| SRR4457249 | 2nd_leaf | DAH4 | 19.22 | HC |
| SRR4457250 | 2nd_leaf | DAH4 | 15.14 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 15.27 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 16.27 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 16.45 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 14.65 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 25.74 | HC |
| SRR4457256 | 2nd_leaf | DAH20 | 26.21 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 21.11 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 31.06 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 28.79 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 32.20 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 18.90 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 18.07 | HC |
| SRR4457263 | 2nd_leaf | DAH36 | 15.65 | HC |
| SRR4457264 | 2nd_leaf | DAH44 | 33.03 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 31.99 | HC |
| SRR4457266 | 2nd_leaf | DAH44 | 40.02 | HC |
| SRR358795 | callus | wt | 13.03 | HC |
| SRR358796 | callus | wt | 13.46 | HC |
| SRR358797 | callus | wt | 15.31 | HC |
| SRR358798 | callus | wt | 15.96 | HC |
| SRR6320498 | carpel | wt | 7.56 | HC |
| SRR5560727 | caryopsis | wild_type | 30.69 | HC |
| SRR5560728 | caryopsis | wild_type | 32.63 | HC |
| SRR5560729 | caryopsis | wild_type | 28.80 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 12.62 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 13.89 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 9.70 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 12.97 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 6.45 | HC |
| SRR2338866 | endosprem | control | 5.51 | HC |
| SRR4457231 | flag_leaf | DAH4 | 10.96 | HC |
| SRR4457232 | flag_leaf | DAH4 | 11.19 | HC |
| SRR4457233 | flag_leaf | DAH4 | 10.48 | HC |
| SRR4457234 | flag_leaf | DAH12 | 12.28 | HC |
| SRR4457235 | flag_leaf | DAH12 | 5.59 | HC |
| SRR4457236 | flag_leaf | DAH12 | 6.76 | HC |
| SRR4457237 | flag_leaf | DAH20 | 8.81 | HC |
| SRR4457238 | flag_leaf | DAH20 | 7.91 | HC |
| SRR4457239 | flag_leaf | DAH20 | 7.18 | HC |
| SRR4457240 | flag_leaf | DAH28 | 13.68 | HC |
| SRR4457241 | flag_leaf | DAH28 | 12.42 | HC |
| SRR4457242 | flag_leaf | DAH28 | 22.07 | HC |
| SRR4457243 | flag_leaf | DAH36 | 16.13 | HC |
| SRR4457244 | flag_leaf | DAH36 | 13.57 | HC |
| SRR4457245 | flag_leaf | DAH36 | 16.60 | HC |
| SRR4457246 | flag_leaf | DAH44 | 35.50 | HC |
| SRR4457247 | flag_leaf | DAH44 | 36.57 | HC |
| SRR4457248 | flag_leaf | DAH44 | 35.45 | HC |
| SRR1213690 | flower | wt(flower buds) | 10.43 | HC |
| SRR1213691 | flower | wt | 26.11 | HC |
| SRR8060835 | leaf | wild_type | 6.79 | HC |
| SRR8060836 | leaf | wild_type | 8.30 | HC |
| SRR8060837 | leaf | wild_type | 7.49 | HC |
| SRR8240824 | leaf | wild_type | 3.40 | HC |
| SRR8240826 | leaf | wild_type | 2.68 | HC |
| SRR8240818 | leaf | wild_type | 3.69 | HC |
| SRR8240819 | leaf | wild_type | 5.20 | HC |
| SRR8240820 | leaf | wild_type | 8.74 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 15.32 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 14.67 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 8.97 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 11.75 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 14.57 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 13.55 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 14.12 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 12.70 | HC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 9.03 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 12.42 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 16.46 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 12.02 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 11.75 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 18.30 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 12.48 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 10.90 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 13.03 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 13.27 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 11.14 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 15.94 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 12.31 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 11.64 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 14.89 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 12.53 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 12.76 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 22.75 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 13.35 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 15.63 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 13.44 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 10.45 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 14.18 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 16.84 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 12.14 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 13.49 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 15.60 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 12.49 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 13.25 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 17.40 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 19.99 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 14.51 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 15.92 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 12.78 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 11.88 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 9.58 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 15.92 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 12.78 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 11.88 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 9.58 | HC |
| SRR1761528 | leaf | drought | 15.92 | HC |
| SRR1761529 | leaf | drought | 12.78 | HC |
| SRR1761530 | leaf | control | 11.88 | HC |
| SRR1761531 | leaf | control | 9.58 | HC |
| SRR504365 | leaf | wt | 31.75 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 5.77 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 5.32 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 5.31 | HC |
| SRR6417967 | leaf | H2O_control | 9.39 | HC |
| SRR6417968 | leaf | H2O_control | 6.33 | HC |
| SRR6417969 | leaf | H2O_control | 7.00 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 3.68 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 4.05 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 4.25 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 8.01 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 5.37 | HC |
| SRR8611900 | leaf | Non-inoculated | 7.59 | HC |
| SRR8611901 | leaf | Non-inoculated | 8.72 | HC |
| SRR8611902 | leaf | Non-inoculated | 8.13 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 8.03 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 9.63 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 8.22 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 13.41 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 13.21 | HC |
| SRR1213692 | leaf | wt | 28.07 | HC |
| SRR1213693 | leaf | wt | 11.97 | HC |
| SRR5856937 | leaf | salt | 1.82 | HC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 15.28 | HC |
| SRR6053396 | leaf | gibberellic acid (GA) | 33.47 | HC |
| SRR6053397 | leaf | gibberellic acid (GA) | 22.02 | HC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 10.60 | HC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 11.32 | HC |
| SRR8582888 | panicle | AM | 8.47 | HC |
