| SRR1213691 | flower | wt | 29.55 | HC |
| SRR8060835 | leaf | wild_type | 21.83 | HC |
| SRR8060836 | leaf | wild_type | 22.98 | HC |
| SRR8060837 | leaf | wild_type | 24.04 | HC |
| SRR8240824 | leaf | wild_type | 9.58 | HC |
| SRR8240825 | leaf | wild_type | 7.95 | HC |
| SRR8240826 | leaf | wild_type | 10.02 | HC |
| SRR8240818 | leaf | wild_type | 10.91 | HC |
| SRR8240819 | leaf | wild_type | 18.17 | HC |
| SRR8240820 | leaf | wild_type | 17.30 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 28.65 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 32.55 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 32.13 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 35.83 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 67.30 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 64.76 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 70.03 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 87.63 | HC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 63.26 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 74.59 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 58.41 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 51.68 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 55.09 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 51.79 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 51.15 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 49.12 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 86.45 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 58.13 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 67.16 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 65.08 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 91.16 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 105.23 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 65.95 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 59.06 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 62.93 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 56.96 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 44.92 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 42.74 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 54.03 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 39.34 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 42.37 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 47.36 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 39.72 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 38.18 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 42.21 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 35.81 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 43.44 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 44.13 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 37.15 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 41.36 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 39.83 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 43.43 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 22.63 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 18.84 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 39.83 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 43.43 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 22.63 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 18.84 | HC |
| SRR1761528 | leaf | drought | 39.83 | HC |
| SRR1761529 | leaf | drought | 43.43 | HC |
| SRR1761530 | leaf | control | 22.63 | HC |
| SRR1761531 | leaf | control | 18.84 | HC |
| SRR504365 | leaf | wt | 69.61 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 13.53 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 11.00 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 13.22 | HC |
| SRR6417967 | leaf | H2O_control | 18.64 | HC |
| SRR6417968 | leaf | H2O_control | 14.04 | HC |
| SRR6417969 | leaf | H2O_control | 15.54 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 11.49 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 17.58 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 14.23 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 16.50 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 14.11 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 14.59 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 12.58 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 11.39 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 33.15 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 17.97 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 16.11 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 22.58 | HC |
| SRR8611900 | leaf | Non-inoculated | 19.05 | HC |
| SRR8611901 | leaf | Non-inoculated | 18.02 | HC |
| SRR8611902 | leaf | Non-inoculated | 18.52 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 27.22 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 29.59 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 27.47 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 32.99 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 35.94 | HC |
| SRR1213692 | leaf | wt | 45.34 | HC |
| SRR1213693 | leaf | wt | 35.70 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 24.09 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 22.52 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 22.61 | HC |
| SRR6502088 | leaf | control | 23.74 | HC |
| SRR6502089 | leaf | control | 32.05 | HC |
| SRR6502090 | leaf | control | 26.32 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 23.67 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 23.23 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 26.39 | HC |
| SRR6502100 | leaf | control | 25.98 | HC |
| SRR6502101 | leaf | control | 17.08 | HC |
| SRR6502102 | leaf | control | 16.75 | HC |
| SRR5856927 | leaf | control | 16.57 | HC |
| SRR5856928 | leaf | control | 15.70 | HC |
| SRR5856929 | leaf | control | 13.20 | HC |
| SRR5856930 | leaf | salt | 12.86 | HC |
| SRR5856931 | leaf | salt | 14.81 | HC |
| SRR5856932 | leaf | salt | 12.99 | HC |
| SRR5856933 | leaf | control | 17.32 | HC |
| SRR5856934 | leaf | control | 16.84 | HC |
| SRR5856935 | leaf | control | 21.54 | HC |
| SRR5856936 | leaf | salt | 15.87 | HC |
| SRR5856937 | leaf | salt | 15.77 | HC |
| SRR5856938 | leaf | salt | 15.00 | HC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 33.14 | HC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 53.13 | HC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 53.61 | HC |
| SRR6053395 | leaf | gibberellic acid (GA) | 48.84 | HC |
| SRR6053396 | leaf | gibberellic acid (GA) | 51.33 | HC |
