| SRR4457250 | 2nd_leaf | DAH4 | 4.94 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 5.63 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 5.57 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 6.21 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 5.60 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 4.99 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 3.95 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 6.84 | HC |
| SRR3745126 | anther | wt | 6.76 | HC |
| SRR5560727 | caryopsis | wild_type | 7.99 | HC |
| SRR5560728 | caryopsis | wild_type | 8.77 | HC |
| SRR5560729 | caryopsis | wild_type | 9.63 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 5.45 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 4.40 | HC |
| SRR7265400 | coleoptile | 2dA | 5.58 | HC |
| SRR7265401 | coleoptile | 2dA | 5.17 | HC |
| SRR7265402 | coleoptile | 2dA | 4.79 | HC |
| SRR7265403 | coleoptile | 2dN | 7.17 | HC |
| SRR7265404 | coleoptile | 2dN | 6.70 | HC |
| SRR7265405 | coleoptile | 2dN | 6.95 | HC |
| SRR7265406 | coleoptile | 3dA | 4.90 | HC |
| SRR7265407 | coleoptile | 3dA | 4.21 | HC |
| SRR7265409 | coleoptile | 3dN | 6.98 | HC |
| SRR7265410 | coleoptile | 3dN | 6.11 | HC |
| SRR7265411 | coleoptile | 3dN | 6.55 | HC |
| SRR7265413 | coleoptile | 4dA | 5.98 | HC |
| SRR7265415 | coleoptile | 4dN | 7.17 | HC |
| SRR7265416 | coleoptile | 4dN | 5.88 | HC |
| SRR7265417 | coleoptile | 4dN | 5.49 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 4.29 | HC |
| SRR7265373 | embryo | dry seed 0 h | 4.96 | HC |
| SRR7265374 | embryo | dry seed 0 h | 5.84 | HC |
| SRR7265376 | embryo | 1hA | 3.76 | HC |
| SRR7265377 | embryo | 1hA | 4.25 | HC |
| SRR7265378 | embryo | 1hA | 4.19 | HC |
| SRR7265379 | embryo | 1hN | 4.90 | HC |
| SRR7265380 | embryo | 1hN | 4.18 | HC |
| SRR7265381 | embryo | 1hN | 5.04 | HC |
| SRR7265385 | embryo | 3hN | 5.01 | HC |
| SRR7265386 | embryo | 3hN | 4.14 | HC |
| SRR7265387 | embryo | 3hN | 4.40 | HC |
| SRR7265388 | embryo | 12hA | 6.63 | HC |
| SRR7265389 | embryo | 12hA | 6.91 | HC |
| SRR7265390 | embryo | 12hA | 7.76 | HC |
| SRR7265391 | embryo | 12hN | 7.92 | HC |
| SRR7265392 | embryo | 12hN | 6.79 | HC |
| SRR7265393 | embryo | 12hN | 7.22 | HC |
| SRR7265394 | embryo | 24hA | 6.67 | HC |
| SRR7265395 | embryo | 24hA | 7.51 | HC |
| SRR7265396 | embryo | 24hA | 7.10 | HC |
| SRR7265397 | embryo | 24hN | 9.23 | HC |
| SRR7265398 | embryo | 24hN | 7.40 | HC |
| SRR7265399 | embryo | 24hN | 8.35 | HC |
| SRR2338868 | endosprem | high_temperature | 2.72 | HC |
| SRR4457231 | flag_leaf | DAH4 | 4.33 | HC |
| SRR4457232 | flag_leaf | DAH4 | 4.79 | HC |
| SRR4457233 | flag_leaf | DAH4 | 4.81 | HC |
| SRR4457234 | flag_leaf | DAH12 | 3.94 | HC |
| SRR4457235 | flag_leaf | DAH12 | 3.93 | HC |
| SRR4457236 | flag_leaf | DAH12 | 4.39 | HC |
| SRR4457237 | flag_leaf | DAH20 | 4.14 | HC |
| SRR4457238 | flag_leaf | DAH20 | 4.19 | HC |
| SRR4457243 | flag_leaf | DAH36 | 4.90 | HC |
| SRR4457244 | flag_leaf | DAH36 | 5.10 | HC |
| SRR4457245 | flag_leaf | DAH36 | 6.69 | HC |
| SRR1213690 | flower | wt(flower buds) | 4.87 | HC |
| SRR1213691 | flower | wt | 6.14 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 5.69 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 5.80 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 5.62 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 5.63 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 5.47 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 6.44 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 5.50 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 5.46 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 5.36 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 6.02 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 6.06 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 6.51 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 5.07 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 4.90 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 6.66 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 6.31 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 5.49 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 5.54 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.96 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 5.75 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 5.56 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 6.17 | HC |
| SRR504365 | leaf | wt | 4.53 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 3.93 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 3.69 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 5.00 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 4.47 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 4.85 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 5.01 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 4.86 | HC |
| SRR1213692 | leaf | wt | 5.23 | HC |
| SRR1213693 | leaf | wt | 5.60 | HC |
| SRR5856936 | leaf | salt | 2.03 | HC |
| SRR5856938 | leaf | salt | 2.01 | HC |
