| SRR7265412 | coleoptile | 4dA | 23.27 | HC |
| SRR7265413 | coleoptile | 4dA | 25.50 | HC |
| SRR7265414 | coleoptile | 4dA | 26.74 | HC |
| SRR2338869 | endosprem | high_temperature | 3.64 | HC |
| SRR1213691 | flower | wt | 8.92 | HC |
| SRR8240824 | leaf | wild_type | 64.11 | HC |
| SRR8240825 | leaf | wild_type | 32.08 | HC |
| SRR8240826 | leaf | wild_type | 9.90 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 57.01 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 77.56 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 150.19 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 93.81 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 516.42 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 177.39 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 433.09 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 431.77 | HC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 169.70 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 383.58 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 434.55 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 284.57 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 204.00 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 44.63 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 330.90 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 491.11 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 213.79 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 248.40 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 279.63 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 524.69 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 135.07 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 812.36 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 642.76 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 122.59 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 385.03 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 296.57 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 172.17 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 224.19 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 520.52 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 566.74 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 491.70 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 384.38 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 785.32 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 372.21 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 521.91 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 159.61 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 298.40 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 264.32 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 268.48 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 598.32 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 18.70 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 114.96 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 59.34 | HC |
| SRR6417967 | leaf | H2O_control | 208.30 | HC |
| SRR6417968 | leaf | H2O_control | 367.64 | HC |
| SRR6417969 | leaf | H2O_control | 160.11 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 7.76 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 16.26 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 56.34 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 35.50 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 9.73 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 7.88 | HC |
| SRR8611902 | leaf | Non-inoculated | 3.94 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 132.48 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 125.77 | HC |
| SRR1213692 | leaf | wt | 611.34 | HC |
| SRR1213693 | leaf | wt | 30.07 | HC |
| SRR6502088 | leaf | control | 8.86 | HC |
| SRR6502089 | leaf | control | 31.38 | HC |
| SRR6502090 | leaf | control | 6.22 | HC |
| SRR6502100 | leaf | control | 101.59 | HC |
| SRR6502101 | leaf | control | 8.30 | HC |
| SRR6502102 | leaf | control | 6.02 | HC |
| SRR5856927 | leaf | control | 2.81 | HC |
| SRR5856928 | leaf | control | 4.44 | HC |
| SRR5856929 | leaf | control | 4.24 | HC |
| SRR5856930 | leaf | salt | 5.90 | HC |
| SRR5856931 | leaf | salt | 4.25 | HC |
| SRR5856932 | leaf | salt | 3.92 | HC |
| SRR5856936 | leaf | salt | 4.61 | HC |
| SRR5856937 | leaf | salt | 5.48 | HC |
| SRR5856938 | leaf | salt | 3.59 | HC |
| SRR6053395 | leaf | gibberellic acid (GA) | 11.34 | HC |
| SRR6053396 | leaf | gibberellic acid (GA) | 10.60 | HC |
| SRR6053397 | leaf | gibberellic acid (GA) | 9.18 | HC |
| SRR6168973 | leaf | none (control) | 11.18 | HC |
| SRR6168974 | leaf | none (control) | 56.96 | HC |
| SRR6168975 | leaf | none (control) | 13.60 | HC |
| SRR6168979 | leaf | none (control) | 6.26 | HC |
| SRR6168981 | leaf | none (control) | 4.30 | HC |
| SRR8582891 | panicle | PM | 49.90 | HC |
| SRR8582892 | panicle | PM | 40.41 | HC |
| SRR1633185 | panicle | WT | 6.94 | HC |
| SRR5126147 | root | "mock,1_day" | 14.05 | HC |
| SRR5126148 | root | "mock,1_day" | 17.34 | HC |
| SRR5126149 | root | "mock,1_day" | 5.65 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 21.12 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 5.28 | HC |
| SRR5126153 | root | "mock,7_days" | 16.63 | HC |
| SRR5126165 | root | "mock,14_days" | 151.72 | HC |
| SRR5126167 | root | "mock,14_days" | 26.74 | HC |
| SRR5126169 | root | "mock,14_days" | 27.44 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 12.18 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 46.64 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 11.25 | HC |
| SRR1213694 | root | wt | 11.06 | HC |
| SRR4947485 | root | Al | 5.74 | HC |
| SRR6502094 | root | control | 141.84 | HC |
| SRR6502095 | root | control | 246.26 | HC |
| SRR6502096 | root | control | 173.94 | HC |
| SRR6502104 | root | 100 mM NaCl | 6.07 | HC |
| SRR6502106 | root | control | 303.96 | HC |
| SRR6502107 | root | control | 196.14 | HC |
| SRR6502108 | root | control | 106.37 | HC |
| SRR3098742 | seedling | wt | 15.77 | HC |
| SRR2857719 | seedling | drought_stress_0h | 183.41 | HC |
| SRR2857720 | seedling | drought_stress_1h | 110.96 | HC |
| SRR2857721 | seedling | drought_stress_6h | 18.90 | HC |
| SRR358791 | seedling | wt | 50.99 | HC |
| SRR358792 | seedling | wt | 55.72 | HC |
| SRR358793 | seedling | wt | 40.20 | HC |
| SRR358794 | seedling | wt | 40.29 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 13.38 | HC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 7.69 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 10.09 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 20.82 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 36.47 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 37.09 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 8.04 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 48.21 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 43.47 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 20.17 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 45.79 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 5.00 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 27.80 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 33.85 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 19.75 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 14.92 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 4.79 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 5.57 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 23.54 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 4.30 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 39.02 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 43.28 | HC |