| SRR4457250 | 2nd_leaf | DAH4 | 5.13 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 3.99 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 7.99 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 8.49 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 6.87 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 7.07 | HC |
| SRR4457256 | 2nd_leaf | DAH20 | 7.33 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 6.20 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 5.15 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 4.72 | HC |
| SRR3745127 | anther | wt | 5.79 | HC |
| SRR5560727 | caryopsis | wild_type | 7.28 | HC |
| SRR5560728 | caryopsis | wild_type | 7.63 | HC |
| SRR5560729 | caryopsis | wild_type | 7.68 | HC |
| SRR7265403 | coleoptile | 2dN | 6.48 | HC |
| SRR7265404 | coleoptile | 2dN | 7.87 | HC |
| SRR7265405 | coleoptile | 2dN | 5.53 | HC |
| SRR7265406 | coleoptile | 3dA | 4.20 | HC |
| SRR7265412 | coleoptile | 4dA | 4.71 | HC |
| SRR7265413 | coleoptile | 4dA | 8.29 | HC |
| SRR7265414 | coleoptile | 4dA | 5.61 | HC |
| SRR7265415 | coleoptile | 4dN | 5.65 | HC |
| SRR7265417 | coleoptile | 4dN | 5.11 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 4.54 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 7.62 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 8.00 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 5.12 | HC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 8.32 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 6.94 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 7.32 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 6.96 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 7.36 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 5.19 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 8.37 | HC |
| SRR7265378 | embryo | 1hA | 5.43 | HC |
| SRR7265379 | embryo | 1hN | 3.87 | HC |
| SRR7265381 | embryo | 1hN | 4.15 | HC |
| SRR7265388 | embryo | 12hA | 8.96 | HC |
| SRR7265389 | embryo | 12hA | 9.78 | HC |
| SRR7265390 | embryo | 12hA | 8.73 | HC |
| SRR7265391 | embryo | 12hN | 9.94 | HC |
| SRR7265392 | embryo | 12hN | 9.69 | HC |
| SRR7265393 | embryo | 12hN | 12.84 | HC |
| SRR7265394 | embryo | 24hA | 11.25 | HC |
| SRR7265395 | embryo | 24hA | 11.01 | HC |
| SRR7265396 | embryo | 24hA | 7.73 | HC |
| SRR7265397 | embryo | 24hN | 13.80 | HC |
| SRR7265398 | embryo | 24hN | 9.59 | HC |
| SRR7265399 | embryo | 24hN | 15.50 | HC |
| SRR4457231 | flag_leaf | DAH4 | 5.37 | HC |
| SRR4457232 | flag_leaf | DAH4 | 6.57 | HC |
| SRR4457233 | flag_leaf | DAH4 | 6.99 | HC |
| SRR4457234 | flag_leaf | DAH12 | 4.41 | HC |
| SRR4457235 | flag_leaf | DAH12 | 5.33 | HC |
| SRR4457236 | flag_leaf | DAH12 | 5.98 | HC |
| SRR4457237 | flag_leaf | DAH20 | 6.62 | HC |
| SRR4457238 | flag_leaf | DAH20 | 4.66 | HC |
| SRR4457239 | flag_leaf | DAH20 | 6.44 | HC |
| SRR1213690 | flower | wt(flower buds) | 4.66 | HC |
| SRR1213691 | flower | wt | 5.69 | HC |
| SRR8060837 | leaf | wild_type | 3.19 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 4.61 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 4.67 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 6.26 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 5.53 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 6.13 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 5.66 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 11.91 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 10.43 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 11.91 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 10.43 | HC |
| SRR1761530 | leaf | control | 11.91 | HC |
| SRR1761531 | leaf | control | 10.43 | HC |
| SRR504365 | leaf | wt | 4.65 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 4.86 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 4.02 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 5.95 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 5.05 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 5.71 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 5.42 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 6.59 | HC |
| SRR6502088 | leaf | control | 5.27 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 14.97 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 12.44 | HC |
| SRR5856927 | leaf | control | 4.35 | HC |
| SRR5856928 | leaf | control | 4.07 | HC |
| SRR5856929 | leaf | control | 5.01 | HC |
| SRR5856930 | leaf | salt | 2.45 | HC |
| SRR5856932 | leaf | salt | 2.25 | HC |
| SRR5856933 | leaf | control | 3.27 | HC |
| SRR5856935 | leaf | control | 4.22 | HC |
| SRR5856936 | leaf | salt | 3.13 | HC |
| SRR5856937 | leaf | salt | 2.57 | HC |
| SRR5856938 | leaf | salt | 2.11 | HC |
| SRR6168973 | leaf | none (control) | 7.78 | HC |
| SRR6168974 | leaf | none (control) | 10.49 | HC |
