| SRR4457249 | 2nd_leaf | DAH4 | 33.97 | HC |
| SRR4457250 | 2nd_leaf | DAH4 | 29.14 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 32.10 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 50.22 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 49.89 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 39.74 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 43.15 | HC |
| SRR4457256 | 2nd_leaf | DAH20 | 38.00 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 39.98 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 52.36 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 48.36 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 42.90 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 50.43 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 55.56 | HC |
| SRR4457263 | 2nd_leaf | DAH36 | 37.59 | HC |
| SRR4457264 | 2nd_leaf | DAH44 | 44.79 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 37.58 | HC |
| SRR4457266 | 2nd_leaf | DAH44 | 55.74 | HC |
| SRR358795 | callus | wt | 13.65 | HC |
| SRR358796 | callus | wt | 12.19 | HC |
| SRR358797 | callus | wt | 13.48 | HC |
| SRR358798 | callus | wt | 14.29 | HC |
| SRR5560727 | caryopsis | wild_type | 49.05 | HC |
| SRR5560728 | caryopsis | wild_type | 35.63 | HC |
| SRR5560729 | caryopsis | wild_type | 29.62 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 22.97 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 23.27 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 17.15 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 31.38 | HC |
| SRR2338868 | endosprem | high_temperature | 2.68 | HC |
| SRR976168 | flag_leaf | wild_type | 11.61 | HC |
| SRR4457231 | flag_leaf | DAH4 | 29.00 | HC |
| SRR4457232 | flag_leaf | DAH4 | 36.65 | HC |
| SRR4457233 | flag_leaf | DAH4 | 40.12 | HC |
| SRR4457234 | flag_leaf | DAH12 | 38.39 | HC |
| SRR4457235 | flag_leaf | DAH12 | 39.59 | HC |
| SRR4457236 | flag_leaf | DAH12 | 41.62 | HC |
| SRR4457237 | flag_leaf | DAH20 | 41.60 | HC |
| SRR4457238 | flag_leaf | DAH20 | 38.83 | HC |
| SRR4457239 | flag_leaf | DAH20 | 40.89 | HC |
| SRR4457240 | flag_leaf | DAH28 | 51.54 | HC |
| SRR4457241 | flag_leaf | DAH28 | 43.67 | HC |
| SRR4457242 | flag_leaf | DAH28 | 40.50 | HC |
| SRR4457243 | flag_leaf | DAH36 | 54.36 | HC |
| SRR4457244 | flag_leaf | DAH36 | 48.49 | HC |
| SRR4457245 | flag_leaf | DAH36 | 52.85 | HC |
| SRR4457246 | flag_leaf | DAH44 | 53.46 | HC |
| SRR4457247 | flag_leaf | DAH44 | 44.50 | HC |
| SRR4457248 | flag_leaf | DAH44 | 47.23 | HC |
| SRR1213690 | flower | wt(flower buds) | 11.34 | HC |
| SRR1213691 | flower | wt | 11.81 | HC |
| SRR8240824 | leaf | wild_type | 24.83 | HC |
| SRR8240825 | leaf | wild_type | 24.27 | HC |
| SRR8240826 | leaf | wild_type | 22.08 | HC |
| SRR8240818 | leaf | wild_type | 11.38 | HC |
| SRR8240819 | leaf | wild_type | 16.89 | HC |
| SRR8240820 | leaf | wild_type | 17.19 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 17.89 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 20.58 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 20.75 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 21.49 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 36.24 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 18.53 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 23.46 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 18.03 | HC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 17.65 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 17.68 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 25.80 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 18.89 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 16.13 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 40.14 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 27.25 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 19.10 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 20.60 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 19.59 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 14.44 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 27.11 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 16.65 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 20.80 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 31.32 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 18.30 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 18.75 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 44.62 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 23.16 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 17.40 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 30.34 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 19.32 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 16.96 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 21.04 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 26.90 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 16.72 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 24.62 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 16.01 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 15.96 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 34.17 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 43.98 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 34.95 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 23.47 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 32.83 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 44.49 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 43.17 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 23.47 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 32.83 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 44.49 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 43.18 | HC |
| SRR1761528 | leaf | drought | 23.47 | HC |
| SRR1761529 | leaf | drought | 32.83 | HC |
| SRR1761530 | leaf | control | 44.49 | HC |
| SRR1761531 | leaf | control | 43.17 | HC |
| SRR504365 | leaf | wt | 40.41 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 18.63 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 9.91 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 17.52 | HC |
| SRR6417967 | leaf | H2O_control | 19.58 | HC |
| SRR6417968 | leaf | H2O_control | 16.47 | HC |
| SRR6417969 | leaf | H2O_control | 26.57 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 26.98 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 28.03 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 29.67 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 29.16 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 25.81 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 29.52 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 39.70 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 28.68 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 19.25 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 25.67 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 22.84 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 38.32 | HC |
| SRR8611900 | leaf | Non-inoculated | 23.37 | HC |
| SRR8611901 | leaf | Non-inoculated | 22.68 | HC |
| SRR8611902 | leaf | Non-inoculated | 21.43 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 5.70 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 7.64 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 7.69 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 17.34 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 18.64 | HC |
