| SRR4457251 | 2nd_leaf | DAH4 | 6.04 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 3.88 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 4.67 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 5.04 | HC |
| SRR4457256 | 2nd_leaf | DAH20 | 4.80 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 5.96 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 6.60 | HC |
| SRR358797 | callus | wt | 9.45 | HC |
| SRR5560727 | caryopsis | wild_type | 5.97 | HC |
| SRR5560728 | caryopsis | wild_type | 6.04 | HC |
| SRR5560729 | caryopsis | wild_type | 8.43 | HC |
| SRR7265373 | embryo | dry seed 0 h | 4.58 | HC |
| SRR7265375 | embryo | dry seed 0 h | 1.90 | HC |
| SRR7265376 | embryo | 1hA | 4.51 | HC |
| SRR7265377 | embryo | 1hA | 6.00 | HC |
| SRR7265378 | embryo | 1hA | 7.05 | HC |
| SRR7265379 | embryo | 1hN | 4.16 | HC |
| SRR7265380 | embryo | 1hN | 4.81 | HC |
| SRR7265381 | embryo | 1hN | 5.53 | HC |
| SRR7265384 | embryo | 3hA | 4.21 | HC |
| SRR7265385 | embryo | 3hN | 5.23 | HC |
| SRR7265386 | embryo | 3hN | 5.18 | HC |
| SRR7265387 | embryo | 3hN | 5.57 | HC |
| SRR7265388 | embryo | 12hA | 6.34 | HC |
| SRR7265389 | embryo | 12hA | 7.25 | HC |
| SRR7265390 | embryo | 12hA | 6.91 | HC |
| SRR7265391 | embryo | 12hN | 8.46 | HC |
| SRR7265392 | embryo | 12hN | 7.61 | HC |
| SRR7265393 | embryo | 12hN | 8.77 | HC |
| SRR7265396 | embryo | 24hA | 6.11 | HC |
| SRR7265398 | embryo | 24hN | 4.97 | HC |
| SRR7265399 | embryo | 24hN | 5.42 | HC |
| SRR4457232 | flag_leaf | DAH4 | 4.73 | HC |
| SRR4457233 | flag_leaf | DAH4 | 5.00 | HC |
| SRR4457235 | flag_leaf | DAH12 | 5.48 | HC |
| SRR4457236 | flag_leaf | DAH12 | 5.05 | HC |
| SRR4457237 | flag_leaf | DAH20 | 6.13 | HC |
| SRR4457238 | flag_leaf | DAH20 | 6.43 | HC |
| SRR4457239 | flag_leaf | DAH20 | 4.56 | HC |
| SRR4457241 | flag_leaf | DAH28 | 4.43 | HC |
| SRR4457243 | flag_leaf | DAH36 | 4.42 | HC |
| SRR4457244 | flag_leaf | DAH36 | 4.35 | HC |
| SRR4457245 | flag_leaf | DAH36 | 7.00 | HC |
| SRR1213690 | flower | wt(flower buds) | 8.30 | HC |
| SRR1213691 | flower | wt | 6.03 | HC |
| SRR8240824 | leaf | wild_type | 9.36 | HC |
| SRR8240825 | leaf | wild_type | 7.70 | HC |
| SRR8240826 | leaf | wild_type | 11.53 | HC |
| SRR8240818 | leaf | wild_type | 3.19 | HC |
| SRR8240819 | leaf | wild_type | 5.36 | HC |
| SRR8240820 | leaf | wild_type | 6.96 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 4.51 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 9.87 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 7.03 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 8.41 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 8.78 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 8.76 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 8.46 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 7.03 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 10.16 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 8.20 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 9.85 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 7.48 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 9.16 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 8.35 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 9.01 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 8.79 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 9.39 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 10.22 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 10.10 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 8.48 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 7.46 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 9.16 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 8.34 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 7.78 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 9.85 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 9.70 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 8.47 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 6.42 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 8.66 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 9.39 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 7.74 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 14.09 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 5.83 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 5.83 | HC |
| SRR1761529 | leaf | drought | 5.83 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 4.87 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 4.54 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 6.35 | HC |
| SRR6417967 | leaf | H2O_control | 4.57 | HC |
| SRR6417968 | leaf | H2O_control | 5.40 | HC |
| SRR6417969 | leaf | H2O_control | 5.75 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 6.30 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 6.64 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 3.95 | HC |
| SRR8611900 | leaf | Non-inoculated | 8.07 | HC |
| SRR8611901 | leaf | Non-inoculated | 8.11 | HC |
| SRR8611902 | leaf | Non-inoculated | 10.53 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 7.55 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 9.81 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 9.70 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 9.17 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 10.53 | HC |
| SRR1213692 | leaf | wt | 13.53 | HC |
| SRR1213693 | leaf | wt | 13.44 | HC |
| SRR8582888 | panicle | AM | 6.03 | HC |
| SRR8582889 | panicle | AM | 6.41 | HC |
