| SRR5560727 | caryopsis | wild_type | 15.98 | HC |
| SRR5560728 | caryopsis | wild_type | 14.47 | HC |
| SRR5560729 | caryopsis | wild_type | 7.80 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 5.88 | HC |
| SRR7265409 | coleoptile | 3dN | 6.24 | HC |
| SRR7265410 | coleoptile | 3dN | 7.97 | HC |
| SRR7265411 | coleoptile | 3dN | 6.46 | HC |
| SRR7265412 | coleoptile | 4dA | 12.25 | HC |
| SRR7265413 | coleoptile | 4dA | 12.08 | HC |
| SRR7265414 | coleoptile | 4dA | 10.40 | HC |
| SRR7265415 | coleoptile | 4dN | 5.14 | HC |
| SRR7265416 | coleoptile | 4dN | 5.62 | HC |
| SRR7265417 | coleoptile | 4dN | 5.16 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 5.66 | HC |
| SRR7265376 | embryo | 1hA | 3.72 | HC |
| SRR7265377 | embryo | 1hA | 4.80 | HC |
| SRR7265378 | embryo | 1hA | 4.52 | HC |
| SRR7265382 | embryo | 3hA | 5.72 | HC |
| SRR976168 | flag_leaf | wild_type | 12.33 | HC |
| SRR1213690 | flower | wt(flower buds) | 15.16 | HC |
| SRR1213691 | flower | wt | 14.30 | HC |
| SRR8060835 | leaf | wild_type | 10.44 | HC |
| SRR8060836 | leaf | wild_type | 5.83 | HC |
| SRR8060837 | leaf | wild_type | 11.71 | HC |
| SRR8240824 | leaf | wild_type | 6.92 | HC |
| SRR8240825 | leaf | wild_type | 3.76 | HC |
| SRR8240826 | leaf | wild_type | 2.45 | HC |
| SRR8240818 | leaf | wild_type | 25.63 | HC |
| SRR8240819 | leaf | wild_type | 41.62 | HC |
| SRR8240820 | leaf | wild_type | 55.86 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 13.01 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 16.43 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 14.99 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 11.95 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.84 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 7.86 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 13.13 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 7.86 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 13.13 | HC |
| SRR1761528 | leaf | drought | 7.86 | HC |
| SRR1761529 | leaf | drought | 13.13 | HC |
| SRR504365 | leaf | wt | 28.74 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 4.90 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 8.31 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 3.68 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 6.47 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 3.94 | HC |
| SRR8611900 | leaf | Non-inoculated | 31.15 | HC |
| SRR8611901 | leaf | Non-inoculated | 30.06 | HC |
| SRR8611902 | leaf | Non-inoculated | 33.46 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 17.05 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 19.60 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 21.73 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 18.09 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 18.71 | HC |
| SRR1213692 | leaf | wt | 16.12 | HC |
| SRR1213693 | leaf | wt | 10.40 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 18.42 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 22.78 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 22.83 | HC |
| SRR6502088 | leaf | control | 36.23 | HC |
| SRR6502089 | leaf | control | 35.47 | HC |
| SRR6502090 | leaf | control | 38.01 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 28.35 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 33.20 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 34.24 | HC |
| SRR6502100 | leaf | control | 44.25 | HC |
| SRR6502101 | leaf | control | 38.44 | HC |
| SRR6502102 | leaf | control | 37.04 | HC |
| SRR6168973 | leaf | none (control) | 8.62 | HC |
| SRR6168975 | leaf | none (control) | 10.61 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 22.08 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 21.08 | HC |
| SRR6168979 | leaf | none (control) | 7.30 | HC |
| SRR6168980 | leaf | none (control) | 14.57 | HC |
| SRR6168981 | leaf | none (control) | 7.82 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 5.24 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 4.67 | HC |
| SRR8582891 | panicle | PM | 40.92 | HC |
| SRR8582892 | panicle | PM | 66.89 | HC |
| SRR8582893 | panicle | PM | 66.08 | HC |
| SRR5110439 | panicle | Dawn + 7h | 5.96 | HC |
| SRR5110441 | panicle | Dawn + 10.5h | 7.96 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 9.47 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 8.04 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 19.74 | HC |
| SRR5110445 | panicle | Dusk | 12.79 | HC |
| SRR5110446 | panicle | Dusk | 10.90 | HC |
| SRR5110447 | panicle | Dusk | 18.28 | HC |
| SRR5110448 | panicle | Dusk | 14.45 | HC |
| SRR5110449 | panicle | Dawn + 14h | 14.12 | HC |
| SRR5110450 | panicle | Dawn + 14h | 5.38 | HC |
| SRR5110451 | panicle | Dawn + 14h | 12.02 | HC |
| SRR5110452 | panicle | Dawn + 14h | 9.19 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 6.06 | HC |
| SRR5110454 | panicle | Dawn + 17.5h | 7.90 | HC |
| SRR5110455 | panicle | Dawn + 17.5h | 7.52 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 7.01 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 11.32 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 8.12 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 22.06 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 5.08 | HC |
| SRR5126167 | root | "mock,14_days" | 6.57 | HC |
| SRR1213694 | root | wt | 14.59 | HC |
| SRR1213695 | root | wt | 7.06 | HC |
| SRR1740434 | root_differentiation_zone | wt | 5.63 | HC |
| SRR6441554 | seedling | wild_type | 7.97 | HC |
| SRR6441555 | seedling | wild_type | 6.95 | HC |
| SRR2154086 | seedling | wt | 21.56 | HC |
| SRR2154082 | seedling | wt | 18.57 | HC |
| SRR2154083 | seedling | wt | 6.52 | HC |
| SRR2154084 | seedling | wt | 22.21 | HC |
| SRR2154085 | seedling | wt | 41.29 | HC |
| SRR2154087 | seedling | wt | 23.24 | HC |
| SRR3098741 | seedling | wt | 4.84 | HC |
| SRR3098742 | seedling | wt | 4.10 | HC |
| SRR3098743 | seedling | wt | 3.64 | HC |
| SRR2857720 | seedling | drought_stress_1h | 17.68 | HC |
| SRR2857721 | seedling | drought_stress_6h | 4.42 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 6.68 | HC |
| SRR358791 | seedling | wt | 54.07 | HC |
| SRR358792 | seedling | wt | 53.51 | HC |
| SRR358793 | seedling | wt | 77.07 | HC |
| SRR358794 | seedling | wt | 66.96 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 4.28 | HC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 18.41 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 10.33 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.19 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 26.91 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 28.81 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 23.12 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 17.94 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 18.00 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 16.93 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 5.29 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 4.26 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 5.62 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 14.45 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 13.49 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 23.91 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 30.34 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 10.79 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 8.15 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 9.27 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 10.36 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 23.91 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 31.51 | HC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 5.98 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 4.84 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 9.73 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 3.89 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 2.45 | HC |