| SRR8582890 | panicle | AM | 3.32 | HC |
| SRR5110429 | panicle | Dawn | 5.25 | HC |
| SRR5110431 | panicle | Dawn | 4.98 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 4.44 | HC |
| SRR5110438 | panicle | Dawn + 7h | 6.14 | HC |
| SRR5110439 | panicle | Dawn + 7h | 7.95 | HC |
| SRR5110441 | panicle | Dawn + 10.5h | 6.06 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 5.09 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 5.73 | HC |
| SRR5110451 | panicle | Dawn + 14h | 4.42 | HC |
| SRR5110458 | panicle | Dawn + 21h | 3.61 | HC |
| SRR5110460 | panicle | Dawn + 21h | 5.89 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 2.42 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 7.81 | HC |
| SRR5126147 | root | "mock,1_day" | 5.48 | HC |
| SRR5126148 | root | "mock,1_day" | 4.66 | HC |
| SRR5126149 | root | "mock,1_day" | 6.35 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 6.70 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 5.88 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 5.22 | HC |
| SRR5126153 | root | "mock,7_days" | 6.32 | HC |
| SRR5126155 | root | "mock,7_days" | 5.33 | HC |
| SRR5126157 | root | "mock,7_days" | 8.47 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 5.30 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 5.72 | HC |
| SRR5126165 | root | "mock,14_days" | 6.81 | HC |
| SRR5126167 | root | "mock,14_days" | 4.49 | HC |
| SRR5126169 | root | "mock,14_days" | 6.09 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 5.09 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 6.90 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 2.91 | HC |
| SRR1213695 | root | wt | 5.56 | HC |
| SRR4947485 | root | Al | 5.26 | HC |
| SRR6502103 | root | 100 mM NaCl | 6.01 | HC |
| SRR6502104 | root | 100 mM NaCl | 6.11 | HC |
| SRR6502105 | root | 100 mM NaCl | 5.40 | HC |
| SRR6502106 | root | control | 4.90 | HC |
| SRR6502107 | root | control | 5.36 | HC |
| SRR6502108 | root | control | 6.19 | HC |
| SRR1740435 | root_differentiation_zone | wt | 3.11 | HC |
| SRR1740436 | root_differentiation_zone | wt | 3.34 | HC |
| SRR1740432 | root_elongation_zone | wt | 5.60 | HC |
| SRR1740433 | root_elongation_zone | wt | 4.37 | HC |
| SRR1740429 | root_meristematic_zone | wt | 3.58 | HC |
| SRR6441554 | seedling | wild_type | 3.25 | HC |
| SRR6441555 | seedling | wild_type | 3.21 | HC |
| SRR2154086 | seedling | wt | 5.36 | HC |
| SRR2154085 | seedling | wt | 4.99 | HC |
| SRR2154087 | seedling | wt | 4.33 | HC |
| SRR3098741 | seedling | wt | 3.13 | HC |
| SRR3098742 | seedling | wt | 3.18 | HC |
| SRR3098743 | seedling | wt | 3.47 | HC |
| SRR2857719 | seedling | drought_stress_0h | 5.84 | HC |
| SRR2857720 | seedling | drought_stress_1h | 4.37 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 4.32 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 3.81 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.70 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.63 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 4.67 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 4.16 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 5.70 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 4.78 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 3.03 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 3.12 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.99 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 4.25 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 11.54 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 10.00 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 11.08 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 13.16 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 8.93 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 9.62 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 9.98 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 8.77 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 8.73 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 8.35 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 11.84 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 10.59 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 13.66 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 9.51 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 9.91 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 9.61 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 10.39 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 12.32 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 10.24 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 9.54 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 9.27 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 7.97 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 8.90 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 8.06 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 9.33 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 5.54 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 5.56 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 5.20 | HC |