| SRR4457249 | 2nd_leaf | DAH4 | 7.21 | HC |
| SRR4457250 | 2nd_leaf | DAH4 | 7.51 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 7.09 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 5.66 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 5.14 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 5.24 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 6.64 | HC |
| SRR4457256 | 2nd_leaf | DAH20 | 6.16 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 7.10 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 7.56 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 5.74 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 7.99 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 5.75 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 7.06 | HC |
| SRR4457264 | 2nd_leaf | DAH44 | 7.67 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 4.83 | HC |
| SRR4457266 | 2nd_leaf | DAH44 | 6.62 | HC |
| SRR358795 | callus | wt | 15.69 | HC |
| SRR358796 | callus | wt | 12.40 | HC |
| SRR358797 | callus | wt | 19.39 | HC |
| SRR358798 | callus | wt | 21.18 | HC |
| SRR6320473 | carpel | wt | 19.28 | HC |
| SRR6320498 | carpel | wt | 11.58 | HC |
| SRR5560727 | caryopsis | wild_type | 11.00 | HC |
| SRR5560728 | caryopsis | wild_type | 13.99 | HC |
| SRR5560729 | caryopsis | wild_type | 18.57 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 13.53 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 13.91 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 6.98 | HC |
| SRR4947495 | root | control | 29.68 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 9.30 | HC |
| SRR7265400 | coleoptile | 2dA | 5.62 | HC |
| SRR7265401 | coleoptile | 2dA | 6.02 | HC |
| SRR7265402 | coleoptile | 2dA | 4.95 | HC |
| SRR7265403 | coleoptile | 2dN | 8.14 | HC |
| SRR7265404 | coleoptile | 2dN | 6.78 | HC |
| SRR7265405 | coleoptile | 2dN | 6.59 | HC |
| SRR7265406 | coleoptile | 3dA | 3.68 | HC |
| SRR7265407 | coleoptile | 3dA | 4.23 | HC |
| SRR7265409 | coleoptile | 3dN | 6.55 | HC |
| SRR7265410 | coleoptile | 3dN | 5.72 | HC |
| SRR7265411 | coleoptile | 3dN | 5.75 | HC |
| SRR7265415 | coleoptile | 4dN | 5.89 | HC |
| SRR7265416 | coleoptile | 4dN | 5.36 | HC |
| SRR7265417 | coleoptile | 4dN | 5.42 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 4.50 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 5.22 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 13.73 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 32.34 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 31.02 | HC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 24.02 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 16.95 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 9.79 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 39.21 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 42.01 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 14.40 | HC |
| SRR7265388 | embryo | 12hA | 7.88 | HC |
| SRR7265389 | embryo | 12hA | 8.23 | HC |
| SRR7265390 | embryo | 12hA | 8.75 | HC |
| SRR7265391 | embryo | 12hN | 10.31 | HC |
| SRR7265392 | embryo | 12hN | 8.38 | HC |
| SRR7265393 | embryo | 12hN | 10.17 | HC |
| SRR7265394 | embryo | 24hA | 5.82 | HC |
| SRR7265395 | embryo | 24hA | 6.34 | HC |
| SRR7265396 | embryo | 24hA | 6.00 | HC |
| SRR7265397 | embryo | 24hN | 9.86 | HC |
| SRR7265398 | embryo | 24hN | 9.46 | HC |
| SRR7265399 | embryo | 24hN | 9.17 | HC |
| SRR2338869 | endosprem | high_temperature | 4.11 | HC |
| SRR4457231 | flag_leaf | DAH4 | 4.96 | HC |
| SRR4457232 | flag_leaf | DAH4 | 5.67 | HC |
| SRR4457233 | flag_leaf | DAH4 | 5.97 | HC |
| SRR4457234 | flag_leaf | DAH12 | 4.36 | HC |
| SRR4457235 | flag_leaf | DAH12 | 4.76 | HC |
| SRR4457236 | flag_leaf | DAH12 | 4.46 | HC |
| SRR4457237 | flag_leaf | DAH20 | 5.69 | HC |
| SRR4457238 | flag_leaf | DAH20 | 5.39 | HC |
| SRR4457239 | flag_leaf | DAH20 | 6.02 | HC |
| SRR4457240 | flag_leaf | DAH28 | 7.72 | HC |
| SRR4457241 | flag_leaf | DAH28 | 8.32 | HC |
| SRR4457242 | flag_leaf | DAH28 | 5.92 | HC |
| SRR4457243 | flag_leaf | DAH36 | 5.55 | HC |
| SRR4457244 | flag_leaf | DAH36 | 5.06 | HC |
| SRR4457245 | flag_leaf | DAH36 | 5.34 | HC |
| SRR4457246 | flag_leaf | DAH44 | 6.18 | HC |
| SRR4457248 | flag_leaf | DAH44 | 7.32 | HC |
| SRR1213690 | flower | wt(flower buds) | 9.15 | HC |
| SRR1213691 | flower | wt | 10.43 | HC |
| SRR8240818 | leaf | wild_type | 2.57 | HC |
| SRR8240819 | leaf | wild_type | 4.51 | HC |
| SRR8240820 | leaf | wild_type | 3.17 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 4.90 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 5.03 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 5.09 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 6.78 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 4.28 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 4.53 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 3.76 | HC |
| SRR504365 | leaf | wt | 4.58 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 5.18 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 5.01 | HC |
