| SRR4457249 | 2nd_leaf | DAH4 | 49.66 | HC |
| SRR4457250 | 2nd_leaf | DAH4 | 34.07 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 48.22 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 35.90 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 31.01 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 29.94 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 26.91 | HC |
| SRR4457256 | 2nd_leaf | DAH20 | 23.84 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 29.72 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 24.58 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 27.07 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 33.93 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 47.18 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 33.84 | HC |
| SRR4457263 | 2nd_leaf | DAH36 | 59.48 | HC |
| SRR4457264 | 2nd_leaf | DAH44 | 33.83 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 51.40 | HC |
| SRR4457266 | 2nd_leaf | DAH44 | 20.85 | HC |
| SRR3745125 | anther | wt | 22.69 | HC |
| SRR3745126 | anther | wt | 28.54 | HC |
| SRR3745127 | anther | wt | 29.17 | HC |
| SRR358795 | callus | wt | 33.44 | HC |
| SRR358796 | callus | wt | 27.88 | HC |
| SRR358797 | callus | wt | 37.20 | HC |
| SRR358798 | callus | wt | 26.48 | HC |
| SRR6320473 | carpel | wt | 17.77 | HC |
| SRR6320498 | carpel | wt | 10.65 | HC |
| SRR5560727 | caryopsis | wild_type | 92.38 | HC |
| SRR5560728 | caryopsis | wild_type | 81.98 | HC |
| SRR5560729 | caryopsis | wild_type | 84.17 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 28.03 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 22.34 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 21.04 | HC |
| SRR4947495 | root | control | 20.09 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 30.79 | HC |
| SRR7265400 | coleoptile | 2dA | 24.44 | HC |
| SRR7265401 | coleoptile | 2dA | 24.26 | HC |
| SRR7265402 | coleoptile | 2dA | 23.55 | HC |
| SRR7265403 | coleoptile | 2dN | 21.81 | HC |
| SRR7265404 | coleoptile | 2dN | 19.83 | HC |
| SRR7265405 | coleoptile | 2dN | 21.40 | HC |
| SRR7265406 | coleoptile | 3dA | 20.66 | HC |
| SRR7265407 | coleoptile | 3dA | 21.17 | HC |
| SRR7265408 | coleoptile | 3dA | 11.09 | HC |
| SRR7265409 | coleoptile | 3dN | 21.80 | HC |
| SRR7265410 | coleoptile | 3dN | 18.72 | HC |
| SRR7265411 | coleoptile | 3dN | 17.07 | HC |
| SRR7265412 | coleoptile | 4dA | 19.21 | HC |
| SRR7265413 | coleoptile | 4dA | 29.37 | HC |
| SRR7265414 | coleoptile | 4dA | 32.59 | HC |
| SRR7265415 | coleoptile | 4dN | 23.93 | HC |
| SRR7265416 | coleoptile | 4dN | 18.62 | HC |
| SRR7265417 | coleoptile | 4dN | 18.11 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 28.05 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 21.51 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 23.35 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 60.50 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 53.19 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 21.49 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 35.45 | HC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 25.89 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 26.37 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 26.87 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 40.60 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 23.71 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 17.29 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 27.15 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 22.50 | HC |
| SRR7265373 | embryo | dry seed 0 h | 25.19 | HC |
| SRR7265374 | embryo | dry seed 0 h | 31.91 | HC |
| SRR7265375 | embryo | dry seed 0 h | 11.72 | HC |
| SRR7265376 | embryo | 1hA | 18.39 | HC |
| SRR7265377 | embryo | 1hA | 23.46 | HC |
| SRR7265378 | embryo | 1hA | 23.90 | HC |
| SRR7265379 | embryo | 1hN | 28.57 | HC |
| SRR7265380 | embryo | 1hN | 20.82 | HC |
| SRR7265381 | embryo | 1hN | 25.57 | HC |
| SRR7265382 | embryo | 3hA | 24.63 | HC |
| SRR7265383 | embryo | 3hA | 21.80 | HC |
| SRR7265384 | embryo | 3hA | 18.60 | HC |
| SRR7265385 | embryo | 3hN | 25.61 | HC |
| SRR7265386 | embryo | 3hN | 24.65 | HC |
| SRR7265387 | embryo | 3hN | 24.60 | HC |
| SRR7265388 | embryo | 12hA | 19.14 | HC |
| SRR7265389 | embryo | 12hA | 20.99 | HC |
| SRR7265390 | embryo | 12hA | 21.95 | HC |
| SRR7265391 | embryo | 12hN | 19.29 | HC |
| SRR7265392 | embryo | 12hN | 13.09 | HC |
| SRR7265393 | embryo | 12hN | 16.07 | HC |
| SRR7265394 | embryo | 24hA | 19.74 | HC |
| SRR7265395 | embryo | 24hA | 24.85 | HC |
| SRR7265396 | embryo | 24hA | 22.90 | HC |
| SRR7265397 | embryo | 24hN | 21.04 | HC |
| SRR7265398 | embryo | 24hN | 19.66 | HC |
| SRR7265399 | embryo | 24hN | 18.74 | HC |
| SRR2338866 | endosprem | control | 24.49 | HC |
| SRR2338867 | endosprem | control | 17.01 | HC |
| SRR2338868 | endosprem | high_temperature | 15.80 | HC |
| SRR2338869 | endosprem | high_temperature | 17.28 | HC |
| SRR976168 | flag_leaf | wild_type | 19.54 | HC |
| SRR4457231 | flag_leaf | DAH4 | 29.76 | HC |
| SRR4457232 | flag_leaf | DAH4 | 25.73 | HC |
| SRR4457233 | flag_leaf | DAH4 | 25.90 | HC |
| SRR4457234 | flag_leaf | DAH12 | 28.70 | HC |