| SRR6053397 | leaf | gibberellic acid (GA) | 52.14 | HC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 24.44 | HC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 29.69 | HC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 45.05 | HC |
| SRR6168973 | leaf | none (control) | 29.49 | HC |
| SRR6168974 | leaf | none (control) | 38.73 | HC |
| SRR6168975 | leaf | none (control) | 36.53 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 59.78 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 9.57 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 61.54 | HC |
| SRR6168979 | leaf | none (control) | 5.54 | HC |
| SRR6168980 | leaf | none (control) | 13.86 | HC |
| SRR6168981 | leaf | none (control) | 16.63 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 23.29 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 18.24 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 17.72 | HC |
| SRR8582888 | panicle | AM | 22.41 | HC |
| SRR8582889 | panicle | AM | 12.23 | HC |
| SRR8582890 | panicle | AM | 21.55 | HC |
| SRR8582891 | panicle | PM | 65.91 | HC |
| SRR8582892 | panicle | PM | 88.70 | HC |
| SRR8582893 | panicle | PM | 57.44 | HC |
| SRR5110429 | panicle | Dawn | 31.94 | HC |
| SRR5110430 | panicle | Dawn | 34.90 | HC |
| SRR5110431 | panicle | Dawn | 29.93 | HC |
| SRR5110432 | panicle | Dawn | 17.36 | HC |
| SRR4947496 | root | control | 18.59 | HC |
| SRR5110433 | panicle | Dawn + 3.5h | 19.70 | HC |
| SRR5110434 | panicle | Dawn + 3.5h | 13.81 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 17.25 | HC |
| SRR5110436 | panicle | Dawn + 3.5h | 16.23 | HC |
| SRR5110437 | panicle | Dawn + 7h | 20.57 | HC |
| SRR5110438 | panicle | Dawn + 7h | 18.44 | HC |
| SRR5110439 | panicle | Dawn + 7h | 18.40 | HC |
| SRR5110440 | panicle | Dawn + 7h | 19.56 | HC |
| SRR5110441 | panicle | Dawn + 10.5h | 18.26 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 21.51 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 21.56 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 22.01 | HC |
| SRR5110445 | panicle | Dusk | 30.78 | HC |
| SRR5110446 | panicle | Dusk | 31.18 | HC |
| SRR5110447 | panicle | Dusk | 32.64 | HC |
| SRR5110448 | panicle | Dusk | 32.13 | HC |
| SRR5110449 | panicle | Dawn + 14h | 34.07 | HC |
| SRR5110450 | panicle | Dawn + 14h | 20.14 | HC |
| SRR5110451 | panicle | Dawn + 14h | 25.53 | HC |
| SRR5110452 | panicle | Dawn + 14h | 26.17 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 16.45 | HC |
| SRR5110454 | panicle | Dawn + 17.5h | 15.97 | HC |
| SRR5110455 | panicle | Dawn + 17.5h | 19.71 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 33.25 | HC |
| SRR5110457 | panicle | Dawn + 21h | 14.18 | HC |
| SRR5110458 | panicle | Dawn + 21h | 16.85 | HC |
| SRR5110459 | panicle | Dawn + 21h | 19.17 | HC |
| SRR5110460 | panicle | Dawn + 21h | 29.34 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 16.93 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 5.08 | HC |
| SRR1633182 | panicle | WT | 15.34 | HC |
| SRR1633185 | panicle | WT | 24.25 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 54.15 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 60.83 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 61.20 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 67.70 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 81.26 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 70.50 | HC |
| SRR5126147 | root | "mock,1_day" | 14.98 | HC |
| SRR5126148 | root | "mock,1_day" | 14.03 | HC |
| SRR5126149 | root | "mock,1_day" | 18.81 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 17.50 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 14.83 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 15.20 | HC |
| SRR5126153 | root | "mock,7_days" | 21.61 | HC |
| SRR5126155 | root | "mock,7_days" | 28.07 | HC |
| SRR5126157 | root | "mock,7_days" | 34.12 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 37.58 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 32.43 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 33.62 | HC |
| SRR5126165 | root | "mock,14_days" | 26.40 | HC |
| SRR5126167 | root | "mock,14_days" | 36.17 | HC |
| SRR5126169 | root | "mock,14_days" | 26.55 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 33.92 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 30.97 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 40.32 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 9.63 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 7.56 | HC |
| SRR1213694 | root | wt | 26.28 | HC |
| SRR1213695 | root | wt | 49.54 | HC |
| SRR4947478 | root | control | 18.21 | HC |
| SRR4947479 | root | control | 20.72 | HC |
| SRR4947480 | root | control | 19.93 | HC |
| SRR4947481 | root | control | 22.64 | HC |
| SRR4947482 | root | Al | 19.48 | HC |
| SRR4947483 | root | Al | 22.27 | HC |
| SRR4947484 | root | Al | 18.81 | HC |
| SRR4947485 | root | Al | 27.11 | HC |
| SRR4947487 | root | control | 20.80 | HC |
| SRR4947488 | root | control | 16.53 | HC |
| SRR4947489 | root | control | 20.74 | HC |
| SRR4947490 | root | Al | 21.43 | HC |
| SRR4947491 | root | Al | 28.74 | HC |
| SRR4947492 | root | Al | 24.11 | HC |
| SRR4947493 | root | Al | 18.86 | HC |
| SRR4947494 | root | control | 21.00 | HC |
| SRR4947497 | root | control | 31.68 | HC |
| SRR4947498 | root | Al | 34.54 | HC |
| SRR4947499 | root | Al | 23.43 | HC |
| SRR4947500 | root | Al | 28.28 | HC |
| SRR4947501 | root | Al | 32.95 | HC |
| SRR4947502 | root | control | 27.23 | HC |
| SRR4947503 | root | control | 23.25 | HC |
| SRR4947504 | root | control | 19.93 | HC |
| SRR4947505 | root | control | 28.11 | HC |
| SRR4947506 | root | Al | 20.85 | HC |
| SRR4947507 | root | Al | 39.32 | HC |
| SRR4947508 | root | Al | 17.47 | HC |
| SRR4947509 | root | Al | 24.21 | HC |
| SRR6502091 | root | 100 mM NaCl | 20.89 | HC |
| SRR6502092 | root | 100 mM NaCl | 22.92 | HC |
| SRR6502093 | root | 100 mM NaCl | 29.46 | HC |
| SRR6502094 | root | control | 22.51 | HC |
| SRR6502095 | root | control | 24.46 | HC |
| SRR6502096 | root | control | 20.67 | HC |
| SRR6502103 | root | 100 mM NaCl | 24.36 | HC |
| SRR6502104 | root | 100 mM NaCl | 23.98 | HC |
| SRR6502105 | root | 100 mM NaCl | 24.45 | HC |
| SRR6502106 | root | control | 18.91 | HC |
| SRR6502107 | root | control | 20.31 | HC |
| SRR6502108 | root | control | 23.85 | HC |
| SRR1740434 | root_differentiation_zone | wt | 14.33 | HC |
| SRR1740435 | root_differentiation_zone | wt | 11.17 | HC |