| SRR8582890 | panicle | AM | 6.10 | HC |
| SRR8582891 | panicle | PM | 8.86 | HC |
| SRR8582893 | panicle | PM | 11.03 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 2.39 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 9.60 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 8.85 | HC |
| SRR5126147 | root | "mock,1_day" | 7.92 | HC |
| SRR5126148 | root | "mock,1_day" | 8.96 | HC |
| SRR5126149 | root | "mock,1_day" | 7.89 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 8.26 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 9.98 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 7.80 | HC |
| SRR5126153 | root | "mock,7_days" | 5.73 | HC |
| SRR5126155 | root | "mock,7_days" | 7.11 | HC |
| SRR5126157 | root | "mock,7_days" | 9.08 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 8.67 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 9.21 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 9.17 | HC |
| SRR5126165 | root | "mock,14_days" | 7.50 | HC |
| SRR5126167 | root | "mock,14_days" | 6.47 | HC |
| SRR5126169 | root | "mock,14_days" | 8.65 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 9.50 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 8.40 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 9.79 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 5.17 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 5.95 | HC |
| SRR1213694 | root | wt | 3.83 | HC |
| SRR1213695 | root | wt | 14.64 | HC |
| SRR1740432 | root_elongation_zone | wt | 4.97 | HC |
| SRR1740433 | root_elongation_zone | wt | 5.61 | HC |
| SRR1740428 | root_meristematic_zone | wt | 10.09 | HC |
| SRR1740429 | root_meristematic_zone | wt | 11.32 | HC |
| SRR1740430 | root_meristematic_zone | wt | 13.13 | HC |
| SRR6441554 | seedling | wild_type | 4.09 | HC |
| SRR6441555 | seedling | wild_type | 4.69 | HC |
| SRR2154086 | seedling | wt | 10.11 | HC |
| SRR2154085 | seedling | wt | 7.81 | HC |
| SRR2154087 | seedling | wt | 8.91 | HC |
| SRR3098741 | seedling | wt | 5.60 | HC |
| SRR3098742 | seedling | wt | 5.07 | HC |
| SRR3098743 | seedling | wt | 4.93 | HC |
| SRR2857720 | seedling | drought_stress_1h | 6.11 | HC |
| SRR2857721 | seedling | drought_stress_6h | 4.10 | HC |
| SRR1944583 | seedling | no_treatment | 4.82 | HC |
| SRR358791 | seedling | wt | 10.41 | HC |
| SRR358792 | seedling | wt | 13.42 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 7.35 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 11.19 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 9.65 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 13.22 | HC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 19.18 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 19.11 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 13.85 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 6.79 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 11.35 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 12.01 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 7.79 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 10.28 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 9.16 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 5.15 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 6.81 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 8.39 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 6.42 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 12.50 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 13.28 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 6.87 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 8.83 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 13.77 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 8.88 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 7.96 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 8.59 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 6.95 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 6.84 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 6.33 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 9.46 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 7.85 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 4.47 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 5.50 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 6.29 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 7.36 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 8.71 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 6.07 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 6.68 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 6.30 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 6.06 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 4.22 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 8.03 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 8.25 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 10.18 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 8.65 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 8.31 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 9.71 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 7.68 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 10.60 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 8.28 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 7.69 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 5.93 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 4.72 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 7.61 | HC |