| SRR4457235 | flag_leaf | DAH12 | 25.00 | HC |
| SRR4457236 | flag_leaf | DAH12 | 19.47 | HC |
| SRR4457237 | flag_leaf | DAH20 | 20.56 | HC |
| SRR4457238 | flag_leaf | DAH20 | 22.20 | HC |
| SRR4457239 | flag_leaf | DAH20 | 16.28 | HC |
| SRR4457240 | flag_leaf | DAH28 | 16.18 | HC |
| SRR4457241 | flag_leaf | DAH28 | 16.58 | HC |
| SRR4457242 | flag_leaf | DAH28 | 22.64 | HC |
| SRR4457243 | flag_leaf | DAH36 | 32.47 | HC |
| SRR4457244 | flag_leaf | DAH36 | 23.68 | HC |
| SRR4457245 | flag_leaf | DAH36 | 29.06 | HC |
| SRR4457246 | flag_leaf | DAH44 | 21.35 | HC |
| SRR4457247 | flag_leaf | DAH44 | 35.68 | HC |
| SRR4457248 | flag_leaf | DAH44 | 17.66 | HC |
| SRR1213690 | flower | wt(flower buds) | 36.54 | HC |
| SRR1213691 | flower | wt | 36.47 | HC |
| SRR8060835 | leaf | wild_type | 12.73 | HC |
| SRR8060836 | leaf | wild_type | 6.98 | HC |
| SRR8060837 | leaf | wild_type | 12.02 | HC |
| SRR8240824 | leaf | wild_type | 5.42 | HC |
| SRR8240825 | leaf | wild_type | 4.42 | HC |
| SRR8240826 | leaf | wild_type | 4.50 | HC |
| SRR8240818 | leaf | wild_type | 6.17 | HC |
| SRR8240819 | leaf | wild_type | 12.24 | HC |
| SRR8240820 | leaf | wild_type | 9.79 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 21.21 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 19.38 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 26.78 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 23.60 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 49.38 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 53.88 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 62.51 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 57.99 | HC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 62.50 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 62.59 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 42.99 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 52.71 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 67.37 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 55.45 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 53.78 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 69.30 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 56.39 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 50.64 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 69.41 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 41.98 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 46.66 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 42.62 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 40.96 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 45.27 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 60.05 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 40.66 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 58.35 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 67.22 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 52.03 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 64.62 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 64.70 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 65.55 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 63.14 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 66.75 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 54.44 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 59.31 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 53.63 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 45.36 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 47.61 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 51.64 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 45.54 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 44.82 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 34.49 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 34.26 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 45.54 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 44.82 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 34.49 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 34.26 | HC |
| SRR1761528 | leaf | drought | 45.53 | HC |
| SRR1761529 | leaf | drought | 44.82 | HC |
| SRR1761530 | leaf | control | 34.49 | HC |
| SRR1761531 | leaf | control | 34.26 | HC |
| SRR504365 | leaf | wt | 36.32 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 41.98 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 40.12 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 30.92 | HC |
| SRR6417967 | leaf | H2O_control | 22.96 | HC |
| SRR6417968 | leaf | H2O_control | 25.07 | HC |
| SRR6417969 | leaf | H2O_control | 34.22 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 27.85 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 21.69 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 74.13 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 66.87 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 24.85 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 28.28 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 55.10 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 56.20 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 23.04 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 88.85 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 28.79 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 53.87 | HC |