| SRR8582889 | panicle | AM | 4.07 | HC |
| SRR8582890 | panicle | AM | 6.57 | HC |
| SRR8582891 | panicle | PM | 27.50 | HC |
| SRR8582892 | panicle | PM | 25.36 | HC |
| SRR8582893 | panicle | PM | 16.74 | HC |
| SRR5110429 | panicle | Dawn | 5.40 | HC |
| SRR5110430 | panicle | Dawn | 7.54 | HC |
| SRR5110431 | panicle | Dawn | 7.24 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 4.62 | HC |
| SRR5110439 | panicle | Dawn + 7h | 6.56 | HC |
| SRR5110448 | panicle | Dusk | 6.00 | HC |
| SRR5110449 | panicle | Dawn + 14h | 6.54 | HC |
| SRR5110451 | panicle | Dawn + 14h | 4.36 | HC |
| SRR5110458 | panicle | Dawn + 21h | 3.57 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 6.55 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 3.99 | HC |
| SRR1633182 | panicle | WT | 13.29 | HC |
| SRR1633185 | panicle | WT | 17.33 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 29.17 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 28.57 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 28.88 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 33.08 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 46.07 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 32.92 | HC |
| SRR5126147 | root | "mock,1_day" | 4.89 | HC |
| SRR5126148 | root | "mock,1_day" | 4.64 | HC |
| SRR5126149 | root | "mock,1_day" | 8.70 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 7.63 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 8.22 | HC |
| SRR5126153 | root | "mock,7_days" | 9.34 | HC |
| SRR5126155 | root | "mock,7_days" | 11.15 | HC |
| SRR5126157 | root | "mock,7_days" | 10.18 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 19.90 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 17.35 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 16.79 | HC |
| SRR5126165 | root | "mock,14_days" | 8.12 | HC |
| SRR5126167 | root | "mock,14_days" | 16.77 | HC |
| SRR5126169 | root | "mock,14_days" | 12.05 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 25.82 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 24.65 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 18.23 | HC |
| SRR1213694 | root | wt | 23.75 | HC |
| SRR1213695 | root | wt | 15.47 | HC |
| SRR4947481 | root | control | 8.38 | HC |
| SRR4947485 | root | Al | 7.62 | HC |
| SRR4947488 | root | control | 6.15 | HC |
| SRR4947504 | root | control | 5.79 | HC |
| SRR4947505 | root | control | 6.35 | HC |
| SRR4947508 | root | Al | 5.30 | HC |
| SRR4947509 | root | Al | 5.34 | HC |
| SRR1740434 | root_differentiation_zone | wt | 5.15 | HC |
| SRR6441554 | seedling | wild_type | 14.44 | HC |
| SRR6441555 | seedling | wild_type | 17.83 | HC |
| SRR2154086 | seedling | wt | 10.70 | HC |
| SRR2154082 | seedling | wt | 4.95 | HC |
| SRR2154083 | seedling | wt | 4.35 | HC |
| SRR2154085 | seedling | wt | 10.81 | HC |
| SRR2154087 | seedling | wt | 11.86 | HC |
| SRR3098741 | seedling | wt | 6.87 | HC |
| SRR3098742 | seedling | wt | 6.76 | HC |
| SRR3098743 | seedling | wt | 5.74 | HC |
| SRR2857719 | seedling | drought_stress_0h | 9.13 | HC |
| SRR2857720 | seedling | drought_stress_1h | 8.67 | HC |
| SRR2857721 | seedling | drought_stress_6h | 3.63 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 10.33 | HC |
| SRR1944583 | seedling | no_treatment | 8.20 | HC |
| SRR358791 | seedling | wt | 13.24 | HC |
| SRR358792 | seedling | wt | 15.69 | HC |
| SRR358793 | seedling | wt | 13.93 | HC |
| SRR358794 | seedling | wt | 13.89 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 6.32 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 5.95 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 3.58 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 3.41 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 3.75 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 3.26 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 4.51 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 6.72 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 4.55 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 4.15 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 7.15 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 5.50 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 10.23 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 9.31 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 22.52 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 22.74 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 15.40 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 13.56 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 13.34 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 12.31 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 16.79 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 15.47 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 8.01 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 7.81 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 11.18 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 11.28 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 11.47 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 11.56 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 7.63 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 9.36 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 13.11 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 14.14 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 23.65 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 21.53 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 28.09 | HC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 24.67 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 35.36 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 33.17 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 23.12 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 23.34 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 22.64 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 18.10 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 19.85 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 18.57 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 22.18 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 24.73 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 27.09 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 29.35 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 25.80 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 22.93 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 23.04 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 26.30 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 20.70 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 31.04 | HC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 42.14 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 14.87 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 19.24 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 8.36 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 9.08 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 7.69 | HC |
| SRR1617559 | shoot_apical_meristem | no collect | 10.35 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 9.91 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 6.50 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 6.36 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 10.84 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 6.46 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 8.18 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 5.63 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 4.90 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 6.25 | HC |