| SRR4457249 | 2nd_leaf | DAH4 | 32.11 | HC |
| SRR4457250 | 2nd_leaf | DAH4 | 25.29 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 27.38 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 25.27 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 26.83 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 21.58 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 21.93 | HC |
| SRR4457256 | 2nd_leaf | DAH20 | 19.24 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 20.98 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 19.84 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 19.39 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 24.27 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 43.08 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 42.39 | HC |
| SRR4457263 | 2nd_leaf | DAH36 | 33.36 | HC |
| SRR4457264 | 2nd_leaf | DAH44 | 26.05 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 36.75 | HC |
| SRR4457266 | 2nd_leaf | DAH44 | 21.09 | HC |
| SRR3745125 | anther | wt | 8.95 | HC |
| SRR3745126 | anther | wt | 10.48 | HC |
| SRR3745127 | anther | wt | 7.05 | HC |
| SRR358795 | callus | wt | 61.73 | HC |
| SRR358796 | callus | wt | 59.59 | HC |
| SRR358797 | callus | wt | 83.32 | HC |
| SRR358798 | callus | wt | 78.39 | HC |
| SRR6320473 | carpel | wt | 61.12 | HC |
| SRR6320498 | carpel | wt | 61.45 | HC |
| SRR5560727 | caryopsis | wild_type | 93.45 | HC |
| SRR5560728 | caryopsis | wild_type | 84.72 | HC |
| SRR5560729 | caryopsis | wild_type | 67.64 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 50.36 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 42.78 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 25.58 | HC |
| SRR4947495 | root | control | 34.07 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 32.47 | HC |
| SRR7265400 | coleoptile | 2dA | 29.35 | HC |
| SRR7265401 | coleoptile | 2dA | 28.81 | HC |
| SRR7265402 | coleoptile | 2dA | 27.81 | HC |
| SRR7265403 | coleoptile | 2dN | 44.27 | HC |
| SRR7265404 | coleoptile | 2dN | 38.72 | HC |
| SRR7265405 | coleoptile | 2dN | 35.97 | HC |
| SRR7265406 | coleoptile | 3dA | 20.93 | HC |
| SRR7265407 | coleoptile | 3dA | 21.40 | HC |
| SRR7265408 | coleoptile | 3dA | 15.02 | HC |
| SRR7265409 | coleoptile | 3dN | 37.83 | HC |
| SRR7265410 | coleoptile | 3dN | 34.12 | HC |
| SRR7265411 | coleoptile | 3dN | 32.78 | HC |
| SRR7265412 | coleoptile | 4dA | 15.14 | HC |
| SRR7265413 | coleoptile | 4dA | 25.62 | HC |
| SRR7265414 | coleoptile | 4dA | 19.16 | HC |
| SRR7265415 | coleoptile | 4dN | 43.13 | HC |
| SRR7265416 | coleoptile | 4dN | 40.39 | HC |
| SRR7265417 | coleoptile | 4dN | 38.26 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 18.92 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 20.62 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 17.34 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 12.44 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 15.02 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 9.29 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 16.18 | HC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 12.86 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 15.17 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 9.27 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 15.90 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 11.60 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 17.54 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 18.01 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 17.32 | HC |
| SRR7265373 | embryo | dry seed 0 h | 21.95 | HC |
| SRR7265374 | embryo | dry seed 0 h | 24.38 | HC |
| SRR7265375 | embryo | dry seed 0 h | 7.41 | HC |
| SRR7265376 | embryo | 1hA | 17.04 | HC |
| SRR7265377 | embryo | 1hA | 18.11 | HC |
| SRR7265378 | embryo | 1hA | 19.77 | HC |
| SRR7265379 | embryo | 1hN | 19.09 | HC |
| SRR7265380 | embryo | 1hN | 19.43 | HC |
| SRR7265381 | embryo | 1hN | 20.16 | HC |
| SRR7265382 | embryo | 3hA | 32.46 | HC |
| SRR7265383 | embryo | 3hA | 33.34 | HC |
| SRR7265384 | embryo | 3hA | 30.58 | HC |
| SRR7265385 | embryo | 3hN | 21.97 | HC |
| SRR7265386 | embryo | 3hN | 16.45 | HC |
| SRR7265387 | embryo | 3hN | 18.54 | HC |
| SRR7265388 | embryo | 12hA | 43.77 | HC |
| SRR7265389 | embryo | 12hA | 48.83 | HC |
| SRR7265390 | embryo | 12hA | 45.88 | HC |
| SRR7265391 | embryo | 12hN | 64.69 | HC |
| SRR7265392 | embryo | 12hN | 58.02 | HC |
| SRR7265393 | embryo | 12hN | 57.69 | HC |
| SRR7265394 | embryo | 24hA | 39.59 | HC |
| SRR7265395 | embryo | 24hA | 46.83 | HC |
| SRR7265396 | embryo | 24hA | 41.46 | HC |
| SRR7265397 | embryo | 24hN | 54.44 | HC |
| SRR7265398 | embryo | 24hN | 48.54 | HC |
| SRR7265399 | embryo | 24hN | 48.25 | HC |
| SRR2338866 | endosprem | control | 26.25 | HC |
| SRR2338867 | endosprem | control | 12.70 | HC |
| SRR2338868 | endosprem | high_temperature | 17.43 | HC |
| SRR2338869 | endosprem | high_temperature | 22.38 | HC |
| SRR976168 | flag_leaf | wild_type | 5.16 | HC |
| SRR4457231 | flag_leaf | DAH4 | 20.49 | HC |
| SRR4457232 | flag_leaf | DAH4 | 21.02 | HC |
| SRR4457233 | flag_leaf | DAH4 | 23.03 | HC |