| SRR8611900 | leaf | Non-inoculated | 70.06 | HC |
| SRR8611901 | leaf | Non-inoculated | 72.21 | HC |
| SRR8611902 | leaf | Non-inoculated | 79.73 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 94.15 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 80.37 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 89.57 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 30.46 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 33.73 | HC |
| SRR1213692 | leaf | wt | 25.47 | HC |
| SRR1213693 | leaf | wt | 42.39 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 19.05 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 28.96 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 36.36 | HC |
| SRR6502088 | leaf | control | 12.74 | HC |
| SRR6502089 | leaf | control | 11.03 | HC |
| SRR6502090 | leaf | control | 17.84 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 12.89 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 13.00 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 21.44 | HC |
| SRR6502100 | leaf | control | 8.90 | HC |
| SRR6502101 | leaf | control | 6.71 | HC |
| SRR6502102 | leaf | control | 10.35 | HC |
| SRR5856927 | leaf | control | 16.06 | HC |
| SRR5856928 | leaf | control | 17.22 | HC |
| SRR5856929 | leaf | control | 24.79 | HC |
| SRR5856930 | leaf | salt | 11.99 | HC |
| SRR5856931 | leaf | salt | 12.50 | HC |
| SRR5856932 | leaf | salt | 12.34 | HC |
| SRR5856933 | leaf | control | 20.54 | HC |
| SRR5856934 | leaf | control | 17.20 | HC |
| SRR5856935 | leaf | control | 17.56 | HC |
| SRR5856936 | leaf | salt | 11.75 | HC |
| SRR5856937 | leaf | salt | 12.62 | HC |
| SRR5856938 | leaf | salt | 9.06 | HC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 24.44 | HC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 18.25 | HC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 31.76 | HC |
| SRR6053395 | leaf | gibberellic acid (GA) | 32.31 | HC |
| SRR6053396 | leaf | gibberellic acid (GA) | 37.12 | HC |
| SRR6053397 | leaf | gibberellic acid (GA) | 36.36 | HC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 11.99 | HC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 24.44 | HC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 31.99 | HC |
| SRR6168973 | leaf | none (control) | 50.82 | HC |
| SRR6168974 | leaf | none (control) | 38.91 | HC |
| SRR6168975 | leaf | none (control) | 71.37 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 23.92 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 50.65 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 26.80 | HC |
| SRR6168979 | leaf | none (control) | 50.55 | HC |
| SRR6168980 | leaf | none (control) | 36.21 | HC |
| SRR6168981 | leaf | none (control) | 39.80 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 14.19 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 9.46 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 10.54 | HC |
| SRR8582888 | panicle | AM | 13.52 | HC |
| SRR8582889 | panicle | AM | 13.65 | HC |
| SRR8582890 | panicle | AM | 17.82 | HC |
| SRR8582891 | panicle | PM | 28.62 | HC |
| SRR8582892 | panicle | PM | 23.54 | HC |
| SRR8582893 | panicle | PM | 33.58 | HC |
| SRR5110429 | panicle | Dawn | 28.85 | HC |
| SRR5110430 | panicle | Dawn | 29.14 | HC |
| SRR5110431 | panicle | Dawn | 32.14 | HC |
| SRR5110432 | panicle | Dawn | 17.56 | HC |
| SRR4947496 | root | control | 32.50 | HC |
| SRR5110433 | panicle | Dawn + 3.5h | 26.14 | HC |
| SRR5110434 | panicle | Dawn + 3.5h | 17.80 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 12.22 | HC |
| SRR5110436 | panicle | Dawn + 3.5h | 14.52 | HC |
| SRR5110437 | panicle | Dawn + 7h | 39.57 | HC |
| SRR5110438 | panicle | Dawn + 7h | 31.92 | HC |
| SRR5110439 | panicle | Dawn + 7h | 39.67 | HC |
| SRR5110440 | panicle | Dawn + 7h | 18.85 | HC |
| SRR5110441 | panicle | Dawn + 10.5h | 28.24 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 27.68 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 45.17 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 31.55 | HC |
| SRR5110445 | panicle | Dusk | 30.66 | HC |
| SRR5110446 | panicle | Dusk | 26.64 | HC |
| SRR5110447 | panicle | Dusk | 43.58 | HC |
| SRR5110448 | panicle | Dusk | 25.16 | HC |
| SRR5110449 | panicle | Dawn + 14h | 41.76 | HC |
| SRR5110450 | panicle | Dawn + 14h | 19.53 | HC |
| SRR5110451 | panicle | Dawn + 14h | 37.97 | HC |
| SRR5110452 | panicle | Dawn + 14h | 28.40 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 20.44 | HC |
| SRR5110454 | panicle | Dawn + 17.5h | 15.94 | HC |
| SRR5110455 | panicle | Dawn + 17.5h | 25.94 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 26.91 | HC |
| SRR5110457 | panicle | Dawn + 21h | 14.09 | HC |
| SRR5110458 | panicle | Dawn + 21h | 13.54 | HC |
| SRR5110459 | panicle | Dawn + 21h | 21.30 | HC |
| SRR5110460 | panicle | Dawn + 21h | 23.33 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 26.18 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 22.53 | HC |
| SRR1633182 | panicle | WT | 10.23 | HC |