| SRR1213692 | leaf | wt | 4.50 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 9.62 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 12.65 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 13.70 | HC |
| SRR6502088 | leaf | control | 14.36 | HC |
| SRR6502089 | leaf | control | 10.92 | HC |
| SRR6502090 | leaf | control | 12.13 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 9.41 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 11.37 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 9.38 | HC |
| SRR6502100 | leaf | control | 12.10 | HC |
| SRR6502101 | leaf | control | 10.97 | HC |
| SRR6502102 | leaf | control | 9.93 | HC |
| SRR5856933 | leaf | control | 3.44 | HC |
| SRR5856934 | leaf | control | 2.46 | HC |
| SRR5856935 | leaf | control | 3.17 | HC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 13.75 | HC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 18.13 | HC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 12.98 | HC |
| SRR6053395 | leaf | gibberellic acid (GA) | 14.18 | HC |
| SRR6053396 | leaf | gibberellic acid (GA) | 18.45 | HC |
| SRR6053397 | leaf | gibberellic acid (GA) | 21.08 | HC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 13.23 | HC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 9.67 | HC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 9.08 | HC |
| SRR6168974 | leaf | none (control) | 5.27 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 18.20 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 14.59 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 3.69 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 5.44 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 6.65 | HC |
| SRR5110429 | panicle | Dawn | 44.75 | HC |
| SRR5110430 | panicle | Dawn | 37.38 | HC |
| SRR5110431 | panicle | Dawn | 36.39 | HC |
| SRR5110432 | panicle | Dawn | 35.98 | HC |
| SRR4947496 | root | control | 14.53 | HC |
| SRR5110433 | panicle | Dawn + 3.5h | 36.39 | HC |
| SRR5110434 | panicle | Dawn + 3.5h | 32.70 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 30.14 | HC |
| SRR5110436 | panicle | Dawn + 3.5h | 26.38 | HC |
| SRR5110437 | panicle | Dawn + 7h | 42.30 | HC |
| SRR5110438 | panicle | Dawn + 7h | 44.11 | HC |
| SRR5110439 | panicle | Dawn + 7h | 32.61 | HC |
| SRR5110440 | panicle | Dawn + 7h | 39.65 | HC |
| SRR5110441 | panicle | Dawn + 10.5h | 38.43 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 40.77 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 38.45 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 46.18 | HC |
| SRR5110445 | panicle | Dusk | 40.61 | HC |
| SRR5110446 | panicle | Dusk | 47.01 | HC |
| SRR5110447 | panicle | Dusk | 45.98 | HC |
| SRR5110448 | panicle | Dusk | 54.50 | HC |
| SRR5110449 | panicle | Dawn + 14h | 42.72 | HC |
| SRR5110450 | panicle | Dawn + 14h | 27.87 | HC |
| SRR5110451 | panicle | Dawn + 14h | 38.43 | HC |
| SRR5110452 | panicle | Dawn + 14h | 48.66 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 32.06 | HC |
| SRR5110454 | panicle | Dawn + 17.5h | 26.03 | HC |
| SRR5110455 | panicle | Dawn + 17.5h | 26.59 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 46.02 | HC |
| SRR5110457 | panicle | Dawn + 21h | 28.74 | HC |
| SRR5110458 | panicle | Dawn + 21h | 21.32 | HC |
| SRR5110459 | panicle | Dawn + 21h | 35.18 | HC |
| SRR5110460 | panicle | Dawn + 21h | 38.85 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 5.88 | HC |
| SRR1633182 | panicle | WT | 13.24 | HC |
| SRR1633185 | panicle | WT | 26.68 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 8.47 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 8.84 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 13.77 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 13.29 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 20.00 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 19.76 | HC |
| SRR5126147 | root | "mock,1_day" | 10.17 | HC |
| SRR5126148 | root | "mock,1_day" | 12.25 | HC |
| SRR5126149 | root | "mock,1_day" | 9.15 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 11.41 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 9.86 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 11.87 | HC |
| SRR5126153 | root | "mock,7_days" | 9.33 | HC |
| SRR5126155 | root | "mock,7_days" | 9.63 | HC |
| SRR5126157 | root | "mock,7_days" | 7.35 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 7.81 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 7.06 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 11.51 | HC |
| SRR5126165 | root | "mock,14_days" | 7.61 | HC |
| SRR5126167 | root | "mock,14_days" | 6.07 | HC |
| SRR5126169 | root | "mock,14_days" | 8.36 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 8.05 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 8.43 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 7.42 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 5.65 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 3.11 | HC |
| SRR1213694 | root | wt | 3.85 | HC |
| SRR4947478 | root | control | 29.84 | HC |
| SRR4947479 | root | control | 28.40 | HC |
| SRR4947480 | root | control | 15.61 | HC |
| SRR4947481 | root | control | 18.91 | HC |
| SRR4947482 | root | Al | 20.49 | HC |