| SRR4457234 | flag_leaf | DAH12 | 14.95 | HC |
| SRR4457235 | flag_leaf | DAH12 | 9.80 | HC |
| SRR4457236 | flag_leaf | DAH12 | 8.92 | HC |
| SRR4457237 | flag_leaf | DAH20 | 10.03 | HC |
| SRR4457238 | flag_leaf | DAH20 | 10.54 | HC |
| SRR4457239 | flag_leaf | DAH20 | 10.41 | HC |
| SRR4457240 | flag_leaf | DAH28 | 10.45 | HC |
| SRR4457241 | flag_leaf | DAH28 | 8.56 | HC |
| SRR4457242 | flag_leaf | DAH28 | 12.77 | HC |
| SRR4457243 | flag_leaf | DAH36 | 38.58 | HC |
| SRR4457244 | flag_leaf | DAH36 | 31.01 | HC |
| SRR4457245 | flag_leaf | DAH36 | 33.23 | HC |
| SRR4457246 | flag_leaf | DAH44 | 24.71 | HC |
| SRR4457247 | flag_leaf | DAH44 | 20.43 | HC |
| SRR4457248 | flag_leaf | DAH44 | 23.23 | HC |
| SRR1213690 | flower | wt(flower buds) | 59.32 | HC |
| SRR1213691 | flower | wt | 54.66 | HC |
| SRR8060835 | leaf | wild_type | 33.91 | HC |
| SRR8060836 | leaf | wild_type | 41.92 | HC |
| SRR8060837 | leaf | wild_type | 37.93 | HC |
| SRR8240824 | leaf | wild_type | 4.50 | HC |
| SRR8240825 | leaf | wild_type | 3.12 | HC |
| SRR8240826 | leaf | wild_type | 3.16 | HC |
| SRR8240818 | leaf | wild_type | 3.19 | HC |
| SRR8240819 | leaf | wild_type | 3.38 | HC |
| SRR8240820 | leaf | wild_type | 4.23 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 33.58 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 41.60 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 26.93 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 35.13 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 116.73 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 74.44 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 102.53 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 85.05 | HC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 75.53 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 100.92 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 94.12 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 77.41 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 90.42 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 124.14 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 86.63 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 115.05 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 71.05 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 81.21 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 82.81 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 67.28 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 60.28 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 72.01 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 99.22 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 84.02 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 93.37 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 137.95 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 87.23 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 92.53 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 145.24 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 68.90 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 82.40 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 113.30 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 112.74 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 92.40 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 83.85 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 86.19 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 81.84 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 126.01 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 120.44 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 122.18 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 56.92 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 55.19 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 95.81 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 98.99 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 56.91 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 55.19 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 95.81 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 99.00 | HC |
| SRR1761528 | leaf | drought | 56.91 | HC |
| SRR1761529 | leaf | drought | 55.19 | HC |
| SRR1761530 | leaf | control | 95.81 | HC |
| SRR1761531 | leaf | control | 98.99 | HC |
| SRR504365 | leaf | wt | 101.89 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 4.42 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 5.65 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 6.42 | HC |
| SRR6417967 | leaf | H2O_control | 13.74 | HC |
| SRR6417968 | leaf | H2O_control | 9.56 | HC |
| SRR6417969 | leaf | H2O_control | 19.17 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 11.75 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 12.79 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 17.88 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 22.61 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 12.31 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 14.72 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 21.92 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 18.83 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 17.16 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 20.45 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 11.00 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 27.48 | HC |