| SRR1633185 | panicle | WT | 15.91 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 37.74 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 40.02 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 44.86 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 43.14 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 36.82 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 43.38 | HC |
| SRR5126147 | root | "mock,1_day" | 41.85 | HC |
| SRR5126148 | root | "mock,1_day" | 39.37 | HC |
| SRR5126149 | root | "mock,1_day" | 49.18 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 48.97 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 52.63 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 41.16 | HC |
| SRR5126153 | root | "mock,7_days" | 51.32 | HC |
| SRR5126155 | root | "mock,7_days" | 62.95 | HC |
| SRR5126157 | root | "mock,7_days" | 51.79 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 61.96 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 47.42 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 59.62 | HC |
| SRR5126165 | root | "mock,14_days" | 55.89 | HC |
| SRR5126167 | root | "mock,14_days" | 48.40 | HC |
| SRR5126169 | root | "mock,14_days" | 61.54 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 46.72 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 57.38 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 60.52 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 26.94 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 36.59 | HC |
| SRR1213694 | root | wt | 43.48 | HC |
| SRR1213695 | root | wt | 40.92 | HC |
| SRR4947478 | root | control | 24.07 | HC |
| SRR4947479 | root | control | 25.51 | HC |
| SRR4947480 | root | control | 41.25 | HC |
| SRR4947481 | root | control | 61.52 | HC |
| SRR4947482 | root | Al | 19.04 | HC |
| SRR4947483 | root | Al | 24.95 | HC |
| SRR4947484 | root | Al | 36.67 | HC |
| SRR4947485 | root | Al | 34.39 | HC |
| SRR4947487 | root | control | 22.68 | HC |
| SRR4947488 | root | control | 25.50 | HC |
| SRR4947489 | root | control | 28.11 | HC |
| SRR4947490 | root | Al | 29.76 | HC |
| SRR4947491 | root | Al | 41.94 | HC |
| SRR4947492 | root | Al | 36.40 | HC |
| SRR4947493 | root | Al | 30.38 | HC |
| SRR4947494 | root | control | 22.60 | HC |
| SRR4947497 | root | control | 27.12 | HC |
| SRR4947498 | root | Al | 38.20 | HC |
| SRR4947499 | root | Al | 27.72 | HC |
| SRR4947500 | root | Al | 27.58 | HC |
| SRR4947501 | root | Al | 38.39 | HC |
| SRR4947502 | root | control | 22.51 | HC |
| SRR4947503 | root | control | 15.96 | HC |
| SRR4947504 | root | control | 29.40 | HC |
| SRR4947505 | root | control | 22.49 | HC |
| SRR4947506 | root | Al | 23.32 | HC |
| SRR4947507 | root | Al | 28.08 | HC |
| SRR4947508 | root | Al | 24.32 | HC |
| SRR4947509 | root | Al | 30.24 | HC |
| SRR6502091 | root | 100 mM NaCl | 17.77 | HC |
| SRR6502092 | root | 100 mM NaCl | 19.18 | HC |
| SRR6502093 | root | 100 mM NaCl | 16.49 | HC |
| SRR6502094 | root | control | 16.56 | HC |
| SRR6502095 | root | control | 17.97 | HC |
| SRR6502096 | root | control | 18.37 | HC |
| SRR6502103 | root | 100 mM NaCl | 15.25 | HC |
| SRR6502104 | root | 100 mM NaCl | 15.42 | HC |
| SRR6502105 | root | 100 mM NaCl | 35.26 | HC |
| SRR6502106 | root | control | 11.85 | HC |
| SRR6502107 | root | control | 12.39 | HC |
| SRR6502108 | root | control | 12.51 | HC |
| SRR1740434 | root_differentiation_zone | wt | 32.24 | HC |
| SRR1740435 | root_differentiation_zone | wt | 17.49 | HC |
| SRR1740436 | root_differentiation_zone | wt | 41.91 | HC |
| SRR1740431 | root_elongation_zone | wt | 16.63 | HC |
| SRR1740432 | root_elongation_zone | wt | 33.05 | HC |
| SRR1740433 | root_elongation_zone | wt | 25.10 | HC |
| SRR1740428 | root_meristematic_zone | wt | 14.77 | HC |
| SRR1740429 | root_meristematic_zone | wt | 27.53 | HC |
| SRR1740430 | root_meristematic_zone | wt | 37.00 | HC |
| SRR6441554 | seedling | wild_type | 34.70 | HC |
| SRR6441555 | seedling | wild_type | 39.41 | HC |
| SRR2154086 | seedling | wt | 36.40 | HC |
| SRR2154082 | seedling | wt | 24.08 | HC |
| SRR2154083 | seedling | wt | 19.29 | HC |
| SRR2154084 | seedling | wt | 18.76 | HC |
| SRR2154085 | seedling | wt | 42.66 | HC |
| SRR2154087 | seedling | wt | 35.42 | HC |
| SRR3098741 | seedling | wt | 19.13 | HC |
| SRR3098742 | seedling | wt | 16.05 | HC |
| SRR3098743 | seedling | wt | 16.00 | HC |
| SRR2857719 | seedling | drought_stress_0h | 41.11 | HC |
| SRR2857720 | seedling | drought_stress_1h | 34.52 | HC |
| SRR2857721 | seedling | drought_stress_6h | 40.94 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 16.24 | HC |
| SRR1944583 | seedling | no_treatment | 49.65 | HC |
| SRR358791 | seedling | wt | 34.99 | HC |
| SRR358792 | seedling | wt | 32.57 | HC |
| SRR358793 | seedling | wt | 57.65 | HC |