| SRR4947483 | root | Al | 27.12 | HC |
| SRR4947484 | root | Al | 18.88 | HC |
| SRR4947485 | root | Al | 18.49 | HC |
| SRR4947487 | root | control | 30.58 | HC |
| SRR4947488 | root | control | 14.34 | HC |
| SRR4947489 | root | control | 16.75 | HC |
| SRR4947490 | root | Al | 28.91 | HC |
| SRR4947491 | root | Al | 38.57 | HC |
| SRR4947492 | root | Al | 18.57 | HC |
| SRR4947493 | root | Al | 15.63 | HC |
| SRR4947494 | root | control | 24.31 | HC |
| SRR4947497 | root | control | 14.49 | HC |
| SRR4947498 | root | Al | 42.11 | HC |
| SRR4947499 | root | Al | 33.83 | HC |
| SRR4947500 | root | Al | 15.98 | HC |
| SRR4947501 | root | Al | 21.97 | HC |
| SRR4947502 | root | control | 35.34 | HC |
| SRR4947503 | root | control | 28.92 | HC |
| SRR4947504 | root | control | 17.91 | HC |
| SRR4947505 | root | control | 15.52 | HC |
| SRR4947506 | root | Al | 25.11 | HC |
| SRR4947507 | root | Al | 43.61 | HC |
| SRR4947508 | root | Al | 16.15 | HC |
| SRR4947509 | root | Al | 17.48 | HC |
| SRR6502091 | root | 100 mM NaCl | 25.89 | HC |
| SRR6502092 | root | 100 mM NaCl | 25.11 | HC |
| SRR6502093 | root | 100 mM NaCl | 24.40 | HC |
| SRR6502094 | root | control | 17.40 | HC |
| SRR6502095 | root | control | 18.48 | HC |
| SRR6502096 | root | control | 17.45 | HC |
| SRR6502103 | root | 100 mM NaCl | 22.62 | HC |
| SRR6502104 | root | 100 mM NaCl | 24.77 | HC |
| SRR6502105 | root | 100 mM NaCl | 21.47 | HC |
| SRR6502106 | root | control | 17.38 | HC |
| SRR6502107 | root | control | 16.92 | HC |
| SRR6502108 | root | control | 22.07 | HC |
| SRR1740434 | root_differentiation_zone | wt | 4.62 | HC |
| SRR1740435 | root_differentiation_zone | wt | 6.00 | HC |
| SRR1740436 | root_differentiation_zone | wt | 12.01 | HC |
| SRR1740431 | root_elongation_zone | wt | 7.37 | HC |
| SRR1740432 | root_elongation_zone | wt | 15.14 | HC |
| SRR1740433 | root_elongation_zone | wt | 14.75 | HC |
| SRR1740428 | root_meristematic_zone | wt | 10.29 | HC |
| SRR1740429 | root_meristematic_zone | wt | 12.51 | HC |
| SRR1740430 | root_meristematic_zone | wt | 15.67 | HC |
| SRR6441554 | seedling | wild_type | 4.36 | HC |
| SRR2154086 | seedling | wt | 5.46 | HC |
| SRR2154082 | seedling | wt | 23.48 | HC |
| SRR2154085 | seedling | wt | 12.94 | HC |
| SRR2857719 | seedling | drought_stress_0h | 5.87 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 4.21 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 19.67 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 20.91 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 20.79 | HC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 13.05 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 25.48 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 12.60 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 14.94 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 21.02 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 13.87 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 16.85 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 22.53 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 20.09 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 17.30 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 17.43 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 19.57 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 14.38 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 15.08 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 17.78 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 18.68 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 25.44 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 14.56 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 15.68 | HC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 16.24 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 9.45 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 14.86 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 17.32 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 17.62 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 13.29 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 12.84 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 12.40 | HC |
| SRR1617559 | shoot_apical_meristem | no collect | 16.03 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 15.75 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 15.12 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 13.36 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 19.81 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 14.40 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 16.55 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 11.51 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 9.18 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 10.65 | HC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 97.55 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 89.86 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 57.17 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 60.97 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 68.75 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 59.93 | HC |