| SRR8611900 | leaf | Non-inoculated | 39.42 | HC |
| SRR8611901 | leaf | Non-inoculated | 40.96 | HC |
| SRR8611902 | leaf | Non-inoculated | 35.70 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 38.53 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 51.25 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 40.09 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 58.51 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 55.89 | HC |
| SRR1213692 | leaf | wt | 111.36 | HC |
| SRR1213693 | leaf | wt | 83.83 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 28.77 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 33.58 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 37.48 | HC |
| SRR6502088 | leaf | control | 28.22 | HC |
| SRR6502089 | leaf | control | 30.72 | HC |
| SRR6502090 | leaf | control | 24.79 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 49.66 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 48.63 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 48.22 | HC |
| SRR6502100 | leaf | control | 31.76 | HC |
| SRR6502101 | leaf | control | 26.08 | HC |
| SRR6502102 | leaf | control | 32.29 | HC |
| SRR5856927 | leaf | control | 5.75 | HC |
| SRR5856928 | leaf | control | 6.97 | HC |
| SRR5856929 | leaf | control | 5.27 | HC |
| SRR5856930 | leaf | salt | 5.76 | HC |
| SRR5856931 | leaf | salt | 6.07 | HC |
| SRR5856932 | leaf | salt | 4.78 | HC |
| SRR5856933 | leaf | control | 8.01 | HC |
| SRR5856934 | leaf | control | 7.14 | HC |
| SRR5856935 | leaf | control | 11.69 | HC |
| SRR5856936 | leaf | salt | 6.36 | HC |
| SRR5856937 | leaf | salt | 5.73 | HC |
| SRR5856938 | leaf | salt | 5.88 | HC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 25.16 | HC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 33.60 | HC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 39.50 | HC |
| SRR6053395 | leaf | gibberellic acid (GA) | 44.83 | HC |
| SRR6053396 | leaf | gibberellic acid (GA) | 68.12 | HC |
| SRR6053397 | leaf | gibberellic acid (GA) | 51.77 | HC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 47.41 | HC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 22.88 | HC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 34.75 | HC |
| SRR6168973 | leaf | none (control) | 42.05 | HC |
| SRR6168974 | leaf | none (control) | 34.63 | HC |
| SRR6168975 | leaf | none (control) | 33.21 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 73.18 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 2.90 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 79.07 | HC |
| SRR6168979 | leaf | none (control) | 2.23 | HC |
| SRR6168980 | leaf | none (control) | 4.86 | HC |
| SRR6168981 | leaf | none (control) | 14.44 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 13.32 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 24.33 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 19.70 | HC |
| SRR8582888 | panicle | AM | 31.72 | HC |
| SRR8582889 | panicle | AM | 14.24 | HC |
| SRR8582890 | panicle | AM | 33.59 | HC |
| SRR8582891 | panicle | PM | 123.27 | HC |
| SRR8582892 | panicle | PM | 223.63 | HC |
| SRR8582893 | panicle | PM | 96.62 | HC |
| SRR5110429 | panicle | Dawn | 47.48 | HC |
| SRR5110430 | panicle | Dawn | 40.63 | HC |
| SRR5110431 | panicle | Dawn | 45.50 | HC |
| SRR5110432 | panicle | Dawn | 28.86 | HC |
| SRR4947496 | root | control | 27.22 | HC |
| SRR5110433 | panicle | Dawn + 3.5h | 36.81 | HC |
| SRR5110434 | panicle | Dawn + 3.5h | 37.20 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 34.02 | HC |
| SRR5110436 | panicle | Dawn + 3.5h | 34.77 | HC |
| SRR5110437 | panicle | Dawn + 7h | 44.00 | HC |
| SRR5110438 | panicle | Dawn + 7h | 58.07 | HC |
| SRR5110439 | panicle | Dawn + 7h | 29.27 | HC |
| SRR5110440 | panicle | Dawn + 7h | 52.85 | HC |
| SRR5110441 | panicle | Dawn + 10.5h | 41.30 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 47.00 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 48.10 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 62.69 | HC |
| SRR5110445 | panicle | Dusk | 52.12 | HC |
| SRR5110446 | panicle | Dusk | 55.15 | HC |
| SRR5110447 | panicle | Dusk | 47.00 | HC |
| SRR5110448 | panicle | Dusk | 78.91 | HC |
| SRR5110449 | panicle | Dawn + 14h | 52.24 | HC |
| SRR5110450 | panicle | Dawn + 14h | 40.05 | HC |
| SRR5110451 | panicle | Dawn + 14h | 41.91 | HC |
| SRR5110452 | panicle | Dawn + 14h | 56.42 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 30.48 | HC |
| SRR5110454 | panicle | Dawn + 17.5h | 26.76 | HC |
| SRR5110455 | panicle | Dawn + 17.5h | 35.25 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 53.60 | HC |
| SRR5110457 | panicle | Dawn + 21h | 44.45 | HC |
| SRR5110458 | panicle | Dawn + 21h | 23.93 | HC |
| SRR5110459 | panicle | Dawn + 21h | 31.58 | HC |
| SRR5110460 | panicle | Dawn + 21h | 44.50 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 24.73 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 3.95 | HC |
| SRR1633182 | panicle | WT | 52.03 | HC |
