| SRR4457249 | 2nd_leaf | DAH4 | 6.81 | HC |
| SRR4457250 | 2nd_leaf | DAH4 | 5.71 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 5.53 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 4.46 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 4.32 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 6.26 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 5.83 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 5.50 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 4.80 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 6.69 | HC |
| SRR4457263 | 2nd_leaf | DAH36 | 5.10 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 4.88 | HC |
| SRR3745126 | anther | wt | 6.55 | HC |
| SRR3745127 | anther | wt | 5.52 | HC |
| SRR6320473 | carpel | wt | 10.66 | HC |
| SRR6320498 | carpel | wt | 11.14 | HC |
| SRR5560727 | caryopsis | wild_type | 11.89 | HC |
| SRR5560728 | caryopsis | wild_type | 11.71 | HC |
| SRR5560729 | caryopsis | wild_type | 10.93 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 5.70 | HC |
| SRR4947495 | root | control | 5.08 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 4.48 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 4.55 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 5.82 | HC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 6.13 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 5.27 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 6.91 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 5.47 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 6.23 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 5.35 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 6.09 | HC |
| SRR7265373 | embryo | dry seed 0 h | 6.38 | HC |
| SRR7265374 | embryo | dry seed 0 h | 7.24 | HC |
| SRR7265375 | embryo | dry seed 0 h | 2.36 | HC |
| SRR7265376 | embryo | 1hA | 6.91 | HC |
| SRR7265377 | embryo | 1hA | 6.95 | HC |
| SRR7265378 | embryo | 1hA | 6.62 | HC |
| SRR7265379 | embryo | 1hN | 6.89 | HC |
| SRR7265380 | embryo | 1hN | 7.05 | HC |
| SRR7265381 | embryo | 1hN | 7.15 | HC |
| SRR7265382 | embryo | 3hA | 5.38 | HC |
| SRR7265383 | embryo | 3hA | 5.07 | HC |
| SRR7265384 | embryo | 3hA | 4.86 | HC |
| SRR7265385 | embryo | 3hN | 6.54 | HC |
| SRR7265386 | embryo | 3hN | 5.74 | HC |
| SRR7265387 | embryo | 3hN | 6.16 | HC |
| SRR7265391 | embryo | 12hN | 5.89 | HC |
| SRR4457231 | flag_leaf | DAH4 | 3.49 | HC |
| SRR4457232 | flag_leaf | DAH4 | 4.64 | HC |
| SRR4457233 | flag_leaf | DAH4 | 3.68 | HC |
| SRR4457234 | flag_leaf | DAH12 | 3.40 | HC |
| SRR4457235 | flag_leaf | DAH12 | 5.02 | HC |
| SRR4457236 | flag_leaf | DAH12 | 5.15 | HC |
| SRR4457237 | flag_leaf | DAH20 | 4.81 | HC |
| SRR4457238 | flag_leaf | DAH20 | 5.22 | HC |
| SRR4457239 | flag_leaf | DAH20 | 5.09 | HC |
| SRR4457240 | flag_leaf | DAH28 | 5.52 | HC |
| SRR4457241 | flag_leaf | DAH28 | 4.20 | HC |
| SRR4457243 | flag_leaf | DAH36 | 4.43 | HC |
| SRR4457244 | flag_leaf | DAH36 | 5.14 | HC |
| SRR4457245 | flag_leaf | DAH36 | 4.92 | HC |
| SRR1213690 | flower | wt(flower buds) | 4.08 | HC |
| SRR1213691 | flower | wt | 4.28 | HC |
| SRR8060835 | leaf | wild_type | 6.96 | HC |
| SRR8060836 | leaf | wild_type | 6.78 | HC |
| SRR8060837 | leaf | wild_type | 4.94 | HC |
| SRR8240824 | leaf | wild_type | 3.01 | HC |
| SRR8240825 | leaf | wild_type | 2.84 | HC |
| SRR8240820 | leaf | wild_type | 2.78 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 4.25 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 5.71 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.80 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 5.74 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 5.72 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 5.13 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 5.96 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 5.15 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 5.45 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 5.53 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 6.09 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 6.06 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.84 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 6.41 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 5.77 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.71 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 6.34 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 5.74 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 5.74 | HC |
| SRR1761528 | leaf | drought | 5.74 | HC |
| SRR504365 | leaf | wt | 6.98 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 3.64 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 4.79 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 5.79 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 3.51 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 5.04 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 5.12 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 5.07 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 3.74 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 6.33 | HC |
| SRR8611900 | leaf | Non-inoculated | 5.75 | HC |
| SRR8611901 | leaf | Non-inoculated | 6.07 | HC |
| SRR8611902 | leaf | Non-inoculated | 5.43 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 12.28 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 10.65 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 10.93 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 5.13 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 5.23 | HC |
| SRR1213693 | leaf | wt | 3.98 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 4.77 | HC |
| SRR5856927 | leaf | control | 3.49 | HC |
| SRR5856928 | leaf | control | 4.18 | HC |
| SRR5856929 | leaf | control | 3.52 | HC |
| SRR5856930 | leaf | salt | 4.22 | HC |
| SRR5856931 | leaf | salt | 4.58 | HC |
| SRR5856932 | leaf | salt | 4.03 | HC |
| SRR5856933 | leaf | control | 3.91 | HC |
| SRR5856934 | leaf | control | 3.25 | HC |
| SRR5856935 | leaf | control | 4.26 | HC |
| SRR5856936 | leaf | salt | 4.91 | HC |
| SRR5856937 | leaf | salt | 5.05 | HC |
| SRR5856938 | leaf | salt | 5.00 | HC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 8.54 | HC |
| SRR6053396 | leaf | gibberellic acid (GA) | 10.08 | HC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 9.02 | HC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 6.65 | HC |
| SRR6168973 | leaf | none (control) | 7.86 | HC |
| SRR6168974 | leaf | none (control) | 9.78 | HC |
| SRR6168975 | leaf | none (control) | 14.48 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 30.27 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 3.08 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 26.71 | HC |
| SRR6168979 | leaf | none (control) | 8.11 | HC |
| SRR6168980 | leaf | none (control) | 5.08 | HC |
| SRR6168981 | leaf | none (control) | 8.45 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 9.59 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 13.16 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 13.56 | HC |