| SRR6168975 | leaf | none (control) | 8.71 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 9.12 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 9.44 | HC |
| SRR8582888 | panicle | AM | 6.03 | HC |
| SRR8582889 | panicle | AM | 2.23 | HC |
| SRR8582890 | panicle | AM | 3.02 | HC |
| SRR8582891 | panicle | PM | 14.49 | HC |
| SRR8582892 | panicle | PM | 13.34 | HC |
| SRR8582893 | panicle | PM | 9.74 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 5.16 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 9.49 | HC |
| SRR5110445 | panicle | Dusk | 4.74 | HC |
| SRR5110446 | panicle | Dusk | 8.03 | HC |
| SRR5110447 | panicle | Dusk | 7.96 | HC |
| SRR5110448 | panicle | Dusk | 5.96 | HC |
| SRR5110449 | panicle | Dawn + 14h | 10.27 | HC |
| SRR5110451 | panicle | Dawn + 14h | 5.98 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 5.46 | HC |
| SRR5110454 | panicle | Dawn + 17.5h | 3.91 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 3.87 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 7.85 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 6.90 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 5.28 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 5.13 | HC |
| SRR5126157 | root | "mock,7_days" | 6.49 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 6.97 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 7.22 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 8.33 | HC |
| SRR5126169 | root | "mock,14_days" | 5.37 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 6.47 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 5.17 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 10.48 | HC |
| SRR1213694 | root | wt | 5.08 | HC |
| SRR1213695 | root | wt | 3.56 | HC |
| SRR4947479 | root | control | 8.15 | HC |
| SRR4947482 | root | Al | 5.35 | HC |
| SRR4947487 | root | control | 8.34 | HC |
| SRR4947489 | root | control | 7.21 | HC |
| SRR4947499 | root | Al | 5.93 | HC |
| SRR4947502 | root | control | 14.39 | HC |
| SRR4947503 | root | control | 5.25 | HC |
| SRR4947508 | root | Al | 5.23 | HC |
| SRR6502091 | root | 100 mM NaCl | 7.12 | HC |
| SRR6502104 | root | 100 mM NaCl | 6.50 | HC |
| SRR1740429 | root_meristematic_zone | wt | 3.78 | HC |
| SRR1740430 | root_meristematic_zone | wt | 6.52 | HC |
| SRR2154086 | seedling | wt | 7.34 | HC |
| SRR2154082 | seedling | wt | 5.47 | HC |
| SRR2154083 | seedling | wt | 7.09 | HC |
| SRR2154084 | seedling | wt | 4.79 | HC |
| SRR2154085 | seedling | wt | 5.27 | HC |
| SRR2154087 | seedling | wt | 6.45 | HC |
| SRR3098741 | seedling | wt | 4.15 | HC |
| SRR3098742 | seedling | wt | 4.71 | HC |
| SRR3098743 | seedling | wt | 8.14 | HC |
| SRR2857719 | seedling | drought_stress_0h | 8.16 | HC |
| SRR2857720 | seedling | drought_stress_1h | 5.57 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 8.95 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 11.59 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 3.40 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 13.52 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 11.81 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 12.57 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 9.62 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 11.85 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 9.64 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 12.93 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 9.89 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 12.59 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 8.38 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 11.00 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 13.24 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 10.59 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 10.87 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 13.05 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 8.48 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 11.00 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 13.17 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 4.45 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 3.66 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 6.93 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 4.48 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 7.01 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 4.87 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 5.95 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 7.95 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 6.15 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 7.10 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 5.45 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 4.61 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 4.35 | HC |