| SRR4457249 | 2nd_leaf | DAH4 | 12.24 | HC |
| SRR4457250 | 2nd_leaf | DAH4 | 7.94 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 12.16 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 10.30 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 9.98 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 9.78 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 15.23 | HC |
| SRR4457256 | 2nd_leaf | DAH20 | 8.71 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 12.70 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 9.92 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 9.79 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 12.11 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 16.43 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 12.96 | HC |
| SRR4457263 | 2nd_leaf | DAH36 | 11.43 | HC |
| SRR4457264 | 2nd_leaf | DAH44 | 13.91 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 13.68 | HC |
| SRR4457266 | 2nd_leaf | DAH44 | 6.88 | HC |
| SRR358795 | callus | wt | 10.99 | HC |
| SRR6320498 | carpel | wt | 7.55 | HC |
| SRR5560727 | caryopsis | wild_type | 14.79 | HC |
| SRR5560728 | caryopsis | wild_type | 10.89 | HC |
| SRR5560729 | caryopsis | wild_type | 10.72 | HC |
| SRR7265402 | coleoptile | 2dA | 3.92 | HC |
| SRR7265403 | coleoptile | 2dN | 6.03 | HC |
| SRR7265404 | coleoptile | 2dN | 5.42 | HC |
| SRR7265405 | coleoptile | 2dN | 5.80 | HC |
| SRR7265407 | coleoptile | 3dA | 3.27 | HC |
| SRR7265408 | coleoptile | 3dA | 2.97 | HC |
| SRR7265409 | coleoptile | 3dN | 5.16 | HC |
| SRR7265410 | coleoptile | 3dN | 4.96 | HC |
| SRR7265411 | coleoptile | 3dN | 4.89 | HC |
| SRR7265412 | coleoptile | 4dA | 4.10 | HC |
| SRR7265416 | coleoptile | 4dN | 6.42 | HC |
| SRR7265417 | coleoptile | 4dN | 6.36 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 5.44 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 4.27 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 5.11 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 4.17 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 5.30 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 5.65 | HC |
| SRR7265373 | embryo | dry seed 0 h | 5.81 | HC |
| SRR7265374 | embryo | dry seed 0 h | 6.06 | HC |
| SRR7265375 | embryo | dry seed 0 h | 2.52 | HC |
| SRR7265376 | embryo | 1hA | 5.70 | HC |
| SRR7265377 | embryo | 1hA | 5.37 | HC |
| SRR7265378 | embryo | 1hA | 5.36 | HC |
| SRR7265379 | embryo | 1hN | 7.22 | HC |
| SRR7265380 | embryo | 1hN | 5.70 | HC |
| SRR7265381 | embryo | 1hN | 6.32 | HC |
| SRR7265382 | embryo | 3hA | 6.08 | HC |
| SRR7265383 | embryo | 3hA | 5.41 | HC |
| SRR7265384 | embryo | 3hA | 5.25 | HC |
| SRR7265385 | embryo | 3hN | 5.87 | HC |
| SRR7265386 | embryo | 3hN | 6.20 | HC |
| SRR7265387 | embryo | 3hN | 4.86 | HC |
| SRR7265388 | embryo | 12hA | 5.89 | HC |
| SRR7265389 | embryo | 12hA | 6.63 | HC |
| SRR7265390 | embryo | 12hA | 4.96 | HC |
| SRR7265391 | embryo | 12hN | 6.92 | HC |
| SRR7265392 | embryo | 12hN | 5.61 | HC |
| SRR7265393 | embryo | 12hN | 5.60 | HC |
| SRR7265397 | embryo | 24hN | 6.41 | HC |
| SRR7265398 | embryo | 24hN | 6.02 | HC |
| SRR7265399 | embryo | 24hN | 6.58 | HC |
| SRR2338868 | endosprem | high_temperature | 2.79 | HC |
| SRR4457231 | flag_leaf | DAH4 | 6.73 | HC |
| SRR4457232 | flag_leaf | DAH4 | 7.34 | HC |
| SRR4457233 | flag_leaf | DAH4 | 6.83 | HC |
| SRR4457234 | flag_leaf | DAH12 | 5.59 | HC |
| SRR4457235 | flag_leaf | DAH12 | 5.34 | HC |
| SRR4457236 | flag_leaf | DAH12 | 5.41 | HC |
| SRR4457237 | flag_leaf | DAH20 | 5.12 | HC |
| SRR4457238 | flag_leaf | DAH20 | 4.37 | HC |
| SRR4457239 | flag_leaf | DAH20 | 7.18 | HC |
| SRR4457241 | flag_leaf | DAH28 | 5.01 | HC |
| SRR4457242 | flag_leaf | DAH28 | 5.71 | HC |
| SRR4457243 | flag_leaf | DAH36 | 10.87 | HC |
| SRR4457244 | flag_leaf | DAH36 | 8.20 | HC |
| SRR4457245 | flag_leaf | DAH36 | 8.31 | HC |
| SRR4457246 | flag_leaf | DAH44 | 9.04 | HC |
| SRR4457247 | flag_leaf | DAH44 | 8.81 | HC |
| SRR4457248 | flag_leaf | DAH44 | 9.19 | HC |
| SRR1213690 | flower | wt(flower buds) | 6.28 | HC |
| SRR1213691 | flower | wt | 8.53 | HC |
| SRR8060835 | leaf | wild_type | 3.05 | HC |
| SRR8060836 | leaf | wild_type | 3.74 | HC |
| SRR8240824 | leaf | wild_type | 4.63 | HC |
| SRR8240825 | leaf | wild_type | 2.63 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 4.36 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 6.91 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 5.56 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 5.64 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 5.41 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 6.04 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 5.29 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 5.16 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 6.21 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 5.51 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 5.84 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 7.18 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.74 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 6.27 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 8.12 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 6.24 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 5.75 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 5.13 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 5.46 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 5.99 | HC |
| SRR504365 | leaf | wt | 5.25 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 4.17 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 5.00 | HC |
| SRR6417968 | leaf | H2O_control | 4.33 | HC |