| SRR1633185 | panicle | WT | 71.01 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 31.19 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 38.18 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 54.82 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 56.73 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 136.15 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 132.12 | HC |
| SRR5126147 | root | "mock,1_day" | 27.84 | HC |
| SRR5126148 | root | "mock,1_day" | 21.27 | HC |
| SRR5126149 | root | "mock,1_day" | 31.99 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 35.47 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 35.54 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 25.77 | HC |
| SRR5126153 | root | "mock,7_days" | 36.57 | HC |
| SRR5126155 | root | "mock,7_days" | 36.18 | HC |
| SRR5126157 | root | "mock,7_days" | 69.86 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 39.58 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 49.43 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 37.87 | HC |
| SRR5126165 | root | "mock,14_days" | 34.89 | HC |
| SRR5126167 | root | "mock,14_days" | 21.24 | HC |
| SRR5126169 | root | "mock,14_days" | 44.86 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 44.23 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 35.94 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 78.44 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 3.49 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 4.26 | HC |
| SRR1213694 | root | wt | 13.69 | HC |
| SRR1213695 | root | wt | 123.53 | HC |
| SRR4947478 | root | control | 25.52 | HC |
| SRR4947479 | root | control | 28.15 | HC |
| SRR4947480 | root | control | 40.88 | HC |
| SRR4947481 | root | control | 63.08 | HC |
| SRR4947482 | root | Al | 21.67 | HC |
| SRR4947483 | root | Al | 28.96 | HC |
| SRR4947484 | root | Al | 33.66 | HC |
| SRR4947485 | root | Al | 47.77 | HC |
| SRR4947487 | root | control | 24.92 | HC |
| SRR4947488 | root | control | 30.36 | HC |
| SRR4947489 | root | control | 30.63 | HC |
| SRR4947490 | root | Al | 27.31 | HC |
| SRR4947491 | root | Al | 47.36 | HC |
| SRR4947492 | root | Al | 34.04 | HC |
| SRR4947493 | root | Al | 24.30 | HC |
| SRR4947494 | root | control | 24.55 | HC |
| SRR4947497 | root | control | 64.64 | HC |
| SRR4947498 | root | Al | 47.33 | HC |
| SRR4947499 | root | Al | 32.27 | HC |
| SRR4947500 | root | Al | 45.62 | HC |
| SRR4947501 | root | Al | 68.02 | HC |
| SRR4947502 | root | control | 46.29 | HC |
| SRR4947503 | root | control | 38.48 | HC |
| SRR4947504 | root | control | 40.67 | HC |
| SRR4947505 | root | control | 50.21 | HC |
| SRR4947506 | root | Al | 27.12 | HC |
| SRR4947507 | root | Al | 57.38 | HC |
| SRR4947508 | root | Al | 36.51 | HC |
| SRR4947509 | root | Al | 37.51 | HC |
| SRR6502091 | root | 100 mM NaCl | 39.14 | HC |
| SRR6502092 | root | 100 mM NaCl | 38.55 | HC |
| SRR6502093 | root | 100 mM NaCl | 51.44 | HC |
| SRR6502094 | root | control | 23.61 | HC |
| SRR6502095 | root | control | 26.96 | HC |
| SRR6502096 | root | control | 21.32 | HC |
| SRR6502103 | root | 100 mM NaCl | 35.34 | HC |
| SRR6502104 | root | 100 mM NaCl | 40.82 | HC |
| SRR6502105 | root | 100 mM NaCl | 32.51 | HC |
| SRR6502106 | root | control | 22.40 | HC |
| SRR6502107 | root | control | 25.30 | HC |
| SRR6502108 | root | control | 29.51 | HC |
| SRR1740434 | root_differentiation_zone | wt | 6.50 | HC |
| SRR1740435 | root_differentiation_zone | wt | 7.53 | HC |
| SRR1740436 | root_differentiation_zone | wt | 20.04 | HC |
| SRR1740431 | root_elongation_zone | wt | 10.03 | HC |
| SRR1740432 | root_elongation_zone | wt | 24.83 | HC |
| SRR1740433 | root_elongation_zone | wt | 22.80 | HC |
| SRR1740428 | root_meristematic_zone | wt | 11.15 | HC |
| SRR1740429 | root_meristematic_zone | wt | 14.15 | HC |
| SRR1740430 | root_meristematic_zone | wt | 17.44 | HC |
| SRR6441554 | seedling | wild_type | 26.22 | HC |
| SRR6441555 | seedling | wild_type | 29.79 | HC |
| SRR2154086 | seedling | wt | 64.96 | HC |
| SRR2154082 | seedling | wt | 40.27 | HC |
| SRR2154083 | seedling | wt | 36.65 | HC |
| SRR2154084 | seedling | wt | 49.91 | HC |
| SRR2154085 | seedling | wt | 69.67 | HC |
| SRR2154087 | seedling | wt | 64.90 | HC |
| SRR3098741 | seedling | wt | 18.53 | HC |
| SRR3098742 | seedling | wt | 19.35 | HC |
| SRR3098743 | seedling | wt | 18.90 | HC |
| SRR2857719 | seedling | drought_stress_0h | 41.60 | HC |
| SRR2857720 | seedling | drought_stress_1h | 35.73 | HC |
| SRR2857721 | seedling | drought_stress_6h | 22.96 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 16.83 | HC |
| SRR1944583 | seedling | no_treatment | 29.82 | HC |
| SRR358791 | seedling | wt | 127.45 | HC |
| SRR358792 | seedling | wt | 118.95 | HC |
| SRR358793 | seedling | wt | 148.05 | HC |