| SRR358794 | seedling | wt | 49.00 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 13.19 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 7.76 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 19.10 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 8.53 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 14.77 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 8.19 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.46 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 10.64 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 18.14 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 73.01 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 60.71 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 82.42 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 105.44 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 92.81 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 92.55 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 42.40 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 59.65 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 56.19 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 38.73 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 53.15 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 41.70 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 20.90 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 17.20 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 19.80 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 20.58 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 16.73 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 18.45 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 19.57 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 18.15 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 24.69 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 19.37 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 20.92 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 22.78 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 21.56 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 13.89 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 10.90 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 16.73 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 6.34 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 9.38 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 12.40 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 12.85 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 41.75 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 41.29 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 47.93 | HC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 38.11 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 37.25 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 49.34 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 42.82 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 44.40 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 42.61 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 41.40 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 45.49 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 40.92 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 33.74 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 37.76 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 42.99 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 34.08 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 39.26 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 34.32 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 34.67 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 41.67 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 35.87 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 31.76 | HC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 36.20 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 38.48 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 50.89 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 42.13 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 37.29 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 31.96 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 40.25 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 36.81 | HC |
| SRR1617559 | shoot_apical_meristem | no collect | 31.83 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 35.03 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 33.31 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 48.23 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 38.57 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 34.20 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 37.57 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 14.72 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 20.31 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 20.98 | HC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 15.14 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 23.49 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 15.46 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 13.38 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 16.25 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 15.72 | HC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 17.42 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 21.35 | HC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 22.05 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 18.18 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 13.16 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 14.03 | HC |