| SRR6417969 | leaf | H2O_control | 3.85 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 4.88 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 4.94 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 5.03 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 6.24 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 6.04 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 5.41 | HC |
| SRR8611900 | leaf | Non-inoculated | 3.96 | HC |
| SRR8611902 | leaf | Non-inoculated | 4.99 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 4.81 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 4.54 | HC |
| SRR1213692 | leaf | wt | 6.00 | HC |
| SRR5856933 | leaf | control | 2.73 | HC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 9.60 | HC |
| SRR8582890 | panicle | AM | 2.64 | HC |
| SRR8582893 | panicle | PM | 5.71 | HC |
| SRR5110429 | panicle | Dawn | 12.36 | HC |
| SRR5110430 | panicle | Dawn | 13.12 | HC |
| SRR5110431 | panicle | Dawn | 10.48 | HC |
| SRR5110432 | panicle | Dawn | 7.82 | HC |
| SRR5110433 | panicle | Dawn + 3.5h | 7.68 | HC |
| SRR5110434 | panicle | Dawn + 3.5h | 8.87 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 8.19 | HC |
| SRR5110436 | panicle | Dawn + 3.5h | 5.45 | HC |
| SRR5110437 | panicle | Dawn + 7h | 8.57 | HC |
| SRR5110438 | panicle | Dawn + 7h | 8.28 | HC |
| SRR5110439 | panicle | Dawn + 7h | 9.66 | HC |
| SRR5110440 | panicle | Dawn + 7h | 8.12 | HC |
| SRR5110441 | panicle | Dawn + 10.5h | 7.94 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 10.47 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 7.97 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 12.01 | HC |
| SRR5110445 | panicle | Dusk | 12.03 | HC |
| SRR5110446 | panicle | Dusk | 12.10 | HC |
| SRR5110447 | panicle | Dusk | 12.29 | HC |
| SRR5110448 | panicle | Dusk | 11.36 | HC |
| SRR5110449 | panicle | Dawn + 14h | 12.30 | HC |
| SRR5110450 | panicle | Dawn + 14h | 7.45 | HC |
| SRR5110451 | panicle | Dawn + 14h | 11.38 | HC |
| SRR5110452 | panicle | Dawn + 14h | 13.61 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 7.24 | HC |
| SRR5110454 | panicle | Dawn + 17.5h | 7.80 | HC |
| SRR5110455 | panicle | Dawn + 17.5h | 9.48 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 11.42 | HC |
| SRR5110457 | panicle | Dawn + 21h | 6.32 | HC |
| SRR5110458 | panicle | Dawn + 21h | 7.36 | HC |
| SRR5110459 | panicle | Dawn + 21h | 6.85 | HC |
| SRR5110460 | panicle | Dawn + 21h | 11.32 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 4.67 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 7.79 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 4.80 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 10.54 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 10.24 | HC |
| SRR5126147 | root | "mock,1_day" | 5.65 | HC |
| SRR5126149 | root | "mock,1_day" | 6.02 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 5.58 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 6.90 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 5.22 | HC |
| SRR5126153 | root | "mock,7_days" | 7.03 | HC |
| SRR5126155 | root | "mock,7_days" | 7.88 | HC |
| SRR5126157 | root | "mock,7_days" | 9.39 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 6.66 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 6.44 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 9.16 | HC |
| SRR5126165 | root | "mock,14_days" | 7.22 | HC |
| SRR5126167 | root | "mock,14_days" | 5.86 | HC |
| SRR5126169 | root | "mock,14_days" | 9.89 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 6.50 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 7.55 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 8.82 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 3.07 | HC |
| SRR1213695 | root | wt | 4.22 | HC |
| SRR4947485 | root | Al | 6.33 | HC |
| SRR4947499 | root | Al | 6.23 | HC |
| SRR4947500 | root | Al | 6.00 | HC |
| SRR4947501 | root | Al | 8.38 | HC |
| SRR4947509 | root | Al | 5.78 | HC |
| SRR6502091 | root | 100 mM NaCl | 4.84 | HC |
| SRR6502103 | root | 100 mM NaCl | 5.44 | HC |
| SRR6502104 | root | 100 mM NaCl | 5.72 | HC |
| SRR6502107 | root | control | 4.43 | HC |
| SRR1740435 | root_differentiation_zone | wt | 3.19 | HC |
| SRR1740432 | root_elongation_zone | wt | 6.95 | HC |
| SRR1740433 | root_elongation_zone | wt | 4.23 | HC |
| SRR1740429 | root_meristematic_zone | wt | 5.37 | HC |
| SRR1740430 | root_meristematic_zone | wt | 4.17 | HC |
| SRR2154086 | seedling | wt | 5.14 | HC |
| SRR2154087 | seedling | wt | 4.46 | HC |
| SRR3098741 | seedling | wt | 4.39 | HC |
| SRR3098742 | seedling | wt | 3.04 | HC |
| SRR3098743 | seedling | wt | 3.74 | HC |
| SRR2857719 | seedling | drought_stress_0h | 6.79 | HC |
| SRR2857720 | seedling | drought_stress_1h | 6.03 | HC |
| SRR2857721 | seedling | drought_stress_6h | 3.55 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 7.42 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 3.48 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 4.53 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 3.62 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 5.17 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 3.20 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 3.05 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 3.29 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 6.77 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 4.83 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 5.00 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 5.06 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 5.90 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 5.15 | HC |