| SRR1740436 | root_differentiation_zone | wt | 18.75 | HC |
| SRR1740431 | root_elongation_zone | wt | 15.33 | HC |
| SRR1740432 | root_elongation_zone | wt | 22.28 | HC |
| SRR1740433 | root_elongation_zone | wt | 23.62 | HC |
| SRR1740428 | root_meristematic_zone | wt | 10.77 | HC |
| SRR1740429 | root_meristematic_zone | wt | 12.69 | HC |
| SRR1740430 | root_meristematic_zone | wt | 17.72 | HC |
| SRR6441554 | seedling | wild_type | 18.89 | HC |
| SRR6441555 | seedling | wild_type | 22.64 | HC |
| SRR2154086 | seedling | wt | 34.07 | HC |
| SRR2154082 | seedling | wt | 39.08 | HC |
| SRR2154083 | seedling | wt | 28.75 | HC |
| SRR2154084 | seedling | wt | 31.21 | HC |
| SRR2154085 | seedling | wt | 35.04 | HC |
| SRR2154087 | seedling | wt | 27.15 | HC |
| SRR3098741 | seedling | wt | 16.11 | HC |
| SRR3098742 | seedling | wt | 20.22 | HC |
| SRR3098743 | seedling | wt | 18.57 | HC |
| SRR2857719 | seedling | drought_stress_0h | 30.76 | HC |
| SRR2857720 | seedling | drought_stress_1h | 30.35 | HC |
| SRR2857721 | seedling | drought_stress_6h | 20.06 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 70.34 | HC |
| SRR1944583 | seedling | no_treatment | 15.36 | HC |
| SRR358791 | seedling | wt | 65.05 | HC |
| SRR358792 | seedling | wt | 56.38 | HC |
| SRR358793 | seedling | wt | 71.33 | HC |
| SRR358794 | seedling | wt | 66.65 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 7.49 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 7.53 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 7.51 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 10.39 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 10.07 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 7.86 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 7.02 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 16.83 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 15.70 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 19.72 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 17.80 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 17.15 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 15.47 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 17.28 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 20.62 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 20.27 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 18.18 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 39.62 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 33.54 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 21.20 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 22.84 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 28.85 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 26.61 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 35.33 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 36.28 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 12.59 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 15.62 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 15.19 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 15.21 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 24.09 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 28.00 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 41.99 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 51.42 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 36.57 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 39.01 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 64.90 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 60.36 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 66.99 | HC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 74.97 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 84.03 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 81.72 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 72.17 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 68.51 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 70.60 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 57.00 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 59.29 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 64.24 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 83.09 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 85.59 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 79.08 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 79.58 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 83.98 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 83.67 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 76.98 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 71.53 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 76.81 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 86.90 | HC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 123.33 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 33.04 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 29.73 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 33.14 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 39.59 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 22.99 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 21.16 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 28.92 | HC |
| SRR1617559 | shoot_apical_meristem | no collect | 33.47 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 34.14 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 28.01 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 28.30 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 32.09 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 24.11 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 29.60 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 11.49 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 12.79 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 13.05 | HC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 16.08 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 14.88 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 13.16 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 10.57 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 13.43 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 13.00 | HC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 14.66 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 14.88 | HC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 18.62 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 12.83 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 11.28 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 9.60 | HC |