| SRR358794 | seedling | wt | 137.31 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 7.88 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 15.41 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 9.30 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 8.36 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.71 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 11.92 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 8.03 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 12.66 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 18.37 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 18.26 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 15.25 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 35.93 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 31.05 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 39.21 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 45.57 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 45.61 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 31.52 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 36.92 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 44.27 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 35.95 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 29.87 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 54.36 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 50.75 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 43.76 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 39.72 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 36.42 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 35.09 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 36.46 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 34.48 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 17.04 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 14.35 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 9.91 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 11.41 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 7.44 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 7.47 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 17.75 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 22.61 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 37.36 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 32.59 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 71.59 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 75.47 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 69.23 | HC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 91.28 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 113.68 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 94.87 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 82.90 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 87.18 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 83.39 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 66.37 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 75.82 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 80.87 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 82.07 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 89.15 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 95.80 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 87.73 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 100.47 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 92.59 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 97.54 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 105.65 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 83.59 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 101.85 | HC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 121.88 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 27.88 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 29.70 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 44.94 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 49.46 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 41.27 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 41.60 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 41.29 | HC |
| SRR1617559 | shoot_apical_meristem | no collect | 33.31 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 47.53 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 37.63 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 30.24 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 50.28 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 38.88 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 48.30 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 23.87 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 26.01 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 18.51 | HC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 34.57 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 33.12 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 36.03 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 33.14 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 36.39 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 31.95 | HC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 25.32 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 30.21 | HC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 27.40 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 27.58 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 24.41 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 21.44 | HC |