| SRR8582888 | panicle | AM | 3.95 | HC |
| SRR8582889 | panicle | AM | 2.81 | HC |
| SRR8582890 | panicle | AM | 3.04 | HC |
| SRR8582891 | panicle | PM | 6.69 | HC |
| SRR8582893 | panicle | PM | 7.76 | HC |
| SRR5110429 | panicle | Dawn | 6.80 | HC |
| SRR5110430 | panicle | Dawn | 7.71 | HC |
| SRR5110431 | panicle | Dawn | 5.58 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 4.55 | HC |
| SRR5110437 | panicle | Dawn + 7h | 6.53 | HC |
| SRR5110438 | panicle | Dawn + 7h | 6.65 | HC |
| SRR5110440 | panicle | Dawn + 7h | 6.09 | HC |
| SRR5110441 | panicle | Dawn + 10.5h | 5.67 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 4.94 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 5.65 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 5.66 | HC |
| SRR5110445 | panicle | Dusk | 6.76 | HC |
| SRR5110446 | panicle | Dusk | 6.70 | HC |
| SRR5110447 | panicle | Dusk | 6.69 | HC |
| SRR5110448 | panicle | Dusk | 6.73 | HC |
| SRR5110449 | panicle | Dawn + 14h | 7.92 | HC |
| SRR5110450 | panicle | Dawn + 14h | 5.75 | HC |
| SRR5110451 | panicle | Dawn + 14h | 6.55 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 4.95 | HC |
| SRR5110454 | panicle | Dawn + 17.5h | 4.91 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 6.24 | HC |
| SRR5110457 | panicle | Dawn + 21h | 4.15 | HC |
| SRR5110458 | panicle | Dawn + 21h | 3.74 | HC |
| SRR5110459 | panicle | Dawn + 21h | 4.47 | HC |
| SRR5110460 | panicle | Dawn + 21h | 6.81 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 2.31 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 9.84 | HC |
| SRR1633182 | panicle | WT | 7.01 | HC |
| SRR1633185 | panicle | WT | 7.87 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 5.33 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 5.71 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 8.08 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 6.67 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 13.85 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 13.64 | HC |
| SRR5126148 | root | "mock,1_day" | 3.83 | HC |
| SRR5126149 | root | "mock,1_day" | 5.04 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 5.54 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 4.39 | HC |
| SRR5126155 | root | "mock,7_days" | 5.04 | HC |
| SRR5126157 | root | "mock,7_days" | 5.96 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 5.45 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 5.59 | HC |
| SRR5126167 | root | "mock,14_days" | 4.06 | HC |
| SRR5126169 | root | "mock,14_days" | 5.51 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 6.04 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 5.54 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 8.14 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 4.19 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 5.27 | HC |
| SRR1213695 | root | wt | 4.70 | HC |
| SRR4947482 | root | Al | 4.34 | HC |
| SRR4947487 | root | control | 5.60 | HC |
| SRR4947490 | root | Al | 4.94 | HC |
| SRR4947498 | root | Al | 6.22 | HC |
| SRR4947506 | root | Al | 5.02 | HC |
| SRR6502091 | root | 100 mM NaCl | 5.43 | HC |
| SRR6502092 | root | 100 mM NaCl | 5.77 | HC |
| SRR6502094 | root | control | 5.28 | HC |
| SRR6502095 | root | control | 5.16 | HC |
| SRR6502096 | root | control | 5.20 | HC |
| SRR6502105 | root | 100 mM NaCl | 6.52 | HC |
| SRR6502106 | root | control | 5.50 | HC |
| SRR6502107 | root | control | 4.11 | HC |
| SRR6441554 | seedling | wild_type | 3.20 | HC |
| SRR2154086 | seedling | wt | 4.93 | HC |
| SRR2154082 | seedling | wt | 3.96 | HC |
| SRR2154083 | seedling | wt | 4.30 | HC |
| SRR2154087 | seedling | wt | 5.12 | HC |
| SRR3098741 | seedling | wt | 3.52 | HC |
| SRR3098742 | seedling | wt | 3.88 | HC |
| SRR3098743 | seedling | wt | 4.60 | HC |
| SRR2857719 | seedling | drought_stress_0h | 5.04 | HC |
| SRR2857721 | seedling | drought_stress_6h | 4.52 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 3.59 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 5.42 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 5.89 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 3.74 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 3.38 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 3.95 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 4.10 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 3.86 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 4.29 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 3.71 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 5.77 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 3.18 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 3.47 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 3.70 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 4.10 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 5.64 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 6.32 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 11.16 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 11.93 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 11.53 | HC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 12.69 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 14.34 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 10.39 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 14.15 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 10.09 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 10.50 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 9.04 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 11.63 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 11.17 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 10.02 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 12.29 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 14.24 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 10.16 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 10.04 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 10.33 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 11.97 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 10.79 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 10.55 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 13.95 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 8.78 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 5.83 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 6.94 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 6.85 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 5.13 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 7.26 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 6.10 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 4.79 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 4.35 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 3.70 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 4.75 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 4.67 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 4.62 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 4.89 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 4.41 | HC |