| SRR5560727 | caryopsis | wild_type | 19.13 | HC |
| SRR5560728 | caryopsis | wild_type | 21.89 | HC |
| SRR5560729 | caryopsis | wild_type | 12.18 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 17.10 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 15.33 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 7.48 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 7.58 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 4.12 | HC |
| SRR7265373 | embryo | dry seed 0 h | 8.02 | HC |
| SRR7265374 | embryo | dry seed 0 h | 8.54 | HC |
| SRR7265375 | embryo | dry seed 0 h | 2.62 | HC |
| SRR7265376 | embryo | 1hA | 3.73 | HC |
| SRR7265377 | embryo | 1hA | 3.81 | HC |
| SRR7265378 | embryo | 1hA | 4.20 | HC |
| SRR7265379 | embryo | 1hN | 4.97 | HC |
| SRR7265380 | embryo | 1hN | 5.19 | HC |
| SRR7265381 | embryo | 1hN | 4.37 | HC |
| SRR7265391 | embryo | 12hN | 7.34 | HC |
| SRR7265392 | embryo | 12hN | 7.87 | HC |
| SRR7265393 | embryo | 12hN | 7.60 | HC |
| SRR7265397 | embryo | 24hN | 5.86 | HC |
| SRR7265398 | embryo | 24hN | 6.82 | HC |
| SRR7265399 | embryo | 24hN | 6.63 | HC |
| SRR2338866 | endosprem | control | 4.90 | HC |
| SRR2338867 | endosprem | control | 4.98 | HC |
| SRR2338868 | endosprem | high_temperature | 10.13 | HC |
| SRR2338869 | endosprem | high_temperature | 12.25 | HC |
| SRR1213691 | flower | wt | 4.26 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 5.08 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 7.26 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 5.37 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 5.41 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 5.57 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 7.90 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 6.37 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 5.91 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 4.91 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 7.03 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 6.39 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 6.28 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 6.96 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 6.49 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 8.77 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.25 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 7.23 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 8.87 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.61 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 5.94 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 6.56 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 7.30 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 5.71 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 8.22 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 8.26 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 8.22 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 8.26 | HC |
| SRR1761530 | leaf | control | 8.22 | HC |
| SRR1761531 | leaf | control | 8.26 | HC |
| SRR504365 | leaf | wt | 5.10 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 4.70 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 4.74 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 8.33 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 7.38 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 5.42 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 4.59 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 8.95 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 5.82 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 4.77 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 8.68 | HC |
| SRR8611900 | leaf | Non-inoculated | 3.87 | HC |
| SRR8611901 | leaf | Non-inoculated | 4.34 | HC |
| SRR8611902 | leaf | Non-inoculated | 3.78 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 22.13 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 22.72 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 21.06 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 4.96 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 4.95 | HC |
| SRR1213692 | leaf | wt | 6.98 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 5.71 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 9.78 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 8.25 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 4.89 | HC |
| SRR6502102 | leaf | control | 4.73 | HC |
| SRR6168973 | leaf | none (control) | 16.20 | HC |
| SRR6168974 | leaf | none (control) | 18.74 | HC |
| SRR6168975 | leaf | none (control) | 16.13 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 41.00 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 39.55 | HC |
| SRR6168981 | leaf | none (control) | 9.05 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 9.86 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 11.01 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 12.26 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 2.42 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 9.81 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 9.94 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 16.03 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 17.39 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 10.45 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 7.53 | HC |
| SRR1213695 | root | wt | 4.42 | HC |
| SRR6441555 | seedling | wild_type | 3.19 | HC |
| SRR2154086 | seedling | wt | 6.80 | HC |
| SRR2154085 | seedling | wt | 5.88 | HC |
| SRR3098741 | seedling | wt | 8.32 | HC |
| SRR3098742 | seedling | wt | 7.38 | HC |
| SRR3098743 | seedling | wt | 8.66 | HC |
| SRR2857721 | seedling | drought_stress_6h | 5.70 | HC |
| SRR1944583 | seedling | no_treatment | 5.35 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 3.70 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 4.37 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 4.55 | HC |