| SRR1213692 | leaf | wt | 38.76 | HC |
| SRR1213693 | leaf | wt | 17.89 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 44.48 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 35.49 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 43.97 | HC |
| SRR6502088 | leaf | control | 31.50 | HC |
| SRR6502089 | leaf | control | 34.19 | HC |
| SRR6502090 | leaf | control | 33.94 | HC |
| SRR6168973 | leaf | none (control) | 20.15 | HC |
| SRR6168974 | leaf | none (control) | 17.38 | HC |
| SRR6168975 | leaf | none (control) | 23.68 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 17.05 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 11.03 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 23.93 | HC |
| SRR6168979 | leaf | none (control) | 5.53 | HC |
| SRR6168980 | leaf | none (control) | 7.24 | HC |
| SRR6168981 | leaf | none (control) | 5.38 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 5.97 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 9.21 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 9.55 | HC |
| SRR8582888 | panicle | AM | 10.68 | HC |
| SRR8582889 | panicle | AM | 9.01 | HC |
| SRR8582890 | panicle | AM | 12.08 | HC |
| SRR8582891 | panicle | PM | 22.07 | HC |
| SRR8582892 | panicle | PM | 24.96 | HC |
| SRR8582893 | panicle | PM | 27.44 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 4.23 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 7.75 | HC |
| SRR5126147 | root | "mock,1_day" | 9.65 | HC |
| SRR5126148 | root | "mock,1_day" | 6.36 | HC |
| SRR5126149 | root | "mock,1_day" | 13.03 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 10.27 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 12.84 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 10.82 | HC |
| SRR5126153 | root | "mock,7_days" | 5.98 | HC |
| SRR5126155 | root | "mock,7_days" | 9.36 | HC |
| SRR5126157 | root | "mock,7_days" | 17.30 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 9.49 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 10.78 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 11.48 | HC |
| SRR5126165 | root | "mock,14_days" | 7.54 | HC |
| SRR5126167 | root | "mock,14_days" | 7.26 | HC |
| SRR5126169 | root | "mock,14_days" | 14.77 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 9.38 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 9.88 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 9.88 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 3.58 | HC |
| SRR1213694 | root | wt | 3.56 | HC |
| SRR1213695 | root | wt | 22.91 | HC |
| SRR6502091 | root | 100 mM NaCl | 5.95 | HC |
| SRR6502092 | root | 100 mM NaCl | 6.54 | HC |
| SRR6502093 | root | 100 mM NaCl | 6.50 | HC |
| SRR6441554 | seedling | wild_type | 15.76 | HC |
| SRR6441555 | seedling | wild_type | 14.26 | HC |
| SRR2154086 | seedling | wt | 20.87 | HC |
| SRR2154084 | seedling | wt | 20.67 | HC |
| SRR2154087 | seedling | wt | 22.89 | HC |
| SRR3098741 | seedling | wt | 24.50 | HC |
| SRR3098742 | seedling | wt | 33.95 | HC |
| SRR3098743 | seedling | wt | 30.03 | HC |
| SRR2857719 | seedling | drought_stress_0h | 10.87 | HC |
| SRR2857720 | seedling | drought_stress_1h | 14.10 | HC |
| SRR2857721 | seedling | drought_stress_6h | 15.77 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 19.36 | HC |
| SRR1944583 | seedling | no_treatment | 21.55 | HC |
| SRR358791 | seedling | wt | 20.02 | HC |
| SRR358792 | seedling | wt | 21.77 | HC |
| SRR358793 | seedling | wt | 11.31 | HC |
| SRR358794 | seedling | wt | 10.84 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 12.42 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 10.16 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 10.87 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 13.61 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 14.47 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 11.66 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 6.92 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 13.62 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 14.99 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 9.59 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 10.73 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 9.60 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 12.57 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 8.04 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 7.97 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 16.90 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 16.31 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 14.34 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 13.62 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 13.46 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 17.99 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 26.15 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 24.55 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 25.49 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 24.36 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 23.34 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 22.53 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 27.61 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 29.89 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 37.24 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 41.12 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 17.66 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 18.87 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 15.85 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 14.01 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 14.18 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 11.13 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 30.43 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 34.77 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 39.07 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 38.97 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 12.81 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 12.13 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 14.19 | HC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 18.50 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 18.00 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 12.90 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 13.90 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 12.78 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 12.31 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 11.46 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 12.06 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 12.27 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 9.86 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 13.81 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 7.96 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 14.11 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 13.43 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 12.64 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 16.23 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 14.24 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 15.25 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 8.18 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 9.47 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 8.75 | HC |